RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MIA2Q96PC5 1412 aa27.46■■□□□ 1.99
MSH6-203ENST00000420813 PLA2R1Q13018 1463 aa27.45■■□□□ 1.99
MSH6-203ENST00000420813 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
MSH6-203ENST00000420813 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.98
MSH6-203ENST00000420813 LTBP4Q8N2S1 1624 aa27.41■■□□□ 1.98
MSH6-203ENST00000420813 PZPP20742 1482 aa27.4■■□□□ 1.98
MSH6-203ENST00000420813 RNF17Q9BXT8 1623 aaKnown RBP27.4■■□□□ 1.98
MSH6-203ENST00000420813 A2ML1A8K2U0 1454 aa27.39■■□□□ 1.98
MSH6-203ENST00000420813 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
MSH6-203ENST00000420813 EIF2AK4Q9P2K8 1649 aaKnown RBP27.39■■□□□ 1.98
MSH6-203ENST00000420813 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
MSH6-203ENST00000420813 PKD2Q13563 968 aa27.37■■□□□ 1.97
MSH6-203ENST00000420813 IQSEC2Q5JU85 1478 aa27.36■■□□□ 1.97
MSH6-203ENST00000420813 ZC3H13Q5T200 1668 aaKnown RBP27.36■■□□□ 1.97
MSH6-203ENST00000420813 WASHC2CQ9Y4E1 1318 aa27.36■■□□□ 1.97
MSH6-203ENST00000420813 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
MSH6-203ENST00000420813 TNRQ92752 1358 aa27.34■■□□□ 1.97
MSH6-203ENST00000420813 CROCC2H7BZ55 1655 aa27.32■■□□□ 1.96
MSH6-203ENST00000420813 POLR1AO95602 1720 aaPredicted RBP27.31■■□□□ 1.96
MSH6-203ENST00000420813 APLP2Q06481 763 aa27.3■■□□□ 1.96
MSH6-203ENST00000420813 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
MSH6-203ENST00000420813 FBXO31Q5XUX0 539 aaPredicted RBP27.29■■□□□ 1.96
MSH6-203ENST00000420813 ABCC3O15438 1527 aa27.28■■□□□ 1.96
MSH6-203ENST00000420813 DUOX2Q9NRD8 1548 aa27.28■■□□□ 1.96
MSH6-203ENST00000420813 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
MSH6-203ENST00000420813 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
MSH6-203ENST00000420813 NLRP1Q9C000 1473 aa27.26■■□□□ 1.95
MSH6-203ENST00000420813 CEP152O94986 1710 aa27.23■■□□□ 1.95
MSH6-203ENST00000420813 ZNF335Q9H4Z2 1342 aaPredicted RBP27.22■■□□□ 1.95
MSH6-203ENST00000420813 ABCC5O15440 1437 aa27.22■■□□□ 1.95
MSH6-203ENST00000420813 SPATA31D1Q6ZQQ2 1576 aa27.22■■□□□ 1.95
MSH6-203ENST00000420813 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
MSH6-203ENST00000420813 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.94
MSH6-203ENST00000420813 UGGT1Q9NYU2 1555 aa27.2■■□□□ 1.94
MSH6-203ENST00000420813 KIF15Q9NS87 1388 aa27.19■■□□□ 1.94
MSH6-203ENST00000420813 ERBINQ96RT1 1412 aa27.18■■□□□ 1.94
MSH6-203ENST00000420813 CFAP65Q6ZU64 1925 aaKnown RBP27.18■■□□□ 1.94
MSH6-203ENST00000420813 DAPK1P53355 1430 aa27.17■■□□□ 1.94
MSH6-203ENST00000420813 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
MSH6-203ENST00000420813 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
MSH6-203ENST00000420813 THEMISQ8N1K5 641 aaPredicted RBP27.16■■□□□ 1.94
MSH6-203ENST00000420813 ERVK-7P63135 1459 aa27.16■■□□□ 1.94
MSH6-203ENST00000420813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.13■■□□□ 1.934e-9■■□□□ 12.3
MSH6-203ENST00000420813 ANKLE2Q86XL3 938 aa27.12■■□□□ 1.93
MSH6-203ENST00000420813 MED14O60244 1454 aa27.11■■□□□ 1.93
MSH6-203ENST00000420813 ARHGAP31Q2M1Z3 1444 aa27.09■■□□□ 1.93
MSH6-203ENST00000420813 RRP7BPQ9NSQ0 103 aa27.09■■□□□ 1.93
MSH6-203ENST00000420813 CPS1P31327 1500 aa27.08■■□□□ 1.93
MSH6-203ENST00000420813 UBR1Q8IWV7 1749 aa27.07■■□□□ 1.92
MSH6-203ENST00000420813 IQGAP1P46940 1657 aa27.07■■□□□ 1.92
MSH6-203ENST00000420813 ANKRD30AQ9BXX3 1397 aa27.07■■□□□ 1.92
MSH6-203ENST00000420813 NPHP4O75161 1426 aaPredicted RBP27.06■■□□□ 1.92
MSH6-203ENST00000420813 VWDEQ8N2E2 1590 aa27.04■■□□□ 1.92
MSH6-203ENST00000420813 ADGRL2O95490 1459 aa27.01■■□□□ 1.91
MSH6-203ENST00000420813 KANK1Q14678 1352 aa27.01■■□□□ 1.91
MSH6-203ENST00000420813 UBAP1LF5GYI3 381 aa27.01■■□□□ 1.91
MSH6-203ENST00000420813 LMTK2Q8IWU2 1503 aa27■■□□□ 1.91
MSH6-203ENST00000420813 CHIC2Q9UKJ5 165 aa26.98■■□□□ 1.91
MSH6-203ENST00000420813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.96■■□□□ 1.913e-6■■■■□ 22.4
MSH6-203ENST00000420813 SLIT1O75093 1534 aa26.95■■□□□ 1.91
MSH6-203ENST00000420813 KDM5AP29375 1690 aaKnown RBP26.95■■□□□ 1.91
MSH6-203ENST00000420813 PIK3C2BO00750 1634 aa26.94■■□□□ 1.9
MSH6-203ENST00000420813 ARHGAP23Q9P227 1491 aa26.94■■□□□ 1.9
MSH6-203ENST00000420813 SCAF11Q99590 1463 aaKnown RBP26.93■■□□□ 1.9
MSH6-203ENST00000420813 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
MSH6-203ENST00000420813 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
MSH6-203ENST00000420813 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
MSH6-203ENST00000420813 FAM50AQ14320 339 aaKnown RBP26.9■■□□□ 1.9
MSH6-203ENST00000420813 SYNMO15061 1565 aa26.89■■□□□ 1.9
MSH6-203ENST00000420813 TOM1O60784 492 aa26.87■■□□□ 1.89
MSH6-203ENST00000420813 ANKRD50Q9ULJ7 1429 aa26.87■■□□□ 1.89
MSH6-203ENST00000420813 NOS1P29475 1434 aa26.84■■□□□ 1.89
MSH6-203ENST00000420813 LTKP29376 864 aa26.83■■□□□ 1.89
MSH6-203ENST00000420813 TXNDC2Q86VQ3 553 aa26.83■■□□□ 1.89
MSH6-203ENST00000420813 TMEM2Q9UHN6 1383 aa26.83■■□□□ 1.88
MSH6-203ENST00000420813 RPRD2Q5VT52 1461 aaKnown RBP26.82■■□□□ 1.88
MSH6-203ENST00000420813 LRRC7Q96NW7 1537 aa26.82■■□□□ 1.88
MSH6-203ENST00000420813 EID1Q9Y6B2 187 aa26.82■■□□□ 1.88
MSH6-203ENST00000420813 TET3O43151 1660 aa26.82■■□□□ 1.88
MSH6-203ENST00000420813 ALKQ9UM73 1620 aa26.8■■□□□ 1.88
MSH6-203ENST00000420813 STAG3Q9UJ98 1225 aa26.8■■□□□ 1.88
MSH6-203ENST00000420813 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
MSH6-203ENST00000420813 IDI1Q13907 227 aa26.79■■□□□ 1.88
MSH6-203ENST00000420813 ADGRB3O60242 1522 aa26.79■■□□□ 1.88
MSH6-203ENST00000420813 UNC13BO14795 1591 aa26.79■■□□□ 1.88
MSH6-203ENST00000420813 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
MSH6-203ENST00000420813 SCAF1Q9H7N4 1312 aaKnown RBP26.76■■□□□ 1.87
MSH6-203ENST00000420813 PIP4K2BP78356 416 aa26.76■■□□□ 1.87
MSH6-203ENST00000420813 SLC52A1Q9NWF4 448 aa26.75■■□□□ 1.87
MSH6-203ENST00000420813 XIRP1Q702N8 1843 aaKnown RBP26.74■■□□□ 1.87
MSH6-203ENST00000420813 ILDR2Q71H61 639 aa26.73■■□□□ 1.87
MSH6-203ENST00000420813 HSPA1LP34931 641 aa26.72■■□□□ 1.87
MSH6-203ENST00000420813 MYO5BQ9ULV0 1848 aa26.72■■□□□ 1.87
MSH6-203ENST00000420813 IQGAP3Q86VI3 1631 aa26.68■■□□□ 1.86
MSH6-203ENST00000420813 E9PCH4 1651 aa26.67■■□□□ 1.86
MSH6-203ENST00000420813 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
MSH6-203ENST00000420813 ZFYVE9O95405 1425 aa26.62■■□□□ 1.85
MSH6-203ENST00000420813 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
MSH6-203ENST00000420813 NWD1Q149M9 1564 aa26.61■■□□□ 1.85
MSH6-203ENST00000420813 SOCS7O14512 581 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms