RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
LIN28AP1-201ENST00000429574 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.24
LIN28AP1-201ENST00000429574 ABCC9O60706 1549 aa41.27■■■■■ 4.2
LIN28AP1-201ENST00000429574 RB1CC1Q8TDY2 1594 aa39.43■■■■□ 3.9
LIN28AP1-201ENST00000429574 DCAF8L2P0C7V8 631 aa39.31■■■■□ 3.88
LIN28AP1-201ENST00000429574 NACADO15069 1562 aa39.21■■■■□ 3.87
LIN28AP1-201ENST00000429574 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
LIN28AP1-201ENST00000429574 DNAJC5BQ9UF47 199 aa38.55■■■■□ 3.76
LIN28AP1-201ENST00000429574 PABPN1Q86U42 306 aaKnown RBP eCLIP38.5■■■■□ 3.75
LIN28AP1-201ENST00000429574 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
LIN28AP1-201ENST00000429574 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
LIN28AP1-201ENST00000429574 DCAF1Q9Y4B6 1507 aa38.29■■■■□ 3.72
LIN28AP1-201ENST00000429574 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
LIN28AP1-201ENST00000429574 SCRIBQ14160 1630 aa37.88■■■■□ 3.65
LIN28AP1-201ENST00000429574 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
LIN28AP1-201ENST00000429574 CC2D2AQ9P2K1 1620 aa37.26■■■■□ 3.56
LIN28AP1-201ENST00000429574 EIF4G1Q04637 1599 aaKnown RBP37.24■■■■□ 3.55
LIN28AP1-201ENST00000429574 CECR2Q9BXF3 1484 aa37.14■■■■□ 3.54
LIN28AP1-201ENST00000429574 NCAPD3P42695 1498 aa36.14■■■■□ 3.38
LIN28AP1-201ENST00000429574 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
LIN28AP1-201ENST00000429574 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
LIN28AP1-201ENST00000429574 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
LIN28AP1-201ENST00000429574 BAZ1AQ9NRL2 1556 aaPredicted RBP36.04■■■■□ 3.36
LIN28AP1-201ENST00000429574 HMGXB3Q12766 1538 aa35.9■■■■□ 3.34
LIN28AP1-201ENST00000429574 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
LIN28AP1-201ENST00000429574 MROH2BQ7Z745 1585 aa35.72■■■■□ 3.31
LIN28AP1-201ENST00000429574 ERCC6Q03468 1493 aa35.71■■■■□ 3.31
LIN28AP1-201ENST00000429574 PEG3Q9GZU2 1588 aa35.71■■■■□ 3.31
LIN28AP1-201ENST00000429574 NESP48681 1621 aa35.47■■■■□ 3.27
LIN28AP1-201ENST00000429574 CUX2O14529 1486 aa35.44■■■■□ 3.26
LIN28AP1-201ENST00000429574 DNAJC5Q9H3Z4 198 aa35.38■■■■□ 3.25
LIN28AP1-201ENST00000429574 WIZO95785 1651 aa35.35■■■■□ 3.25
LIN28AP1-201ENST00000429574 LAMC3Q9Y6N6 1575 aa35.34■■■■□ 3.25
LIN28AP1-201ENST00000429574 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
LIN28AP1-201ENST00000429574 CADPSQ9ULU8 1353 aa35.11■■■■□ 3.21
LIN28AP1-201ENST00000429574 RSF1Q96T23 1441 aaPredicted RBP35.09■■■■□ 3.21
LIN28AP1-201ENST00000429574 KIF21AQ7Z4S6 1674 aa35.06■■■■□ 3.2
LIN28AP1-201ENST00000429574 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
LIN28AP1-201ENST00000429574 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
LIN28AP1-201ENST00000429574 MRC2Q9UBG0 1479 aa34.79■■■■□ 3.16
LIN28AP1-201ENST00000429574 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
LIN28AP1-201ENST00000429574 CFTRP13569 1480 aa34.71■■■■□ 3.15
LIN28AP1-201ENST00000429574 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
LIN28AP1-201ENST00000429574 WDR62O43379 1518 aa34.65■■■■□ 3.14
LIN28AP1-201ENST00000429574 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
LIN28AP1-201ENST00000429574 PRDM2Q13029 1718 aa34.47■■■■□ 3.11
LIN28AP1-201ENST00000429574 URB2Q14146 1524 aaKnown RBP34.34■■■■□ 3.09
LIN28AP1-201ENST00000429574 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
LIN28AP1-201ENST00000429574 TOPBP1Q92547 1522 aa34.06■■■■□ 3.04
LIN28AP1-201ENST00000429574 IFT140Q96RY7 1462 aa34.03■■■■□ 3.04
LIN28AP1-201ENST00000429574 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
LIN28AP1-201ENST00000429574 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
LIN28AP1-201ENST00000429574 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
LIN28AP1-201ENST00000429574 TRIM41Q8WV44 630 aa33.93■■■■□ 3.02
LIN28AP1-201ENST00000429574 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
LIN28AP1-201ENST00000429574 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
LIN28AP1-201ENST00000429574 POLA1P09884 1462 aaPredicted RBP33.71■■■□□ 2.99
LIN28AP1-201ENST00000429574 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
LIN28AP1-201ENST00000429574 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.98
LIN28AP1-201ENST00000429574 SOGA1O94964 1423 aa33.66■■■□□ 2.98
LIN28AP1-201ENST00000429574 RAD54L2Q9Y4B4 1467 aa33.61■■■□□ 2.97
LIN28AP1-201ENST00000429574 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
LIN28AP1-201ENST00000429574 FBLN2P98095 1184 aa33.57■■■□□ 2.96
LIN28AP1-201ENST00000429574 CUX1P39880 1505 aa33.54■■■□□ 2.96
LIN28AP1-201ENST00000429574 TDRD9Q8NDG6 1382 aaKnown RBP33.53■■■□□ 2.96
LIN28AP1-201ENST00000429574 CHD1O14646 1710 aa33.46■■■□□ 2.95
LIN28AP1-201ENST00000429574 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
LIN28AP1-201ENST00000429574 RIMBP3CA6NJZ7 1639 aa33.39■■■□□ 2.94
LIN28AP1-201ENST00000429574 RIMBP3BA6NNM3 1639 aa33.39■■■□□ 2.94
LIN28AP1-201ENST00000429574 RIMBP3Q9UFD9 1639 aa33.39■■■□□ 2.94
LIN28AP1-201ENST00000429574 CHMP7Q8WUX9 453 aaPredicted RBP33.34■■■□□ 2.93
LIN28AP1-201ENST00000429574 SNAPC4Q5SXM2 1469 aa33.33■■■□□ 2.93
LIN28AP1-201ENST00000429574 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
LIN28AP1-201ENST00000429574 ARHGEF11O15085 1522 aa33.3■■■□□ 2.92
LIN28AP1-201ENST00000429574 MAGI1Q96QZ7 1491 aaPredicted RBP33.27■■■□□ 2.92
LIN28AP1-201ENST00000429574 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
LIN28AP1-201ENST00000429574 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
LIN28AP1-201ENST00000429574 PBRM1Q86U86 1689 aa33.2■■■□□ 2.9
LIN28AP1-201ENST00000429574 ABCA10Q8WWZ4 1543 aa33.19■■■□□ 2.9
LIN28AP1-201ENST00000429574 CYB5RLQ6IPT4 315 aa33.17■■■□□ 2.9
LIN28AP1-201ENST00000429574 SYNJ2O15056 1496 aa33.15■■■□□ 2.9
LIN28AP1-201ENST00000429574 SYNJ1O43426 1573 aa33.15■■■□□ 2.9
LIN28AP1-201ENST00000429574 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
LIN28AP1-201ENST00000429574 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
LIN28AP1-201ENST00000429574 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
LIN28AP1-201ENST00000429574 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
LIN28AP1-201ENST00000429574 ARAP1Q96P48 1450 aa32.96■■■□□ 2.87
LIN28AP1-201ENST00000429574 GRIN2AQ12879 1464 aa32.85■■■□□ 2.85
LIN28AP1-201ENST00000429574 ADAMTS12P58397 1594 aa32.84■■■□□ 2.85
LIN28AP1-201ENST00000429574 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
LIN28AP1-201ENST00000429574 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.84
LIN28AP1-201ENST00000429574 TRHP20396 242 aaPredicted RBP32.81■■■□□ 2.84
LIN28AP1-201ENST00000429574 NUP160Q12769 1436 aa32.68■■■□□ 2.82
LIN28AP1-201ENST00000429574 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
LIN28AP1-201ENST00000429574 KIF27Q86VH2 1401 aa32.59■■■□□ 2.81
LIN28AP1-201ENST00000429574 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
LIN28AP1-201ENST00000429574 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
LIN28AP1-201ENST00000429574 JPH4Q96JJ6 628 aa32.48■■■□□ 2.79
LIN28AP1-201ENST00000429574 IGF1RP08069 1367 aa32.45■■■□□ 2.78
LIN28AP1-201ENST00000429574 CUL7Q14999 1698 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms