RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 DNMT1P26358 1616 aaKnown RBP32.95■■■□□ 2.87
LMBR1-210ENST00000434503 ILDR2Q71H61 639 aa32.94■■■□□ 2.86
LMBR1-210ENST00000434503 FBXO31Q5XUX0 539 aaPredicted RBP32.93■■■□□ 2.86
LMBR1-210ENST00000434503 KDM5DQ9BY66 1539 aa32.91■■■□□ 2.86
LMBR1-210ENST00000434503 TNRQ92752 1358 aa32.9■■■□□ 2.86
LMBR1-210ENST00000434503 FAM135AQ9P2D6 1515 aa32.9■■■□□ 2.86
LMBR1-210ENST00000434503 PZPP20742 1482 aa32.89■■■□□ 2.86
LMBR1-210ENST00000434503 WASHC2CQ9Y4E1 1318 aa32.89■■■□□ 2.86
LMBR1-210ENST00000434503 ARHGEF5Q12774 1597 aa32.88■■■□□ 2.85
LMBR1-210ENST00000434503 UBAP1LF5GYI3 381 aa32.88■■■□□ 2.85
LMBR1-210ENST00000434503 SPATA31D1Q6ZQQ2 1576 aa32.87■■■□□ 2.85
LMBR1-210ENST00000434503 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
LMBR1-210ENST00000434503 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
LMBR1-210ENST00000434503 POLR1AO95602 1720 aaPredicted RBP32.82■■■□□ 2.84
LMBR1-210ENST00000434503 LRRC9Q6ZRR7 1453 aa32.81■■■□□ 2.84
LMBR1-210ENST00000434503 NEURL4Q96JN8 1562 aa32.79■■■□□ 2.84
LMBR1-210ENST00000434503 VPS8Q8N3P4 1428 aa32.79■■■□□ 2.84
LMBR1-210ENST00000434503 MIA2Q96PC5 1412 aa32.78■■■□□ 2.84
LMBR1-210ENST00000434503 SOCS7O14512 581 aa32.78■■■□□ 2.84
LMBR1-210ENST00000434503 NLRP1Q9C000 1473 aa32.75■■■□□ 2.83
LMBR1-210ENST00000434503 THEMISQ8N1K5 641 aaPredicted RBP32.75■■■□□ 2.83
LMBR1-210ENST00000434503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.74■■■□□ 2.834e-7■■■■□ 21.6
LMBR1-210ENST00000434503 ANKLE2Q86XL3 938 aa32.74■■■□□ 2.83
LMBR1-210ENST00000434503 MAST1Q9Y2H9 1570 aa32.73■■■□□ 2.83
LMBR1-210ENST00000434503 RNF17Q9BXT8 1623 aaKnown RBP32.71■■■□□ 2.83
LMBR1-210ENST00000434503 UGGT1Q9NYU2 1555 aa32.7■■■□□ 2.83
LMBR1-210ENST00000434503 SHANK2Q9UPX8 1470 aa32.7■■■□□ 2.83
LMBR1-210ENST00000434503 KANK4Q5T7N3 995 aaPredicted RBP32.7■■■□□ 2.83
LMBR1-210ENST00000434503 CPS1P31327 1500 aa32.7■■■□□ 2.83
LMBR1-210ENST00000434503 ABCC3O15438 1527 aa32.67■■■□□ 2.82
LMBR1-210ENST00000434503 MAP3K1Q13233 1512 aa32.67■■■□□ 2.82
LMBR1-210ENST00000434503 ZC3H13Q5T200 1668 aaKnown RBP32.66■■■□□ 2.82
LMBR1-210ENST00000434503 EIF2AK4Q9P2K8 1649 aaKnown RBP32.65■■■□□ 2.82
LMBR1-210ENST00000434503 MED14O60244 1454 aa32.64■■■□□ 2.82
LMBR1-210ENST00000434503 MYOM3Q5VTT5 1437 aa32.64■■■□□ 2.82
LMBR1-210ENST00000434503 DEPDC5O75140 1603 aa32.63■■■□□ 2.81
LMBR1-210ENST00000434503 VWDEQ8N2E2 1590 aa32.62■■■□□ 2.81
LMBR1-210ENST00000434503 NPHP4O75161 1426 aaPredicted RBP32.62■■■□□ 2.81
LMBR1-210ENST00000434503 TOM1O60784 492 aa32.61■■■□□ 2.81
LMBR1-210ENST00000434503 MROH1Q8NDA8 1641 aa32.59■■■□□ 2.81
LMBR1-210ENST00000434503 SCAF1Q9H7N4 1312 aaKnown RBP32.58■■■□□ 2.81
LMBR1-210ENST00000434503 PIP4K2BP78356 416 aa32.58■■■□□ 2.81
LMBR1-210ENST00000434503 ERVK-7P63135 1459 aa32.57■■■□□ 2.8
LMBR1-210ENST00000434503 HSPA1LP34931 641 aa32.55■■■□□ 2.8
LMBR1-210ENST00000434503 IQGAP1P46940 1657 aa32.55■■■□□ 2.8
LMBR1-210ENST00000434503 DUOX2Q9NRD8 1548 aa32.55■■■□□ 2.8
LMBR1-210ENST00000434503 CEP152O94986 1710 aa32.53■■■□□ 2.8
LMBR1-210ENST00000434503 CFAP65Q6ZU64 1925 aaKnown RBP32.52■■■□□ 2.8
LMBR1-210ENST00000434503 KIF15Q9NS87 1388 aa32.46■■■□□ 2.79
LMBR1-210ENST00000434503 UBR1Q8IWV7 1749 aa32.46■■■□□ 2.79
LMBR1-210ENST00000434503 STRCP1A6NGW2 1772 aa32.45■■■□□ 2.78
LMBR1-210ENST00000434503 ABCC5O15440 1437 aa32.44■■■□□ 2.78
LMBR1-210ENST00000434503 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
LMBR1-210ENST00000434503 APLP2Q06481 763 aa32.43■■■□□ 2.78
LMBR1-210ENST00000434503 CROCC2H7BZ55 1655 aa32.43■■■□□ 2.78
LMBR1-210ENST00000434503 PRDM15P57071 1507 aaPredicted RBP32.42■■■□□ 2.78
LMBR1-210ENST00000434503 RRP7BPQ9NSQ0 103 aa32.42■■■□□ 2.78
LMBR1-210ENST00000434503 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
LMBR1-210ENST00000434503 ERBINQ96RT1 1412 aa32.42■■■□□ 2.78
LMBR1-210ENST00000434503 PTPN23Q9H3S7 1636 aa32.41■■■□□ 2.78
LMBR1-210ENST00000434503 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
LMBR1-210ENST00000434503 MED1Q15648 1581 aaPredicted RBP32.39■■■□□ 2.78
LMBR1-210ENST00000434503 SCAF11Q99590 1463 aaKnown RBP32.38■■■□□ 2.77
LMBR1-210ENST00000434503 LTKP29376 864 aa32.37■■■□□ 2.77
LMBR1-210ENST00000434503 ARHGAP23Q9P227 1491 aa32.36■■■□□ 2.77
LMBR1-210ENST00000434503 SYNMO15061 1565 aa32.36■■■□□ 2.77
LMBR1-210ENST00000434503 SLIT1O75093 1534 aa32.36■■■□□ 2.77
LMBR1-210ENST00000434503 DAPK1P53355 1430 aa32.35■■■□□ 2.77
LMBR1-210ENST00000434503 TXNDC2Q86VQ3 553 aa32.35■■■□□ 2.77
LMBR1-210ENST00000434503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.35■■■□□ 2.771e-6■■□□□ 12
LMBR1-210ENST00000434503 FGD6Q6ZV73 1430 aa32.31■■■□□ 2.76
LMBR1-210ENST00000434503 KANK1Q14678 1352 aa32.3■■■□□ 2.76
LMBR1-210ENST00000434503 EID1Q9Y6B2 187 aa32.29■■■□□ 2.76
LMBR1-210ENST00000434503 PIK3C2BO00750 1634 aa32.29■■■□□ 2.76
LMBR1-210ENST00000434503 CHIC2Q9UKJ5 165 aa32.26■■■□□ 2.75
LMBR1-210ENST00000434503 ANKRD30AQ9BXX3 1397 aa32.25■■■□□ 2.75
LMBR1-210ENST00000434503 TMEM2Q9UHN6 1383 aa32.24■■■□□ 2.75
LMBR1-210ENST00000434503 LMTK2Q8IWU2 1503 aa32.23■■■□□ 2.75
LMBR1-210ENST00000434503 STAG3Q9UJ98 1225 aa32.23■■■□□ 2.75
LMBR1-210ENST00000434503 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
LMBR1-210ENST00000434503 IDI1Q13907 227 aa32.2■■■□□ 2.75
LMBR1-210ENST00000434503 KDM5AP29375 1690 aaKnown RBP32.2■■■□□ 2.74
LMBR1-210ENST00000434503 XIRP1Q702N8 1843 aaKnown RBP32.19■■■□□ 2.74
LMBR1-210ENST00000434503 EFCAB6Q5THR3 1501 aa32.18■■■□□ 2.74
LMBR1-210ENST00000434503 PHF23Q9BUL5 403 aaPredicted RBP32.17■■■□□ 2.74
LMBR1-210ENST00000434503 NOS1P29475 1434 aa32.12■■■□□ 2.73
LMBR1-210ENST00000434503 ADGRL2O95490 1459 aa32.1■■■□□ 2.73
LMBR1-210ENST00000434503 KCNA6P17658 529 aa32.08■■■□□ 2.73
LMBR1-210ENST00000434503 TET3O43151 1660 aa32.08■■■□□ 2.73
LMBR1-210ENST00000434503 SLC26A8Q96RN1 970 aa32.07■■■□□ 2.72
LMBR1-210ENST00000434503 SLC52A1Q9NWF4 448 aa32.06■■■□□ 2.72
LMBR1-210ENST00000434503 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
LMBR1-210ENST00000434503 FAM50AQ14320 339 aaKnown RBP32.05■■■□□ 2.72
LMBR1-210ENST00000434503 TMEM94Q12767 1356 aa32.05■■■□□ 2.72
LMBR1-210ENST00000434503 FAM135BQ49AJ0 1406 aa32.03■■■□□ 2.72
LMBR1-210ENST00000434503 ANKRD50Q9ULJ7 1429 aa32.02■■■□□ 2.72
LMBR1-210ENST00000434503 RPRD2Q5VT52 1461 aaKnown RBP32■■■□□ 2.71
LMBR1-210ENST00000434503 PROSER2Q86WR7 435 aaPredicted RBP32■■■□□ 2.71
LMBR1-210ENST00000434503 RBM33Q96EV2 1170 aaKnown RBP31.96■■■□□ 2.71
LMBR1-210ENST00000434503 BCANQ96GW7 911 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms