RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.98
TFRC-204ENST00000421258 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.98
TFRC-204ENST00000421258 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
TFRC-204ENST00000421258 TOM1O60784 492 aa21.13■□□□□ 0.97
TFRC-204ENST00000421258 TNRQ92752 1358 aa21.12■□□□□ 0.97
TFRC-204ENST00000421258 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
TFRC-204ENST00000421258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.1■□□□□ 0.97
TFRC-204ENST00000421258 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
TFRC-204ENST00000421258 MBD5Q9P267 1494 aa21.08■□□□□ 0.97
TFRC-204ENST00000421258 PZPP20742 1482 aa21.07■□□□□ 0.96
TFRC-204ENST00000421258 KDM5DQ9BY66 1539 aa21.05■□□□□ 0.96
TFRC-204ENST00000421258 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
TFRC-204ENST00000421258 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
TFRC-204ENST00000421258 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
TFRC-204ENST00000421258 DHX29Q7Z478 1369 aaKnown RBP21.04■□□□□ 0.96
TFRC-204ENST00000421258 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
TFRC-204ENST00000421258 KIF3BO15066 747 aa21.03■□□□□ 0.96
TFRC-204ENST00000421258 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
TFRC-204ENST00000421258 UGGT1Q9NYU2 1555 aa21.01■□□□□ 0.95
TFRC-204ENST00000421258 IQGAP1P46940 1657 aa21■□□□□ 0.95
TFRC-204ENST00000421258 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
TFRC-204ENST00000421258 MED14O60244 1454 aa21■□□□□ 0.95
TFRC-204ENST00000421258 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
TFRC-204ENST00000421258 MIA2Q96PC5 1412 aa20.99■□□□□ 0.95
TFRC-204ENST00000421258 DEPDC5O75140 1603 aa20.99■□□□□ 0.95
TFRC-204ENST00000421258 NLRP1Q9C000 1473 aa20.97■□□□□ 0.95
TFRC-204ENST00000421258 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
TFRC-204ENST00000421258 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
TFRC-204ENST00000421258 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
TFRC-204ENST00000421258 RGS17Q9UGC6 210 aaPredicted RBP20.96■□□□□ 0.95
TFRC-204ENST00000421258 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
TFRC-204ENST00000421258 CCDC141Q6ZP82 1450 aa20.94■□□□□ 0.94
TFRC-204ENST00000421258 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
TFRC-204ENST00000421258 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
TFRC-204ENST00000421258 SYNMO15061 1565 aa20.93■□□□□ 0.94
TFRC-204ENST00000421258 ZC3H13Q5T200 1668 aaKnown RBP20.9■□□□□ 0.94
TFRC-204ENST00000421258 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
TFRC-204ENST00000421258 ABCC3O15438 1527 aa20.88■□□□□ 0.93
TFRC-204ENST00000421258 ERVK-7P63135 1459 aa20.86■□□□□ 0.93
TFRC-204ENST00000421258 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
TFRC-204ENST00000421258 XIRP1Q702N8 1843 aaKnown RBP20.84■□□□□ 0.93
TFRC-204ENST00000421258 UBR1Q8IWV7 1749 aa20.83■□□□□ 0.92
TFRC-204ENST00000421258 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
TFRC-204ENST00000421258 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
TFRC-204ENST00000421258 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
TFRC-204ENST00000421258 CEP152O94986 1710 aa20.8■□□□□ 0.92
TFRC-204ENST00000421258 ARHGEF5Q12774 1597 aa20.8■□□□□ 0.92
TFRC-204ENST00000421258 LTKP29376 864 aa20.79■□□□□ 0.92
TFRC-204ENST00000421258 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
TFRC-204ENST00000421258 SETD1AO15047 1707 aaKnown RBP20.77■□□□□ 0.92
TFRC-204ENST00000421258 ARHGAP23Q9P227 1491 aa20.75■□□□□ 0.91
TFRC-204ENST00000421258 SLIT1O75093 1534 aa20.73■□□□□ 0.91
TFRC-204ENST00000421258 EIF2AK4Q9P2K8 1649 aaKnown RBP20.72■□□□□ 0.91
TFRC-204ENST00000421258 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
TFRC-204ENST00000421258 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
TFRC-204ENST00000421258 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
TFRC-204ENST00000421258 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
TFRC-204ENST00000421258 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
TFRC-204ENST00000421258 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
TFRC-204ENST00000421258 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.9
TFRC-204ENST00000421258 TMEM94Q12767 1356 aa20.7■□□□□ 0.9
TFRC-204ENST00000421258 FAM135BQ49AJ0 1406 aa20.7■□□□□ 0.9
TFRC-204ENST00000421258 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
TFRC-204ENST00000421258 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
TFRC-204ENST00000421258 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
TFRC-204ENST00000421258 TMEM2Q9UHN6 1383 aa20.63■□□□□ 0.89
TFRC-204ENST00000421258 SLC26A8Q96RN1 970 aa20.61■□□□□ 0.89
TFRC-204ENST00000421258 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
TFRC-204ENST00000421258 DUOX2Q9NRD8 1548 aa20.61■□□□□ 0.89
TFRC-204ENST00000421258 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
TFRC-204ENST00000421258 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
TFRC-204ENST00000421258 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
TFRC-204ENST00000421258 TET3O43151 1660 aa20.58■□□□□ 0.88
TFRC-204ENST00000421258 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
TFRC-204ENST00000421258 PROSER2Q86WR7 435 aaPredicted RBP20.57■□□□□ 0.88
TFRC-204ENST00000421258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.882e-19■□□□□ 10.7
TFRC-204ENST00000421258 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
TFRC-204ENST00000421258 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
TFRC-204ENST00000421258 KCNA6P17658 529 aa20.56■□□□□ 0.88
TFRC-204ENST00000421258 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
TFRC-204ENST00000421258 LRP6O75581 1613 aa20.54■□□□□ 0.88
TFRC-204ENST00000421258 KANK4Q5T7N3 995 aaPredicted RBP20.54■□□□□ 0.88
TFRC-204ENST00000421258 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
TFRC-204ENST00000421258 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
TFRC-204ENST00000421258 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
TFRC-204ENST00000421258 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
TFRC-204ENST00000421258 IDI1Q13907 227 aa20.52■□□□□ 0.88
TFRC-204ENST00000421258 ERBINQ96RT1 1412 aa20.52■□□□□ 0.87
TFRC-204ENST00000421258 CROCC2H7BZ55 1655 aa20.51■□□□□ 0.87
TFRC-204ENST00000421258 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
TFRC-204ENST00000421258 JCADQ9P266 1359 aa20.5■□□□□ 0.87
TFRC-204ENST00000421258 MSH6P52701 1360 aa20.49■□□□□ 0.87
TFRC-204ENST00000421258 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
TFRC-204ENST00000421258 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
TFRC-204ENST00000421258 ABCC5O15440 1437 aa20.49■□□□□ 0.87
TFRC-204ENST00000421258 SLAIN2Q9P270 581 aa20.48■□□□□ 0.87
TFRC-204ENST00000421258 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
TFRC-204ENST00000421258 UPF1Q92900 1129 aaKnown RBP eCLIP20.46■□□□□ 0.87
TFRC-204ENST00000421258 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
TFRC-204ENST00000421258 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms