RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 FBXO41Q8TF61 875 aa24.02■■□□□ 1.44
SF1-208ENST00000432725 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
SF1-208ENST00000432725 PTPN23Q9H3S7 1636 aa24.02■■□□□ 1.44
SF1-208ENST00000432725 PCGF6Q9BYE7 350 aa24.01■■□□□ 1.43
SF1-208ENST00000432725 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
SF1-208ENST00000432725 NCOA1Q15788 1441 aa24■■□□□ 1.43
SF1-208ENST00000432725 PTPRTO14522 1441 aa23.99■■□□□ 1.43
SF1-208ENST00000432725 PZPP20742 1482 aa23.98■■□□□ 1.43
SF1-208ENST00000432725 MYO3AQ8NEV4 1616 aa23.97■■□□□ 1.43
SF1-208ENST00000432725 RNF17Q9BXT8 1623 aaKnown RBP23.97■■□□□ 1.43
SF1-208ENST00000432725 EIF2AK4Q9P2K8 1649 aaKnown RBP23.96■■□□□ 1.43
SF1-208ENST00000432725 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
SF1-208ENST00000432725 DAPK1P53355 1430 aa23.96■■□□□ 1.43
SF1-208ENST00000432725 FBXO31Q5XUX0 539 aaPredicted RBP23.95■■□□□ 1.42
SF1-208ENST00000432725 ZNF142P52746 1687 aaPredicted RBP23.95■■□□□ 1.42
SF1-208ENST00000432725 CAMSAP1Q5T5Y3 1602 aa23.95■■□□□ 1.42
SF1-208ENST00000432725 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
SF1-208ENST00000432725 KIF15Q9NS87 1388 aa23.94■■□□□ 1.42
SF1-208ENST00000432725 CERKQ8TCT0 537 aa23.94■■□□□ 1.42
SF1-208ENST00000432725 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
SF1-208ENST00000432725 CROCC2H7BZ55 1655 aa23.92■■□□□ 1.42
SF1-208ENST00000432725 TNRQ92752 1358 aa23.92■■□□□ 1.42
SF1-208ENST00000432725 A2ML1A8K2U0 1454 aa23.92■■□□□ 1.42
SF1-208ENST00000432725 PLA2R1Q13018 1463 aa23.92■■□□□ 1.42
SF1-208ENST00000432725 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
SF1-208ENST00000432725 ABCC3O15438 1527 aa23.9■■□□□ 1.42
SF1-208ENST00000432725 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
SF1-208ENST00000432725 MROH1Q8NDA8 1641 aa23.89■■□□□ 1.42
SF1-208ENST00000432725 PKD2Q13563 968 aa23.88■■□□□ 1.41
SF1-208ENST00000432725 NCKAP5LQ9HCH0 1330 aa23.87■■□□□ 1.41
SF1-208ENST00000432725 ZC3H13Q5T200 1668 aaKnown RBP23.87■■□□□ 1.41
SF1-208ENST00000432725 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
SF1-208ENST00000432725 ANKRD30AQ9BXX3 1397 aa23.87■■□□□ 1.41
SF1-208ENST00000432725 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
SF1-208ENST00000432725 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
SF1-208ENST00000432725 PRDM15P57071 1507 aaPredicted RBP23.83■■□□□ 1.41
SF1-208ENST00000432725 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
SF1-208ENST00000432725 ADGRL2O95490 1459 aa23.81■■□□□ 1.4
SF1-208ENST00000432725 SPATA31D1Q6ZQQ2 1576 aa23.81■■□□□ 1.4
SF1-208ENST00000432725 LTBP4Q8N2S1 1624 aa23.79■■□□□ 1.4
SF1-208ENST00000432725 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
SF1-208ENST00000432725 ARHGAP31Q2M1Z3 1444 aa23.78■■□□□ 1.4
SF1-208ENST00000432725 THEMISQ8N1K5 641 aaPredicted RBP23.78■■□□□ 1.4
SF1-208ENST00000432725 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
SF1-208ENST00000432725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.75■■□□□ 1.393e-13■■■□□ 18.8
SF1-208ENST00000432725 KANK1Q14678 1352 aa23.75■■□□□ 1.39
SF1-208ENST00000432725 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
SF1-208ENST00000432725 CEP152O94986 1710 aa23.74■■□□□ 1.39
SF1-208ENST00000432725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
SF1-208ENST00000432725 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
SF1-208ENST00000432725 VWDEQ8N2E2 1590 aa23.71■■□□□ 1.39
SF1-208ENST00000432725 LMTK2Q8IWU2 1503 aa23.71■■□□□ 1.39
SF1-208ENST00000432725 ZNF335Q9H4Z2 1342 aaPredicted RBP23.7■■□□□ 1.38
SF1-208ENST00000432725 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
SF1-208ENST00000432725 ANKRD50Q9ULJ7 1429 aa23.69■■□□□ 1.38
SF1-208ENST00000432725 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
SF1-208ENST00000432725 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
SF1-208ENST00000432725 MED14O60244 1454 aa23.66■■□□□ 1.38
SF1-208ENST00000432725 ROCK1Q13464 1354 aa23.65■■□□□ 1.38
SF1-208ENST00000432725 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
SF1-208ENST00000432725 NPHP4O75161 1426 aaPredicted RBP23.62■■□□□ 1.37
SF1-208ENST00000432725 EFCAB6Q5THR3 1501 aa23.6■■□□□ 1.37
SF1-208ENST00000432725 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
SF1-208ENST00000432725 NOS1P29475 1434 aa23.59■■□□□ 1.37
SF1-208ENST00000432725 ARHGAP23Q9P227 1491 aa23.57■■□□□ 1.36
SF1-208ENST00000432725 SLIT1O75093 1534 aa23.57■■□□□ 1.36
SF1-208ENST00000432725 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
SF1-208ENST00000432725 IDI1Q13907 227 aa23.55■■□□□ 1.36
SF1-208ENST00000432725 ITGAEP38570 1179 aa23.54■■□□□ 1.36
SF1-208ENST00000432725 CFAP65Q6ZU64 1925 aaKnown RBP23.54■■□□□ 1.36
SF1-208ENST00000432725 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
SF1-208ENST00000432725 CPS1P31327 1500 aa23.54■■□□□ 1.36
SF1-208ENST00000432725 UNC13BO14795 1591 aa23.53■■□□□ 1.36
SF1-208ENST00000432725 SYNMO15061 1565 aa23.53■■□□□ 1.36
SF1-208ENST00000432725 PIK3C2BO00750 1634 aa23.53■■□□□ 1.36
SF1-208ENST00000432725 LTKP29376 864 aa23.53■■□□□ 1.36
SF1-208ENST00000432725 IQGAP1P46940 1657 aa23.52■■□□□ 1.36
SF1-208ENST00000432725 TXNDC2Q86VQ3 553 aa23.52■■□□□ 1.36
SF1-208ENST00000432725 SLC52A1Q9NWF4 448 aa23.52■■□□□ 1.36
SF1-208ENST00000432725 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
SF1-208ENST00000432725 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
SF1-208ENST00000432725 EID1Q9Y6B2 187 aa23.5■■□□□ 1.35
SF1-208ENST00000432725 TET3O43151 1660 aa23.5■■□□□ 1.35
SF1-208ENST00000432725 KDM5AP29375 1690 aaKnown RBP23.5■■□□□ 1.35
SF1-208ENST00000432725 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
SF1-208ENST00000432725 ADGRB3O60242 1522 aa23.44■■□□□ 1.34
SF1-208ENST00000432725 NUP155O75694 1391 aa23.44■■□□□ 1.34
SF1-208ENST00000432725 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
SF1-208ENST00000432725 GCC2Q8IWJ2 1684 aa23.43■■□□□ 1.34
SF1-208ENST00000432725 HRCP23327 699 aa23.4■■□□□ 1.34
SF1-208ENST00000432725 LRRC7Q96NW7 1537 aa23.38■■□□□ 1.33
SF1-208ENST00000432725 E9PCH4 1651 aa23.38■■□□□ 1.33
SF1-208ENST00000432725 TOM1O60784 492 aa23.37■■□□□ 1.33
SF1-208ENST00000432725 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
SF1-208ENST00000432725 STRCP1A6NGW2 1772 aa23.36■■□□□ 1.33
SF1-208ENST00000432725 NAIPQ13075 1403 aa23.35■■□□□ 1.33
SF1-208ENST00000432725 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
SF1-208ENST00000432725 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.32
SF1-208ENST00000432725 HDGFP51858 240 aaKnown RBP23.32■■□□□ 1.32
SF1-208ENST00000432725 RIMS2Q9UQ26 1411 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms