RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 UGGT2Q9NYU1 1516 aa11.39□□□□□ -0.59
HOXD8-202ENST00000429017 COL17A1Q9UMD9 1497 aaPredicted RBP11.39□□□□□ -0.59
HOXD8-202ENST00000429017 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
HOXD8-202ENST00000429017 KDM5BQ9UGL1 1544 aa11.38□□□□□ -0.59
HOXD8-202ENST00000429017 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
HOXD8-202ENST00000429017 EPRSP07814 1512 aaKnown RBP11.37□□□□□ -0.59
HOXD8-202ENST00000429017 KIAA0556O60303 1618 aa11.37□□□□□ -0.59
HOXD8-202ENST00000429017 ZCCHC11Q5TAX3 1644 aaKnown RBP11.36□□□□□ -0.59
HOXD8-202ENST00000429017 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
HOXD8-202ENST00000429017 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
HOXD8-202ENST00000429017 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
HOXD8-202ENST00000429017 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
HOXD8-202ENST00000429017 G3V3G9 751 aa11.33□□□□□ -0.6
HOXD8-202ENST00000429017 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
HOXD8-202ENST00000429017 ERBB3P21860 1342 aa11.33□□□□□ -0.6
HOXD8-202ENST00000429017 ADGRL1O94910 1474 aa11.31□□□□□ -0.6
HOXD8-202ENST00000429017 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
HOXD8-202ENST00000429017 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
HOXD8-202ENST00000429017 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
HOXD8-202ENST00000429017 WDR7Q9Y4E6 1490 aa11.29□□□□□ -0.6
HOXD8-202ENST00000429017 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
HOXD8-202ENST00000429017 ABCA8O94911 1581 aa11.29□□□□□ -0.6
HOXD8-202ENST00000429017 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
HOXD8-202ENST00000429017 TEX14Q8IWB6 1497 aa11.28□□□□□ -0.6
HOXD8-202ENST00000429017 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.6
HOXD8-202ENST00000429017 PRXQ9BXM0 1461 aa11.27□□□□□ -0.6
HOXD8-202ENST00000429017 GPR153Q6NV75 609 aa11.27□□□□□ -0.61
HOXD8-202ENST00000429017 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
HOXD8-202ENST00000429017 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
HOXD8-202ENST00000429017 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
HOXD8-202ENST00000429017 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
HOXD8-202ENST00000429017 CD109Q6YHK3 1445 aa11.24□□□□□ -0.61
HOXD8-202ENST00000429017 MAGI3Q5TCQ9 1506 aa11.24□□□□□ -0.61
HOXD8-202ENST00000429017 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
HOXD8-202ENST00000429017 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
HOXD8-202ENST00000429017 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
HOXD8-202ENST00000429017 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
HOXD8-202ENST00000429017 ARID3CA6NKF2 412 aa11.2□□□□□ -0.62
HOXD8-202ENST00000429017 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
HOXD8-202ENST00000429017 ATP10BO94823 1461 aa11.2□□□□□ -0.62
HOXD8-202ENST00000429017 HECW2Q9P2P5 1572 aa11.19□□□□□ -0.62
HOXD8-202ENST00000429017 KIF21BO75037 1637 aa11.16□□□□□ -0.62
HOXD8-202ENST00000429017 SOX12O15370 315 aa11.16□□□□□ -0.62
HOXD8-202ENST00000429017 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
HOXD8-202ENST00000429017 SAMD9Q5K651 1589 aa11.15□□□□□ -0.62
HOXD8-202ENST00000429017 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
HOXD8-202ENST00000429017 PTGER2P43116 358 aa11.15□□□□□ -0.62
HOXD8-202ENST00000429017 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
HOXD8-202ENST00000429017 RAPGEF6Q8TEU7 1601 aa11.12□□□□□ -0.63
HOXD8-202ENST00000429017 RAPGEF3O95398 923 aa11.11□□□□□ -0.63
HOXD8-202ENST00000429017 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
HOXD8-202ENST00000429017 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
HOXD8-202ENST00000429017 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
HOXD8-202ENST00000429017 FRMPD1Q5SYB0 1578 aa11.1□□□□□ -0.63
HOXD8-202ENST00000429017 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
HOXD8-202ENST00000429017 ADAMTSL3P82987 1691 aa11.08□□□□□ -0.64
HOXD8-202ENST00000429017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
HOXD8-202ENST00000429017 RANGAP1P46060 587 aaPredicted RBP11.08□□□□□ -0.64
HOXD8-202ENST00000429017 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
HOXD8-202ENST00000429017 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
HOXD8-202ENST00000429017 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
HOXD8-202ENST00000429017 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
HOXD8-202ENST00000429017 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
HOXD8-202ENST00000429017 NEO1Q92859 1461 aa11.07□□□□□ -0.64
HOXD8-202ENST00000429017 FAM9AQ8IZU1 332 aaPredicted RBP11.06□□□□□ -0.64
HOXD8-202ENST00000429017 PTPRMP28827 1452 aa11.06□□□□□ -0.64
HOXD8-202ENST00000429017 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
HOXD8-202ENST00000429017 FBXO22Q8NEZ5 403 aa11.05□□□□□ -0.64
HOXD8-202ENST00000429017 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
HOXD8-202ENST00000429017 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
HOXD8-202ENST00000429017 EEA1Q15075 1411 aa11.03□□□□□ -0.64
HOXD8-202ENST00000429017 KIF3CO14782 793 aa11.02□□□□□ -0.64
HOXD8-202ENST00000429017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.02□□□□□ -0.65
HOXD8-202ENST00000429017 MADDQ8WXG6 1647 aa11.02□□□□□ -0.65
HOXD8-202ENST00000429017 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
HOXD8-202ENST00000429017 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
HOXD8-202ENST00000429017 RICTORQ6R327 1708 aa11.01□□□□□ -0.65
HOXD8-202ENST00000429017 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
HOXD8-202ENST00000429017 TTC37Q6PGP7 1564 aa11.01□□□□□ -0.65
HOXD8-202ENST00000429017 SIGLEC1Q9BZZ2 1709 aa11□□□□□ -0.65
HOXD8-202ENST00000429017 ARHGEF40Q8TER5 1519 aa11□□□□□ -0.65
HOXD8-202ENST00000429017 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
HOXD8-202ENST00000429017 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
HOXD8-202ENST00000429017 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
HOXD8-202ENST00000429017 FANCAO15360 1455 aa10.99□□□□□ -0.65
HOXD8-202ENST00000429017 ARID4BQ4LE39 1312 aaPredicted RBP10.99□□□□□ -0.65
HOXD8-202ENST00000429017 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
HOXD8-202ENST00000429017 LMTK3Q96Q04 1460 aa10.97□□□□□ -0.65
HOXD8-202ENST00000429017 YEATS2Q9ULM3 1422 aa10.97□□□□□ -0.65
HOXD8-202ENST00000429017 RIMS1Q86UR5 1692 aaKnown RBP10.97□□□□□ -0.65
HOXD8-202ENST00000429017 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.65
HOXD8-202ENST00000429017 ZMYM4Q5VZL5 1548 aa10.96□□□□□ -0.65
HOXD8-202ENST00000429017 CFAP74Q9C0B2 1584 aa10.96□□□□□ -0.66
HOXD8-202ENST00000429017 PBX2P40425 430 aa10.95□□□□□ -0.66
HOXD8-202ENST00000429017 NLRP6P59044 892 aa10.95□□□□□ -0.66
HOXD8-202ENST00000429017 ZFYVE16Q7Z3T8 1539 aa10.94□□□□□ -0.66
HOXD8-202ENST00000429017 HECW1Q76N89 1606 aa10.94□□□□□ -0.66
HOXD8-202ENST00000429017 FBXO41Q8TF61 875 aa10.94□□□□□ -0.66
HOXD8-202ENST00000429017 PLCH2O75038 1416 aa10.93□□□□□ -0.66
HOXD8-202ENST00000429017 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms