RNA–Protein interactions for RNA: ENST00000425841.1

CLHC1-206, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-206ENST00000425841 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.12
CLHC1-206ENST00000425841 ABCC9O60706 1549 aa20.05■□□□□ 0.8
CLHC1-206ENST00000425841 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CLHC1-206ENST00000425841 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
CLHC1-206ENST00000425841 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
CLHC1-206ENST00000425841 NACADO15069 1562 aa18.85■□□□□ 0.61
CLHC1-206ENST00000425841 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
CLHC1-206ENST00000425841 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLHC1-206ENST00000425841 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
CLHC1-206ENST00000425841 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
CLHC1-206ENST00000425841 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
CLHC1-206ENST00000425841 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
CLHC1-206ENST00000425841 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
CLHC1-206ENST00000425841 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
CLHC1-206ENST00000425841 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
CLHC1-206ENST00000425841 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
CLHC1-206ENST00000425841 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
CLHC1-206ENST00000425841 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
CLHC1-206ENST00000425841 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
CLHC1-206ENST00000425841 CUX2O14529 1486 aa17.42■□□□□ 0.38
CLHC1-206ENST00000425841 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
CLHC1-206ENST00000425841 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
CLHC1-206ENST00000425841 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
CLHC1-206ENST00000425841 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
CLHC1-206ENST00000425841 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
CLHC1-206ENST00000425841 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
CLHC1-206ENST00000425841 NESP48681 1621 aa17.18■□□□□ 0.34
CLHC1-206ENST00000425841 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
CLHC1-206ENST00000425841 PEG3Q9GZU2 1588 aa17.13■□□□□ 0.33
CLHC1-206ENST00000425841 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
CLHC1-206ENST00000425841 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
CLHC1-206ENST00000425841 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
CLHC1-206ENST00000425841 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
CLHC1-206ENST00000425841 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
CLHC1-206ENST00000425841 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
CLHC1-206ENST00000425841 WDR62O43379 1518 aa16.82■□□□□ 0.28
CLHC1-206ENST00000425841 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
CLHC1-206ENST00000425841 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
CLHC1-206ENST00000425841 WIZO95785 1651 aa16.76■□□□□ 0.27
CLHC1-206ENST00000425841 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
CLHC1-206ENST00000425841 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
CLHC1-206ENST00000425841 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
CLHC1-206ENST00000425841 CFTRP13569 1480 aa16.61■□□□□ 0.25
CLHC1-206ENST00000425841 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
CLHC1-206ENST00000425841 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
CLHC1-206ENST00000425841 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
CLHC1-206ENST00000425841 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
CLHC1-206ENST00000425841 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
CLHC1-206ENST00000425841 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
CLHC1-206ENST00000425841 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
CLHC1-206ENST00000425841 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
CLHC1-206ENST00000425841 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
CLHC1-206ENST00000425841 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
CLHC1-206ENST00000425841 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
CLHC1-206ENST00000425841 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CLHC1-206ENST00000425841 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
CLHC1-206ENST00000425841 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
CLHC1-206ENST00000425841 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
CLHC1-206ENST00000425841 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
CLHC1-206ENST00000425841 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
CLHC1-206ENST00000425841 CHD1O14646 1710 aa16.23■□□□□ 0.19
CLHC1-206ENST00000425841 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
CLHC1-206ENST00000425841 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
CLHC1-206ENST00000425841 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
CLHC1-206ENST00000425841 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
CLHC1-206ENST00000425841 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
CLHC1-206ENST00000425841 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
CLHC1-206ENST00000425841 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
CLHC1-206ENST00000425841 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
CLHC1-206ENST00000425841 FBLN2P98095 1184 aa16■□□□□ 0.15
CLHC1-206ENST00000425841 SOGA1O94964 1423 aa16■□□□□ 0.15
CLHC1-206ENST00000425841 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
CLHC1-206ENST00000425841 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
CLHC1-206ENST00000425841 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
CLHC1-206ENST00000425841 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
CLHC1-206ENST00000425841 CUX1P39880 1505 aa15.96■□□□□ 0.15
CLHC1-206ENST00000425841 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
CLHC1-206ENST00000425841 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
CLHC1-206ENST00000425841 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
CLHC1-206ENST00000425841 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
CLHC1-206ENST00000425841 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
CLHC1-206ENST00000425841 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
CLHC1-206ENST00000425841 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
CLHC1-206ENST00000425841 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
CLHC1-206ENST00000425841 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
CLHC1-206ENST00000425841 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
CLHC1-206ENST00000425841 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
CLHC1-206ENST00000425841 CEP170Q5SW79 1584 aa15.72■□□□□ 0.11
CLHC1-206ENST00000425841 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
CLHC1-206ENST00000425841 NUP160Q12769 1436 aa15.71■□□□□ 0.11
CLHC1-206ENST00000425841 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
CLHC1-206ENST00000425841 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
CLHC1-206ENST00000425841 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
CLHC1-206ENST00000425841 WRNQ14191 1432 aaPredicted RBP eCLIP15.65■□□□□ 0.1
CLHC1-206ENST00000425841 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
CLHC1-206ENST00000425841 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
CLHC1-206ENST00000425841 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
CLHC1-206ENST00000425841 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
CLHC1-206ENST00000425841 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CLHC1-206ENST00000425841 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms