RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MAST1Q9Y2H9 1570 aa27■■□□□ 1.91
CPSF4-203ENST00000430038 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
CPSF4-203ENST00000430038 CEP170BQ9Y4F5 1589 aaPredicted RBP26.98■■□□□ 1.91
CPSF4-203ENST00000430038 LTBP4Q8N2S1 1624 aa26.95■■□□□ 1.91
CPSF4-203ENST00000430038 KDM5DQ9BY66 1539 aa26.95■■□□□ 1.9
CPSF4-203ENST00000430038 WASHC2CQ9Y4E1 1318 aa26.92■■□□□ 1.9
CPSF4-203ENST00000430038 DNMT1P26358 1616 aaKnown RBP26.92■■□□□ 1.9
CPSF4-203ENST00000430038 PZPP20742 1482 aa26.91■■□□□ 1.9
CPSF4-203ENST00000430038 RNF17Q9BXT8 1623 aaKnown RBP26.9■■□□□ 1.9
CPSF4-203ENST00000430038 MROH1Q8NDA8 1641 aa26.9■■□□□ 1.9
CPSF4-203ENST00000430038 PTPN23Q9H3S7 1636 aa26.9■■□□□ 1.9
CPSF4-203ENST00000430038 TCOF1Q13428 1488 aaKnown RBP26.89■■□□□ 1.9
CPSF4-203ENST00000430038 ABCC5O15440 1437 aa26.89■■□□□ 1.89
CPSF4-203ENST00000430038 A2ML1A8K2U0 1454 aa26.88■■□□□ 1.89
CPSF4-203ENST00000430038 PLA2R1Q13018 1463 aa26.87■■□□□ 1.89
CPSF4-203ENST00000430038 TNRQ92752 1358 aa26.87■■□□□ 1.89
CPSF4-203ENST00000430038 FAM135AQ9P2D6 1515 aa26.86■■□□□ 1.89
CPSF4-203ENST00000430038 CROCC2H7BZ55 1655 aa26.86■■□□□ 1.89
CPSF4-203ENST00000430038 CFAP65Q6ZU64 1925 aaKnown RBP26.86■■□□□ 1.89
CPSF4-203ENST00000430038 APLP2Q06481 763 aa26.85■■□□□ 1.89
CPSF4-203ENST00000430038 ABCC3O15438 1527 aa26.85■■□□□ 1.89
CPSF4-203ENST00000430038 EIF2AK4Q9P2K8 1649 aaKnown RBP26.84■■□□□ 1.89
CPSF4-203ENST00000430038 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
CPSF4-203ENST00000430038 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
CPSF4-203ENST00000430038 PKD2Q13563 968 aa26.82■■□□□ 1.88
CPSF4-203ENST00000430038 CEP152O94986 1710 aa26.82■■□□□ 1.88
CPSF4-203ENST00000430038 DUOX2Q9NRD8 1548 aa26.8■■□□□ 1.88
CPSF4-203ENST00000430038 RRP7BPQ9NSQ0 103 aa26.8■■□□□ 1.88
CPSF4-203ENST00000430038 DAPK1P53355 1430 aa26.8■■□□□ 1.88
CPSF4-203ENST00000430038 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
CPSF4-203ENST00000430038 ZC3H13Q5T200 1668 aaKnown RBP26.77■■□□□ 1.88
CPSF4-203ENST00000430038 SHANK2Q9UPX8 1470 aa26.77■■□□□ 1.88
CPSF4-203ENST00000430038 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
CPSF4-203ENST00000430038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.87
CPSF4-203ENST00000430038 CHIC2Q9UKJ5 165 aa26.75■■□□□ 1.87
CPSF4-203ENST00000430038 POLR1AO95602 1720 aaPredicted RBP26.75■■□□□ 1.87
CPSF4-203ENST00000430038 SPATA31D1Q6ZQQ2 1576 aa26.74■■□□□ 1.87
CPSF4-203ENST00000430038 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
CPSF4-203ENST00000430038 NLRP1Q9C000 1473 aa26.71■■□□□ 1.87
CPSF4-203ENST00000430038 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
CPSF4-203ENST00000430038 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
CPSF4-203ENST00000430038 PRDM15P57071 1507 aaPredicted RBP26.69■■□□□ 1.86
CPSF4-203ENST00000430038 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
CPSF4-203ENST00000430038 IQSEC2Q5JU85 1478 aa26.68■■□□□ 1.86
CPSF4-203ENST00000430038 THEMISQ8N1K5 641 aaPredicted RBP26.67■■□□□ 1.86
CPSF4-203ENST00000430038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.66■■□□□ 1.865e-6■□□□□ 8.1
CPSF4-203ENST00000430038 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
CPSF4-203ENST00000430038 UBR1Q8IWV7 1749 aa26.62■■□□□ 1.85
CPSF4-203ENST00000430038 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
CPSF4-203ENST00000430038 FAM50AQ14320 339 aaKnown RBP26.61■■□□□ 1.85
CPSF4-203ENST00000430038 ARHGAP31Q2M1Z3 1444 aa26.61■■□□□ 1.85
CPSF4-203ENST00000430038 MED14O60244 1454 aa26.61■■□□□ 1.85
CPSF4-203ENST00000430038 VWDEQ8N2E2 1590 aa26.59■■□□□ 1.85
CPSF4-203ENST00000430038 ADGRL2O95490 1459 aa26.58■■□□□ 1.85
CPSF4-203ENST00000430038 NPHP4O75161 1426 aaPredicted RBP26.57■■□□□ 1.84
CPSF4-203ENST00000430038 STRCP1A6NGW2 1772 aa26.56■■□□□ 1.84
CPSF4-203ENST00000430038 IQGAP1P46940 1657 aa26.55■■□□□ 1.84
CPSF4-203ENST00000430038 LMTK2Q8IWU2 1503 aa26.54■■□□□ 1.84
CPSF4-203ENST00000430038 UBAP1LF5GYI3 381 aa26.53■■□□□ 1.84
CPSF4-203ENST00000430038 LTKP29376 864 aa26.53■■□□□ 1.84
CPSF4-203ENST00000430038 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
CPSF4-203ENST00000430038 PIK3C2BO00750 1634 aa26.52■■□□□ 1.84
CPSF4-203ENST00000430038 ARHGAP23Q9P227 1491 aa26.49■■□□□ 1.83
CPSF4-203ENST00000430038 KANK1Q14678 1352 aa26.49■■□□□ 1.83
CPSF4-203ENST00000430038 SYNMO15061 1565 aa26.49■■□□□ 1.83
CPSF4-203ENST00000430038 CPS1P31327 1500 aa26.48■■□□□ 1.83
CPSF4-203ENST00000430038 IDI1Q13907 227 aa26.47■■□□□ 1.83
CPSF4-203ENST00000430038 SLIT1O75093 1534 aa26.47■■□□□ 1.83
CPSF4-203ENST00000430038 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
CPSF4-203ENST00000430038 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
CPSF4-203ENST00000430038 ALKQ9UM73 1620 aa26.44■■□□□ 1.82
CPSF4-203ENST00000430038 TXNDC2Q86VQ3 553 aa26.44■■□□□ 1.82
CPSF4-203ENST00000430038 NOS1P29475 1434 aa26.44■■□□□ 1.82
CPSF4-203ENST00000430038 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
CPSF4-203ENST00000430038 TMEM2Q9UHN6 1383 aa26.39■■□□□ 1.82
CPSF4-203ENST00000430038 LRRC7Q96NW7 1537 aa26.39■■□□□ 1.81
CPSF4-203ENST00000430038 ILDR2Q71H61 639 aa26.38■■□□□ 1.81
CPSF4-203ENST00000430038 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
CPSF4-203ENST00000430038 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
CPSF4-203ENST00000430038 PIP4K2BP78356 416 aa26.36■■□□□ 1.81
CPSF4-203ENST00000430038 MYO5BQ9ULV0 1848 aa26.36■■□□□ 1.81
CPSF4-203ENST00000430038 UNC13BO14795 1591 aa26.35■■□□□ 1.81
CPSF4-203ENST00000430038 XIRP1Q702N8 1843 aaKnown RBP26.35■■□□□ 1.81
CPSF4-203ENST00000430038 TET3O43151 1660 aa26.34■■□□□ 1.81
CPSF4-203ENST00000430038 ITGAEP38570 1179 aa26.34■■□□□ 1.81
CPSF4-203ENST00000430038 STAG3Q9UJ98 1225 aa26.33■■□□□ 1.81
CPSF4-203ENST00000430038 ROCK1Q13464 1354 aa26.33■■□□□ 1.8
CPSF4-203ENST00000430038 TOM1O60784 492 aa26.31■■□□□ 1.8
CPSF4-203ENST00000430038 HSPA1LP34931 641 aa26.31■■□□□ 1.8
CPSF4-203ENST00000430038 EID1Q9Y6B2 187 aa26.31■■□□□ 1.8
CPSF4-203ENST00000430038 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
CPSF4-203ENST00000430038 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
CPSF4-203ENST00000430038 E9PCH4 1651 aa26.3■■□□□ 1.8
CPSF4-203ENST00000430038 SCAF1Q9H7N4 1312 aaKnown RBP26.3■■□□□ 1.8
CPSF4-203ENST00000430038 RPRD2Q5VT52 1461 aaKnown RBP26.3■■□□□ 1.8
CPSF4-203ENST00000430038 SLC52A1Q9NWF4 448 aa26.27■■□□□ 1.8
CPSF4-203ENST00000430038 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
CPSF4-203ENST00000430038 SENP3Q9H4L4 574 aaPredicted RBP26.25■■□□□ 1.79
CPSF4-203ENST00000430038 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
CPSF4-203ENST00000430038 IQGAP3Q86VI3 1631 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms