RNA–Protein interactions for RNA: ENST00000433010.5

PSMD2-204, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 3

Gene PSMD2, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-204	ENST00000433010	GGT6	Q6P531	493 aa		32.46	■■■□□ 2.79
PSMD2-204	ENST00000433010	CLTC	Q00610	1675 aa	Known RBP	32.45	■■■□□ 2.79
PSMD2-204	ENST00000433010	PLXNC1	O60486	1568 aa		32.45	■■■□□ 2.78
PSMD2-204	ENST00000433010	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.43	■■■□□ 2.78
PSMD2-204	ENST00000433010	PPP6R1	Q9UPN7	881 aa		32.43	■■■□□ 2.78
PSMD2-204	ENST00000433010	MYO3A	Q8NEV4	1616 aa		32.43	■■■□□ 2.78
PSMD2-204	ENST00000433010	ZNF142	P52746	1687 aa	Predicted RBP	32.43	■■■□□ 2.78
PSMD2-204	ENST00000433010	FGD6	Q6ZV73	1430 aa		32.43	■■■□□ 2.78
PSMD2-204	ENST00000433010	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.42	■■■□□ 2.78
PSMD2-204	ENST00000433010	PTPN23	Q9H3S7	1636 aa		32.41	■■■□□ 2.78
PSMD2-204	ENST00000433010	TSPY4	P0CV99	314 aa		32.4	■■■□□ 2.78
PSMD2-204	ENST00000433010	TSPY10	P0CW01	314 aa		32.4	■■■□□ 2.78
PSMD2-204	ENST00000433010	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.4	■■■□□ 2.78
PSMD2-204	ENST00000433010	ADGB	Q8N7X0	1667 aa		32.34	■■■□□ 2.77
PSMD2-204	ENST00000433010	A2ML1	A8K2U0	1454 aa		32.3	■■■□□ 2.76
PSMD2-204	ENST00000433010	MAST1	Q9Y2H9	1570 aa		32.28	■■■□□ 2.76
PSMD2-204	ENST00000433010	ABCC5	O15440	1437 aa		32.27	■■■□□ 2.76
PSMD2-204	ENST00000433010	DHX29	Q7Z478	1369 aa	Known RBP	32.27	■■■□□ 2.76
PSMD2-204	ENST00000433010	HSPA1L	P34931	641 aa		32.26	■■■□□ 2.75
PSMD2-204	ENST00000433010	DNMT1	P26358	1616 aa	Known RBP	32.25	■■■□□ 2.75
PSMD2-204	ENST00000433010	FAM50A	Q14320	339 aa	Known RBP	32.24	■■■□□ 2.75
PSMD2-204	ENST00000433010	DAPK1	P53355	1430 aa		32.23	■■■□□ 2.75
PSMD2-204	ENST00000433010	TOM1	O60784	492 aa		32.22	■■■□□ 2.75
PSMD2-204	ENST00000433010	PIP4K2B	P78356	416 aa		32.22	■■■□□ 2.75
PSMD2-204	ENST00000433010	SCAF1	Q9H7N4	1312 aa	Known RBP	32.22	■■■□□ 2.75
PSMD2-204	ENST00000433010	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.21	■■■□□ 2.75
PSMD2-204	ENST00000433010	CROCC2	H7BZ55	1655 aa		32.21	■■■□□ 2.75
PSMD2-204	ENST00000433010	SHANK2	Q9UPX8	1470 aa		32.19	■■■□□ 2.74
PSMD2-204	ENST00000433010	TNR	Q92752	1358 aa		32.19	■■■□□ 2.74
PSMD2-204	ENST00000433010	CPS1	P31327	1500 aa		32.18	■■■□□ 2.74
PSMD2-204	ENST00000433010	KIF3B	O15066	747 aa		32.15	■■■□□ 2.74
PSMD2-204	ENST00000433010	NEURL4	Q96JN8	1562 aa		32.14	■■■□□ 2.74
PSMD2-204	ENST00000433010	ANKLE2	Q86XL3	938 aa		32.13	■■■□□ 2.73
PSMD2-204	ENST00000433010	CHIC2	Q9UKJ5	165 aa		32.13	■■■□□ 2.73
PSMD2-204	ENST00000433010	MED1	Q15648	1581 aa	Predicted RBP	32.12	■■■□□ 2.73
PSMD2-204	ENST00000433010	PZP	P20742	1482 aa		32.11	■■■□□ 2.73
PSMD2-204	ENST00000433010	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.1	■■■□□ 2.73
PSMD2-204	ENST00000433010	RRP7BP	Q9NSQ0	103 aa		32.1	■■■□□ 2.73
PSMD2-204	ENST00000433010	POLR1A	O95602	1720 aa	Predicted RBP	32.09	■■■□□ 2.73
PSMD2-204	ENST00000433010	WASHC2C	Q9Y4E1	1318 aa		32.09	■■■□□ 2.73
PSMD2-204	ENST00000433010	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.08	■■■□□ 2.73	2e-9	■□□□□ 8.2
PSMD2-204	ENST00000433010	KIF15	Q9NS87	1388 aa		32.07	■■■□□ 2.73
PSMD2-204	ENST00000433010	DUOX2	Q9NRD8	1548 aa		32.06	■■■□□ 2.72
PSMD2-204	ENST00000433010	KDM5D	Q9BY66	1539 aa		32.05	■■■□□ 2.72
PSMD2-204	ENST00000433010	ANKRD30A	Q9BXX3	1397 aa		32.05	■■■□□ 2.72
PSMD2-204	ENST00000433010	FAM135A	Q9P2D6	1515 aa		32.05	■■■□□ 2.72
PSMD2-204	ENST00000433010	VWDE	Q8N2E2	1590 aa		32.03	■■■□□ 2.72
PSMD2-204	ENST00000433010	MED14	O60244	1454 aa		32.01	■■■□□ 2.71
PSMD2-204	ENST00000433010	NLRP1	Q9C000	1473 aa		32.01	■■■□□ 2.71
PSMD2-204	ENST00000433010	NPHP4	O75161	1426 aa	Predicted RBP	32	■■■□□ 2.71
PSMD2-204	ENST00000433010	ADGRL2	O95490	1459 aa		32	■■■□□ 2.71
PSMD2-204	ENST00000433010	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32	■■■□□ 2.71
PSMD2-204	ENST00000433010	RRBP1	Q9P2E9	1410 aa	Known RBP	31.97	■■■□□ 2.71
PSMD2-204	ENST00000433010	UGGT1	Q9NYU2	1555 aa		31.97	■■■□□ 2.71
PSMD2-204	ENST00000433010	ERBIN	Q96RT1	1412 aa		31.96	■■■□□ 2.71
PSMD2-204	ENST00000433010	PHF23	Q9BUL5	403 aa	Predicted RBP	31.96	■■■□□ 2.71
PSMD2-204	ENST00000433010	RNF17	Q9BXT8	1623 aa	Known RBP	31.96	■■■□□ 2.71
PSMD2-204	ENST00000433010	ALK	Q9UM73	1620 aa		31.96	■■■□□ 2.71
PSMD2-204	ENST00000433010	ITGAE	P38570	1179 aa		31.95	■■■□□ 2.71
PSMD2-204	ENST00000433010	DEPDC5	O75140	1603 aa		31.95	■■■□□ 2.71
PSMD2-204	ENST00000433010	MROH1	Q8NDA8	1641 aa		31.89	■■■□□ 2.7
PSMD2-204	ENST00000433010	ROCK1	Q13464	1354 aa		31.86	■■■□□ 2.69
PSMD2-204	ENST00000433010	LRRC7	Q96NW7	1537 aa		31.85	■■■□□ 2.69
PSMD2-204	ENST00000433010	IQGAP1	P46940	1657 aa		31.85	■■■□□ 2.69
PSMD2-204	ENST00000433010	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.83	■■■□□ 2.69	5e-8	■■■■□ 20.6
PSMD2-204	ENST00000433010	ANKRD50	Q9ULJ7	1429 aa		31.83	■■■□□ 2.69
PSMD2-204	ENST00000433010	ABCC3	O15438	1527 aa		31.82	■■■□□ 2.68
PSMD2-204	ENST00000433010	SENP3	Q9H4L4	574 aa	Predicted RBP	31.82	■■■□□ 2.68
PSMD2-204	ENST00000433010	STRCP1	A6NGW2	1772 aa		31.8	■■■□□ 2.68
PSMD2-204	ENST00000433010	PRDM15	P57071	1507 aa	Predicted RBP	31.8	■■■□□ 2.68
PSMD2-204	ENST00000433010	ZC3H13	Q5T200	1668 aa	Known RBP	31.8	■■■□□ 2.68
PSMD2-204	ENST00000433010	CEP152	O94986	1710 aa		31.78	■■■□□ 2.68
PSMD2-204	ENST00000433010	KANK1	Q14678	1352 aa		31.75	■■■□□ 2.67
PSMD2-204	ENST00000433010	ERVK-7	P63135	1459 aa		31.75	■■■□□ 2.67
PSMD2-204	ENST00000433010	SYNM	O15061	1565 aa		31.73	■■■□□ 2.67
PSMD2-204	ENST00000433010	RGS17	Q9UGC6	210 aa	Predicted RBP	31.69	■■■□□ 2.66
PSMD2-204	ENST00000433010	SCAF11	Q99590	1463 aa	Known RBP	31.68	■■■□□ 2.66
PSMD2-204	ENST00000433010	LTK	P29376	864 aa		31.68	■■■□□ 2.66
PSMD2-204	ENST00000433010	TXNDC2	Q86VQ3	553 aa		31.67	■■■□□ 2.66
PSMD2-204	ENST00000433010	CFAP65	Q6ZU64	1925 aa	Known RBP	31.67	■■■□□ 2.66
PSMD2-204	ENST00000433010	ARHGAP31	Q2M1Z3	1444 aa		31.64	■■■□□ 2.66
PSMD2-204	ENST00000433010	LMTK2	Q8IWU2	1503 aa		31.64	■■■□□ 2.66
PSMD2-204	ENST00000433010	UBR1	Q8IWV7	1749 aa		31.63	■■■□□ 2.65
PSMD2-204	ENST00000433010	ARHGAP23	Q9P227	1491 aa		31.62	■■■□□ 2.65
PSMD2-204	ENST00000433010	UNC13B	O14795	1591 aa		31.6	■■■□□ 2.65
PSMD2-204	ENST00000433010	SLIT1	O75093	1534 aa		31.6	■■■□□ 2.65
PSMD2-204	ENST00000433010	NAIP	Q13075	1403 aa		31.58	■■■□□ 2.65
PSMD2-204	ENST00000433010	EID1	Q9Y6B2	187 aa		31.58	■■■□□ 2.65
PSMD2-204	ENST00000433010	FAM135B	Q49AJ0	1406 aa		31.55	■■■□□ 2.64
PSMD2-204	ENST00000433010	HFM1	A2PYH4	1435 aa		31.53	■■■□□ 2.64
PSMD2-204	ENST00000433010	GCC2	Q8IWJ2	1684 aa		31.53	■■■□□ 2.64
PSMD2-204	ENST00000433010	EFCAB6	Q5THR3	1501 aa		31.53	■■■□□ 2.64
PSMD2-204	ENST00000433010	NUP155	O75694	1391 aa		31.52	■■■□□ 2.64
PSMD2-204	ENST00000433010	XIRP1	Q702N8	1843 aa	Known RBP	31.52	■■■□□ 2.64
PSMD2-204	ENST00000433010	TMEM2	Q9UHN6	1383 aa		31.5	■■■□□ 2.63
PSMD2-204	ENST00000433010	TET3	O43151	1660 aa		31.5	■■■□□ 2.63
PSMD2-204	ENST00000433010	IQGAP3	Q86VI3	1631 aa		31.49	■■■□□ 2.63
PSMD2-204	ENST00000433010	POTEA	Q6S8J7	498 aa		31.47	■■■□□ 2.63
PSMD2-204	ENST00000433010	TMEM94	Q12767	1356 aa		31.45	■■■□□ 2.63
PSMD2-204	ENST00000433010	STAG3	Q9UJ98	1225 aa		31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms