RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 MYO3AQ8NEV4 1616 aa29.35■■■□□ 2.29
LIN28AP1-201ENST00000429574 NCOA1Q15788 1441 aa29.34■■■□□ 2.29
LIN28AP1-201ENST00000429574 FAM135AQ9P2D6 1515 aa29.34■■■□□ 2.29
LIN28AP1-201ENST00000429574 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
LIN28AP1-201ENST00000429574 CEP170BQ9Y4F5 1589 aaPredicted RBP29.3■■■□□ 2.28
LIN28AP1-201ENST00000429574 NCKAP5LQ9HCH0 1330 aa29.29■■■□□ 2.28
LIN28AP1-201ENST00000429574 ZNF142P52746 1687 aaPredicted RBP29.29■■■□□ 2.28
LIN28AP1-201ENST00000429574 PKD2Q13563 968 aa29.28■■■□□ 2.28
LIN28AP1-201ENST00000429574 FBXO31Q5XUX0 539 aaPredicted RBP29.28■■■□□ 2.28
LIN28AP1-201ENST00000429574 TNRQ92752 1358 aa29.27■■■□□ 2.28
LIN28AP1-201ENST00000429574 PZPP20742 1482 aa29.26■■■□□ 2.27
LIN28AP1-201ENST00000429574 EIF2AK4Q9P2K8 1649 aaKnown RBP29.24■■■□□ 2.27
LIN28AP1-201ENST00000429574 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
LIN28AP1-201ENST00000429574 DUOX2Q9NRD8 1548 aa29.24■■■□□ 2.27
LIN28AP1-201ENST00000429574 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
LIN28AP1-201ENST00000429574 FGD6Q6ZV73 1430 aa29.23■■■□□ 2.27
LIN28AP1-201ENST00000429574 PLA2R1Q13018 1463 aa29.22■■■□□ 2.27
LIN28AP1-201ENST00000429574 RNF17Q9BXT8 1623 aaKnown RBP29.21■■■□□ 2.27
LIN28AP1-201ENST00000429574 KIF15Q9NS87 1388 aa29.21■■■□□ 2.27
LIN28AP1-201ENST00000429574 ABCC5O15440 1437 aa29.2■■■□□ 2.27
LIN28AP1-201ENST00000429574 SHANK2Q9UPX8 1470 aa29.2■■■□□ 2.26
LIN28AP1-201ENST00000429574 CROCC2H7BZ55 1655 aa29.19■■■□□ 2.26
LIN28AP1-201ENST00000429574 ZC3H13Q5T200 1668 aaKnown RBP29.19■■■□□ 2.26
LIN28AP1-201ENST00000429574 DAPK1P53355 1430 aa29.19■■■□□ 2.26
LIN28AP1-201ENST00000429574 DNMT1P26358 1616 aaKnown RBP29.17■■■□□ 2.26
LIN28AP1-201ENST00000429574 FAM50AQ14320 339 aaKnown RBP29.17■■■□□ 2.26
LIN28AP1-201ENST00000429574 CHIC2Q9UKJ5 165 aa29.17■■■□□ 2.26
LIN28AP1-201ENST00000429574 THEMISQ8N1K5 641 aaPredicted RBP29.16■■■□□ 2.26
LIN28AP1-201ENST00000429574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
LIN28AP1-201ENST00000429574 TCOF1Q13428 1488 aaKnown RBP29.15■■■□□ 2.26
LIN28AP1-201ENST00000429574 ABCC3O15438 1527 aa29.15■■■□□ 2.26
LIN28AP1-201ENST00000429574 ANKRD30AQ9BXX3 1397 aa29.14■■■□□ 2.26
LIN28AP1-201ENST00000429574 NLRP1Q9C000 1473 aa29.13■■■□□ 2.25
LIN28AP1-201ENST00000429574 ERBINQ96RT1 1412 aa29.12■■■□□ 2.25
LIN28AP1-201ENST00000429574 KANK1Q14678 1352 aa29.12■■■□□ 2.25
LIN28AP1-201ENST00000429574 ANKLE2Q86XL3 938 aa29.11■■■□□ 2.25
LIN28AP1-201ENST00000429574 CFAP65Q6ZU64 1925 aaKnown RBP29.1■■■□□ 2.25
LIN28AP1-201ENST00000429574 CEP152O94986 1710 aa29.1■■■□□ 2.25
LIN28AP1-201ENST00000429574 UGGT1Q9NYU2 1555 aa29.08■■■□□ 2.25
LIN28AP1-201ENST00000429574 ZNF335Q9H4Z2 1342 aaPredicted RBP29.07■■■□□ 2.24
LIN28AP1-201ENST00000429574 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
LIN28AP1-201ENST00000429574 LTBP4Q8N2S1 1624 aa29.06■■■□□ 2.24
LIN28AP1-201ENST00000429574 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
LIN28AP1-201ENST00000429574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.05■■■□□ 2.24
LIN28AP1-201ENST00000429574 ERVK-7P63135 1459 aa29.03■■■□□ 2.24
LIN28AP1-201ENST00000429574 SPATA31D1Q6ZQQ2 1576 aa29.02■■■□□ 2.24
LIN28AP1-201ENST00000429574 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
LIN28AP1-201ENST00000429574 PRDM15P57071 1507 aaPredicted RBP29■■■□□ 2.23
LIN28AP1-201ENST00000429574 STAG3Q9UJ98 1225 aa28.96■■■□□ 2.23
LIN28AP1-201ENST00000429574 ARHGAP31Q2M1Z3 1444 aa28.94■■■□□ 2.22
LIN28AP1-201ENST00000429574 DEPDC5O75140 1603 aa28.94■■■□□ 2.22
LIN28AP1-201ENST00000429574 UBAP1LF5GYI3 381 aa28.93■■■□□ 2.22
LIN28AP1-201ENST00000429574 ADGRL2O95490 1459 aa28.92■■■□□ 2.22
LIN28AP1-201ENST00000429574 NPHP4O75161 1426 aaPredicted RBP28.92■■■□□ 2.22
LIN28AP1-201ENST00000429574 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
LIN28AP1-201ENST00000429574 PPARGC1BQ86YN6 1023 aaKnown RBP28.89■■■□□ 2.22
LIN28AP1-201ENST00000429574 ANKRD50Q9ULJ7 1429 aa28.88■■■□□ 2.21
LIN28AP1-201ENST00000429574 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
LIN28AP1-201ENST00000429574 UBR1Q8IWV7 1749 aa28.86■■■□□ 2.21
LIN28AP1-201ENST00000429574 MED14O60244 1454 aa28.85■■■□□ 2.21
LIN28AP1-201ENST00000429574 CPS1P31327 1500 aa28.85■■■□□ 2.21
LIN28AP1-201ENST00000429574 ITGAEP38570 1179 aa28.85■■■□□ 2.21
LIN28AP1-201ENST00000429574 IQGAP1P46940 1657 aa28.85■■■□□ 2.21
LIN28AP1-201ENST00000429574 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
LIN28AP1-201ENST00000429574 LMTK2Q8IWU2 1503 aa28.83■■■□□ 2.21
LIN28AP1-201ENST00000429574 SCAF1Q9H7N4 1312 aaKnown RBP28.8■■■□□ 2.2
LIN28AP1-201ENST00000429574 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
LIN28AP1-201ENST00000429574 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
LIN28AP1-201ENST00000429574 TOM1O60784 492 aa28.79■■■□□ 2.2
LIN28AP1-201ENST00000429574 VWDEQ8N2E2 1590 aa28.79■■■□□ 2.2
LIN28AP1-201ENST00000429574 PIK3C2BO00750 1634 aa28.78■■■□□ 2.2
LIN28AP1-201ENST00000429574 IDI1Q13907 227 aa28.77■■■□□ 2.2
LIN28AP1-201ENST00000429574 EFCAB6Q5THR3 1501 aa28.76■■■□□ 2.19
LIN28AP1-201ENST00000429574 SLC52A1Q9NWF4 448 aa28.75■■■□□ 2.19
LIN28AP1-201ENST00000429574 ROCK1Q13464 1354 aa28.75■■■□□ 2.19
LIN28AP1-201ENST00000429574 SLIT1O75093 1534 aa28.74■■■□□ 2.19
LIN28AP1-201ENST00000429574 LTKP29376 864 aa28.73■■■□□ 2.19
LIN28AP1-201ENST00000429574 PIP4K2BP78356 416 aa28.72■■■□□ 2.19
LIN28AP1-201ENST00000429574 TMEM2Q9UHN6 1383 aa28.72■■■□□ 2.19
LIN28AP1-201ENST00000429574 RPRD2Q5VT52 1461 aaKnown RBP28.71■■■□□ 2.19
LIN28AP1-201ENST00000429574 ARHGAP23Q9P227 1491 aa28.71■■■□□ 2.19
LIN28AP1-201ENST00000429574 BCANQ96GW7 911 aa28.7■■■□□ 2.18
LIN28AP1-201ENST00000429574 KDM5AP29375 1690 aaKnown RBP28.7■■■□□ 2.18
LIN28AP1-201ENST00000429574 TET3O43151 1660 aa28.69■■■□□ 2.18
LIN28AP1-201ENST00000429574 NOS1P29475 1434 aa28.69■■■□□ 2.18
LIN28AP1-201ENST00000429574 SYNMO15061 1565 aa28.67■■■□□ 2.18
LIN28AP1-201ENST00000429574 HDGFP51858 240 aaKnown RBP28.66■■■□□ 2.18
LIN28AP1-201ENST00000429574 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
LIN28AP1-201ENST00000429574 UNC13BO14795 1591 aa28.65■■■□□ 2.18
LIN28AP1-201ENST00000429574 CHGAP10645 457 aaKnown RBP28.64■■■□□ 2.18
LIN28AP1-201ENST00000429574 NUP155O75694 1391 aa28.62■■■□□ 2.17
LIN28AP1-201ENST00000429574 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
LIN28AP1-201ENST00000429574 ILDR2Q71H61 639 aa28.61■■■□□ 2.17
LIN28AP1-201ENST00000429574 PPP1R15AO75807 674 aaPredicted RBP28.6■■■□□ 2.17
LIN28AP1-201ENST00000429574 STRCP1A6NGW2 1772 aa28.59■■■□□ 2.17
LIN28AP1-201ENST00000429574 LRRC7Q96NW7 1537 aa28.58■■■□□ 2.17
LIN28AP1-201ENST00000429574 IQGAP3Q86VI3 1631 aa28.56■■■□□ 2.16
LIN28AP1-201ENST00000429574 SLC26A8Q96RN1 970 aa28.56■■■□□ 2.16
LIN28AP1-201ENST00000429574 E9PCH4 1651 aa28.54■■■□□ 2.16
LIN28AP1-201ENST00000429574 HSPA1LP34931 641 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms