RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 PKD2Q13563 968 aa25.7■■□□□ 1.7
TTC28-202ENST00000431039 A2ML1A8K2U0 1454 aa25.7■■□□□ 1.7
TTC28-202ENST00000431039 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
TTC28-202ENST00000431039 ARHGEF5Q12774 1597 aa25.69■■□□□ 1.7
TTC28-202ENST00000431039 POLR1AO95602 1720 aaPredicted RBP25.68■■□□□ 1.7
TTC28-202ENST00000431039 FBXO31Q5XUX0 539 aaPredicted RBP25.65■■□□□ 1.7
TTC28-202ENST00000431039 SPATA31D1Q6ZQQ2 1576 aa25.65■■□□□ 1.7
TTC28-202ENST00000431039 FAM135AQ9P2D6 1515 aa25.64■■□□□ 1.7
TTC28-202ENST00000431039 TNRQ92752 1358 aa25.64■■□□□ 1.69
TTC28-202ENST00000431039 PZPP20742 1482 aa25.64■■□□□ 1.69
TTC28-202ENST00000431039 RSPH4AQ5TD94 716 aa25.63■■□□□ 1.69
TTC28-202ENST00000431039 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
TTC28-202ENST00000431039 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
TTC28-202ENST00000431039 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
TTC28-202ENST00000431039 TSPY4P0CV99 314 aa25.59■■□□□ 1.69
TTC28-202ENST00000431039 TSPY10P0CW01 314 aa25.59■■□□□ 1.69
TTC28-202ENST00000431039 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
TTC28-202ENST00000431039 UBAP1LF5GYI3 381 aa25.58■■□□□ 1.69
TTC28-202ENST00000431039 ILDR2Q71H61 639 aa25.58■■□□□ 1.69
TTC28-202ENST00000431039 RNF17Q9BXT8 1623 aaKnown RBP25.57■■□□□ 1.68
TTC28-202ENST00000431039 MAST1Q9Y2H9 1570 aa25.56■■□□□ 1.68
TTC28-202ENST00000431039 ZC3H13Q5T200 1668 aaKnown RBP25.53■■□□□ 1.68
TTC28-202ENST00000431039 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
TTC28-202ENST00000431039 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
TTC28-202ENST00000431039 MIA2Q96PC5 1412 aa25.52■■□□□ 1.68
TTC28-202ENST00000431039 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
TTC28-202ENST00000431039 CEP152O94986 1710 aa25.51■■□□□ 1.68
TTC28-202ENST00000431039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.51■■□□□ 1.67
TTC28-202ENST00000431039 ABCC3O15438 1527 aa25.51■■□□□ 1.67
TTC28-202ENST00000431039 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
TTC28-202ENST00000431039 NLRP1Q9C000 1473 aa25.5■■□□□ 1.67
TTC28-202ENST00000431039 MYOM3Q5VTT5 1437 aa25.49■■□□□ 1.67
TTC28-202ENST00000431039 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
TTC28-202ENST00000431039 ANKLE2Q86XL3 938 aa25.46■■□□□ 1.67
TTC28-202ENST00000431039 CPS1P31327 1500 aa25.46■■□□□ 1.67
TTC28-202ENST00000431039 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
TTC28-202ENST00000431039 DEPDC5O75140 1603 aa25.45■■□□□ 1.67
TTC28-202ENST00000431039 THEMISQ8N1K5 641 aaPredicted RBP25.45■■□□□ 1.66
TTC28-202ENST00000431039 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
TTC28-202ENST00000431039 IQGAP1P46940 1657 aa25.44■■□□□ 1.66
TTC28-202ENST00000431039 VWDEQ8N2E2 1590 aa25.44■■□□□ 1.66
TTC28-202ENST00000431039 CROCC2H7BZ55 1655 aa25.43■■□□□ 1.66
TTC28-202ENST00000431039 SCAF1Q9H7N4 1312 aaKnown RBP25.42■■□□□ 1.66
TTC28-202ENST00000431039 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
TTC28-202ENST00000431039 NPHP4O75161 1426 aaPredicted RBP25.42■■□□□ 1.66
TTC28-202ENST00000431039 DUOX2Q9NRD8 1548 aa25.41■■□□□ 1.66
TTC28-202ENST00000431039 SOCS7O14512 581 aa25.4■■□□□ 1.66
TTC28-202ENST00000431039 MED14O60244 1454 aa25.4■■□□□ 1.66
TTC28-202ENST00000431039 PTPN23Q9H3S7 1636 aa25.38■■□□□ 1.65
TTC28-202ENST00000431039 UBR1Q8IWV7 1749 aa25.38■■□□□ 1.65
TTC28-202ENST00000431039 PIP4K2BP78356 416 aa25.38■■□□□ 1.65
TTC28-202ENST00000431039 STRCP1A6NGW2 1772 aa25.37■■□□□ 1.65
TTC28-202ENST00000431039 KIF15Q9NS87 1388 aa25.34■■□□□ 1.65
TTC28-202ENST00000431039 PRDM15P57071 1507 aaPredicted RBP25.33■■□□□ 1.65
TTC28-202ENST00000431039 TOM1O60784 492 aa25.33■■□□□ 1.65
TTC28-202ENST00000431039 ABCC5O15440 1437 aa25.32■■□□□ 1.64
TTC28-202ENST00000431039 HSPA1LP34931 641 aa25.32■■□□□ 1.64
TTC28-202ENST00000431039 RRP7BPQ9NSQ0 103 aa25.3■■□□□ 1.64
TTC28-202ENST00000431039 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
TTC28-202ENST00000431039 ALKQ9UM73 1620 aa25.28■■□□□ 1.64
TTC28-202ENST00000431039 DAPK1P53355 1430 aa25.28■■□□□ 1.64
TTC28-202ENST00000431039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.27■■□□□ 1.64
TTC28-202ENST00000431039 SYNMO15061 1565 aa25.27■■□□□ 1.64
TTC28-202ENST00000431039 MED1Q15648 1581 aaPredicted RBP25.26■■□□□ 1.63
TTC28-202ENST00000431039 FGD6Q6ZV73 1430 aa25.25■■□□□ 1.63
TTC28-202ENST00000431039 SCAF11Q99590 1463 aaKnown RBP25.25■■□□□ 1.63
TTC28-202ENST00000431039 PIK3C2BO00750 1634 aa25.25■■□□□ 1.63
TTC28-202ENST00000431039 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
TTC28-202ENST00000431039 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
TTC28-202ENST00000431039 SLIT1O75093 1534 aa25.22■■□□□ 1.63
TTC28-202ENST00000431039 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
TTC28-202ENST00000431039 CHIC2Q9UKJ5 165 aa25.2■■□□□ 1.62
TTC28-202ENST00000431039 LTKP29376 864 aa25.19■■□□□ 1.62
TTC28-202ENST00000431039 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
TTC28-202ENST00000431039 KANK1Q14678 1352 aa25.18■■□□□ 1.62
TTC28-202ENST00000431039 TXNDC2Q86VQ3 553 aa25.18■■□□□ 1.62
TTC28-202ENST00000431039 XIRP1Q702N8 1843 aaKnown RBP25.17■■□□□ 1.62
TTC28-202ENST00000431039 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
TTC28-202ENST00000431039 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
TTC28-202ENST00000431039 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
TTC28-202ENST00000431039 EID1Q9Y6B2 187 aa25.13■■□□□ 1.61
TTC28-202ENST00000431039 KDM5AP29375 1690 aaKnown RBP25.13■■□□□ 1.61
TTC28-202ENST00000431039 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
TTC28-202ENST00000431039 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
TTC28-202ENST00000431039 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
TTC28-202ENST00000431039 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
TTC28-202ENST00000431039 IDI1Q13907 227 aa25.07■■□□□ 1.6
TTC28-202ENST00000431039 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
TTC28-202ENST00000431039 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
TTC28-202ENST00000431039 ADGRB3O60242 1522 aa25.05■■□□□ 1.6
TTC28-202ENST00000431039 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
TTC28-202ENST00000431039 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
TTC28-202ENST00000431039 NOS1P29475 1434 aa25.03■■□□□ 1.6
TTC28-202ENST00000431039 TET3O43151 1660 aa25■■□□□ 1.59
TTC28-202ENST00000431039 GCC2Q8IWJ2 1684 aa24.99■■□□□ 1.59
TTC28-202ENST00000431039 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
TTC28-202ENST00000431039 SLC26A8Q96RN1 970 aa24.98■■□□□ 1.59
TTC28-202ENST00000431039 TMEM94Q12767 1356 aa24.96■■□□□ 1.59
TTC28-202ENST00000431039 KCNA6P17658 529 aa24.94■■□□□ 1.58
TTC28-202ENST00000431039 RBM33Q96EV2 1170 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms