RNA–Protein interactions for RNA: ENST00000425841.1

CLHC1-206, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-206ENST00000425841 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
CLHC1-206ENST00000425841 MED1Q15648 1581 aaPredicted RBP13.96□□□□□ -0.18
CLHC1-206ENST00000425841 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.18
CLHC1-206ENST00000425841 PZPP20742 1482 aa13.95□□□□□ -0.18
CLHC1-206ENST00000425841 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
CLHC1-206ENST00000425841 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
CLHC1-206ENST00000425841 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
CLHC1-206ENST00000425841 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
CLHC1-206ENST00000425841 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
CLHC1-206ENST00000425841 DEPDC5O75140 1603 aa13.92□□□□□ -0.18
CLHC1-206ENST00000425841 TNRQ92752 1358 aa13.92□□□□□ -0.18
CLHC1-206ENST00000425841 CCDC141Q6ZP82 1450 aa13.92□□□□□ -0.18
CLHC1-206ENST00000425841 SHANK2Q9UPX8 1470 aa13.92□□□□□ -0.18
CLHC1-206ENST00000425841 MED14O60244 1454 aa13.9□□□□□ -0.18
CLHC1-206ENST00000425841 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
CLHC1-206ENST00000425841 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
CLHC1-206ENST00000425841 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
CLHC1-206ENST00000425841 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
CLHC1-206ENST00000425841 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
CLHC1-206ENST00000425841 HSPA1LP34931 641 aa13.88□□□□□ -0.19
CLHC1-206ENST00000425841 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
CLHC1-206ENST00000425841 RNF17Q9BXT8 1623 aaKnown RBP13.88□□□□□ -0.19
CLHC1-206ENST00000425841 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
CLHC1-206ENST00000425841 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
CLHC1-206ENST00000425841 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
CLHC1-206ENST00000425841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLHC1-206ENST00000425841 KIF3BO15066 747 aa13.86□□□□□ -0.19
CLHC1-206ENST00000425841 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
CLHC1-206ENST00000425841 SYNMO15061 1565 aa13.86□□□□□ -0.19
CLHC1-206ENST00000425841 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
CLHC1-206ENST00000425841 TOM1O60784 492 aa13.85□□□□□ -0.19
CLHC1-206ENST00000425841 ABCC3O15438 1527 aa13.84□□□□□ -0.19
CLHC1-206ENST00000425841 MROH1Q8NDA8 1641 aa13.83□□□□□ -0.2
CLHC1-206ENST00000425841 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
CLHC1-206ENST00000425841 PIP4K2BP78356 416 aa13.83□□□□□ -0.2
CLHC1-206ENST00000425841 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.2
CLHC1-206ENST00000425841 MAST1Q9Y2H9 1570 aa13.83□□□□□ -0.2
CLHC1-206ENST00000425841 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
CLHC1-206ENST00000425841 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CLHC1-206ENST00000425841 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
CLHC1-206ENST00000425841 UBR1Q8IWV7 1749 aa13.81□□□□□ -0.2
CLHC1-206ENST00000425841 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
CLHC1-206ENST00000425841 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
CLHC1-206ENST00000425841 CEP152O94986 1710 aa13.8□□□□□ -0.2
CLHC1-206ENST00000425841 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
CLHC1-206ENST00000425841 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
CLHC1-206ENST00000425841 SLIT1O75093 1534 aa13.74□□□□□ -0.21
CLHC1-206ENST00000425841 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
CLHC1-206ENST00000425841 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
CLHC1-206ENST00000425841 VPS8Q8N3P4 1428 aa13.74□□□□□ -0.21
CLHC1-206ENST00000425841 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
CLHC1-206ENST00000425841 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
CLHC1-206ENST00000425841 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
CLHC1-206ENST00000425841 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
CLHC1-206ENST00000425841 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
CLHC1-206ENST00000425841 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
CLHC1-206ENST00000425841 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
CLHC1-206ENST00000425841 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
CLHC1-206ENST00000425841 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
CLHC1-206ENST00000425841 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
CLHC1-206ENST00000425841 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
CLHC1-206ENST00000425841 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
CLHC1-206ENST00000425841 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
CLHC1-206ENST00000425841 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
CLHC1-206ENST00000425841 LTKP29376 864 aa13.66□□□□□ -0.22
CLHC1-206ENST00000425841 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
CLHC1-206ENST00000425841 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
CLHC1-206ENST00000425841 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
CLHC1-206ENST00000425841 ROBO1Q9Y6N7 1651 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 TMEM2Q9UHN6 1383 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 TET3O43151 1660 aa13.63□□□□□ -0.23
CLHC1-206ENST00000425841 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
CLHC1-206ENST00000425841 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
CLHC1-206ENST00000425841 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
CLHC1-206ENST00000425841 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
CLHC1-206ENST00000425841 ABCC5O15440 1437 aa13.61□□□□□ -0.23
CLHC1-206ENST00000425841 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
CLHC1-206ENST00000425841 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
CLHC1-206ENST00000425841 NKTRP30414 1462 aaKnown RBP13.59□□□□□ -0.23
CLHC1-206ENST00000425841 DAPK1P53355 1430 aa13.58□□□□□ -0.24
CLHC1-206ENST00000425841 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
CLHC1-206ENST00000425841 NOS1P29475 1434 aa13.56□□□□□ -0.24
CLHC1-206ENST00000425841 KCNA6P17658 529 aa13.55□□□□□ -0.24
CLHC1-206ENST00000425841 APLP2Q06481 763 aa13.55□□□□□ -0.24
CLHC1-206ENST00000425841 SETD1AO15047 1707 aaKnown RBP13.55□□□□□ -0.24
CLHC1-206ENST00000425841 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 IDI1Q13907 227 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 POTEAQ6S8J7 498 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 MYO5BQ9ULV0 1848 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 KANK1Q14678 1352 aa13.54□□□□□ -0.24
CLHC1-206ENST00000425841 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
CLHC1-206ENST00000425841 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
CLHC1-206ENST00000425841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLHC1-206ENST00000425841 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
CLHC1-206ENST00000425841 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
CLHC1-206ENST00000425841 ADGRL2O95490 1459 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms