RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 FAM135AQ9P2D6 1515 aa31.74■■■□□ 2.67
HLA-B-250ENST00000434333 CEP170BQ9Y4F5 1589 aaPredicted RBP31.73■■■□□ 2.67
HLA-B-250ENST00000434333 KDM5DQ9BY66 1539 aa31.72■■■□□ 2.67
HLA-B-250ENST00000434333 PZPP20742 1482 aa31.65■■■□□ 2.66
HLA-B-250ENST00000434333 RNF17Q9BXT8 1623 aaKnown RBP31.65■■■□□ 2.66
HLA-B-250ENST00000434333 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
HLA-B-250ENST00000434333 EIF2AK4Q9P2K8 1649 aaKnown RBP31.62■■■□□ 2.65
HLA-B-250ENST00000434333 PTPN23Q9H3S7 1636 aa31.61■■■□□ 2.65
HLA-B-250ENST00000434333 A2ML1A8K2U0 1454 aa31.61■■■□□ 2.65
HLA-B-250ENST00000434333 APLP2Q06481 763 aa31.61■■■□□ 2.65
HLA-B-250ENST00000434333 FBXO31Q5XUX0 539 aaPredicted RBP31.61■■■□□ 2.65
HLA-B-250ENST00000434333 LTBP4Q8N2S1 1624 aa31.6■■■□□ 2.65
HLA-B-250ENST00000434333 TCOF1Q13428 1488 aaKnown RBP31.6■■■□□ 2.65
HLA-B-250ENST00000434333 WASHC2CQ9Y4E1 1318 aa31.6■■■□□ 2.65
HLA-B-250ENST00000434333 CROCC2H7BZ55 1655 aa31.59■■■□□ 2.65
HLA-B-250ENST00000434333 DNMT1P26358 1616 aaKnown RBP31.59■■■□□ 2.65
HLA-B-250ENST00000434333 NCKAP5LQ9HCH0 1330 aa31.58■■■□□ 2.65
HLA-B-250ENST00000434333 MROH1Q8NDA8 1641 aa31.58■■■□□ 2.65
HLA-B-250ENST00000434333 ABCC5O15440 1437 aa31.58■■■□□ 2.65
HLA-B-250ENST00000434333 TNRQ92752 1358 aa31.57■■■□□ 2.64
HLA-B-250ENST00000434333 SHANK2Q9UPX8 1470 aa31.56■■■□□ 2.64
HLA-B-250ENST00000434333 FGD6Q6ZV73 1430 aa31.55■■■□□ 2.64
HLA-B-250ENST00000434333 ABCC3O15438 1527 aa31.54■■■□□ 2.64
HLA-B-250ENST00000434333 DUOX2Q9NRD8 1548 aa31.54■■■□□ 2.64
HLA-B-250ENST00000434333 ZC3H13Q5T200 1668 aaKnown RBP31.54■■■□□ 2.64
HLA-B-250ENST00000434333 PKD2Q13563 968 aa31.52■■■□□ 2.64
HLA-B-250ENST00000434333 DAPK1P53355 1430 aa31.5■■■□□ 2.63
HLA-B-250ENST00000434333 KIF15Q9NS87 1388 aa31.48■■■□□ 2.63
HLA-B-250ENST00000434333 CEP152O94986 1710 aa31.46■■■□□ 2.63
HLA-B-250ENST00000434333 NLRP1Q9C000 1473 aa31.46■■■□□ 2.63
HLA-B-250ENST00000434333 SPATA31D1Q6ZQQ2 1576 aa31.45■■■□□ 2.63
HLA-B-250ENST00000434333 ERBINQ96RT1 1412 aa31.44■■■□□ 2.62
HLA-B-250ENST00000434333 IQSEC2Q5JU85 1478 aa31.43■■■□□ 2.62
HLA-B-250ENST00000434333 PRDM15P57071 1507 aaPredicted RBP31.43■■■□□ 2.62
HLA-B-250ENST00000434333 ZNF335Q9H4Z2 1342 aaPredicted RBP31.43■■■□□ 2.62
HLA-B-250ENST00000434333 NEURL4Q96JN8 1562 aa31.43■■■□□ 2.62
HLA-B-250ENST00000434333 POLR1AO95602 1720 aaPredicted RBP31.42■■■□□ 2.62
HLA-B-250ENST00000434333 RRP7BPQ9NSQ0 103 aa31.41■■■□□ 2.62
HLA-B-250ENST00000434333 ERVK-7P63135 1459 aa31.4■■■□□ 2.62
HLA-B-250ENST00000434333 UGGT1Q9NYU2 1555 aa31.39■■■□□ 2.62
HLA-B-250ENST00000434333 DEPDC5O75140 1603 aa31.38■■■□□ 2.61
HLA-B-250ENST00000434333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.36■■■□□ 2.61
HLA-B-250ENST00000434333 THEMISQ8N1K5 641 aaPredicted RBP31.32■■■□□ 2.6
HLA-B-250ENST00000434333 ARHGAP31Q2M1Z3 1444 aa31.32■■■□□ 2.6
HLA-B-250ENST00000434333 ANKRD30AQ9BXX3 1397 aa31.31■■■□□ 2.6
HLA-B-250ENST00000434333 CHIC2Q9UKJ5 165 aa31.31■■■□□ 2.6
HLA-B-250ENST00000434333 ADGRL2O95490 1459 aa31.3■■■□□ 2.6
HLA-B-250ENST00000434333 CFAP65Q6ZU64 1925 aaKnown RBP31.29■■■□□ 2.6
HLA-B-250ENST00000434333 MED14O60244 1454 aa31.27■■■□□ 2.6
HLA-B-250ENST00000434333 ANKLE2Q86XL3 938 aa31.27■■■□□ 2.6
HLA-B-250ENST00000434333 VWDEQ8N2E2 1590 aa31.26■■■□□ 2.59
HLA-B-250ENST00000434333 UBR1Q8IWV7 1749 aa31.24■■■□□ 2.59
HLA-B-250ENST00000434333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.23■■■□□ 2.59
HLA-B-250ENST00000434333 LMTK2Q8IWU2 1503 aa31.23■■■□□ 2.59
HLA-B-250ENST00000434333 NPHP4O75161 1426 aaPredicted RBP31.23■■■□□ 2.59
HLA-B-250ENST00000434333 FAM50AQ14320 339 aaKnown RBP31.22■■■□□ 2.59
HLA-B-250ENST00000434333 KANK1Q14678 1352 aa31.19■■■□□ 2.58
HLA-B-250ENST00000434333 IQGAP1P46940 1657 aa31.19■■■□□ 2.58
HLA-B-250ENST00000434333 CPS1P31327 1500 aa31.17■■■□□ 2.58
HLA-B-250ENST00000434333 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.58
HLA-B-250ENST00000434333 PIK3C2BO00750 1634 aa31.13■■■□□ 2.57
HLA-B-250ENST00000434333 SLIT1O75093 1534 aa31.13■■■□□ 2.57
HLA-B-250ENST00000434333 ANKRD50Q9ULJ7 1429 aa31.12■■■□□ 2.57
HLA-B-250ENST00000434333 EFCAB6Q5THR3 1501 aa31.12■■■□□ 2.57
HLA-B-250ENST00000434333 UBAP1LF5GYI3 381 aa31.1■■■□□ 2.57
HLA-B-250ENST00000434333 SYNMO15061 1565 aa31.09■■■□□ 2.57
HLA-B-250ENST00000434333 SCAF11Q99590 1463 aaKnown RBP31.09■■■□□ 2.57
HLA-B-250ENST00000434333 NOS1P29475 1434 aa31.07■■■□□ 2.57
HLA-B-250ENST00000434333 STRCP1A6NGW2 1772 aa31.07■■■□□ 2.56
HLA-B-250ENST00000434333 LTKP29376 864 aa31.05■■■□□ 2.56
HLA-B-250ENST00000434333 KDM5AP29375 1690 aaKnown RBP31.05■■■□□ 2.56
HLA-B-250ENST00000434333 IDI1Q13907 227 aa31.02■■■□□ 2.56
HLA-B-250ENST00000434333 TMEM2Q9UHN6 1383 aa31.01■■■□□ 2.55
HLA-B-250ENST00000434333 UNC13BO14795 1591 aa31■■■□□ 2.55
HLA-B-250ENST00000434333 TXNDC2Q86VQ3 553 aa31■■■□□ 2.55
HLA-B-250ENST00000434333 ROCK1Q13464 1354 aa31■■■□□ 2.55
HLA-B-250ENST00000434333 RPRD2Q5VT52 1461 aaKnown RBP30.99■■■□□ 2.55
HLA-B-250ENST00000434333 TET3O43151 1660 aa30.99■■■□□ 2.55
HLA-B-250ENST00000434333 ALKQ9UM73 1620 aa30.96■■■□□ 2.55
HLA-B-250ENST00000434333 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
HLA-B-250ENST00000434333 ADGRB3O60242 1522 aa30.95■■■□□ 2.55
HLA-B-250ENST00000434333 LRRC7Q96NW7 1537 aa30.95■■■□□ 2.55
HLA-B-250ENST00000434333 STAG3Q9UJ98 1225 aa30.93■■■□□ 2.54
HLA-B-250ENST00000434333 EID1Q9Y6B2 187 aa30.93■■■□□ 2.54
HLA-B-250ENST00000434333 GCC2Q8IWJ2 1684 aa30.93■■■□□ 2.54
HLA-B-250ENST00000434333 DISP3Q9P2K9 1392 aa30.91■■■□□ 2.54
HLA-B-250ENST00000434333 TOM1O60784 492 aa30.9■■■□□ 2.54
HLA-B-250ENST00000434333 SLC52A1Q9NWF4 448 aa30.9■■■□□ 2.54
HLA-B-250ENST00000434333 IQGAP3Q86VI3 1631 aa30.87■■■□□ 2.53
HLA-B-250ENST00000434333 E9PCH4 1651 aa30.87■■■□□ 2.53
HLA-B-250ENST00000434333 PIP4K2BP78356 416 aa30.85■■■□□ 2.53
HLA-B-250ENST00000434333 ITGAEP38570 1179 aa30.84■■■□□ 2.53
HLA-B-250ENST00000434333 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
HLA-B-250ENST00000434333 MYO5BQ9ULV0 1848 aa30.82■■■□□ 2.52
HLA-B-250ENST00000434333 XIRP1Q702N8 1843 aaKnown RBP30.82■■■□□ 2.52
HLA-B-250ENST00000434333 TMEM131LA2VDJ0 1609 aa30.81■■■□□ 2.52
HLA-B-250ENST00000434333 HSPA1LP34931 641 aa30.8■■■□□ 2.52
HLA-B-250ENST00000434333 ZFYVE9O95405 1425 aa30.8■■■□□ 2.52
HLA-B-250ENST00000434333 RRBP1Q9P2E9 1410 aaKnown RBP30.79■■■□□ 2.52
HLA-B-250ENST00000434333 ILDR2Q71H61 639 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms