RNA–Protein interactions for RNA: ENST00000416682.6

MARK3-204, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-204ENST00000416682 ZMYND15Q9H091 742 aa21.51■■□□□ 1.03
MARK3-204ENST00000416682 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
MARK3-204ENST00000416682 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
MARK3-204ENST00000416682 KDM5CP41229 1560 aa21.5■■□□□ 1.03
MARK3-204ENST00000416682 TMC1Q8TDI8 760 aa21.49■■□□□ 1.03
MARK3-204ENST00000416682 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
MARK3-204ENST00000416682 NUP155O75694 1391 aa21.49■■□□□ 1.03
MARK3-204ENST00000416682 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
MARK3-204ENST00000416682 ARID4BQ4LE39 1312 aaPredicted RBP21.46■■□□□ 1.03
MARK3-204ENST00000416682 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
MARK3-204ENST00000416682 ABCC10Q5T3U5 1492 aa21.45■■□□□ 1.02
MARK3-204ENST00000416682 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
MARK3-204ENST00000416682 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
MARK3-204ENST00000416682 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
MARK3-204ENST00000416682 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
MARK3-204ENST00000416682 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
MARK3-204ENST00000416682 A0A0U1RQG5 324 aaPredicted RBP21.43■■□□□ 1.02
MARK3-204ENST00000416682 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
MARK3-204ENST00000416682 ABCA8O94911 1581 aa21.43■■□□□ 1.02
MARK3-204ENST00000416682 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
MARK3-204ENST00000416682 ROCK2O75116 1388 aaKnown RBP21.42■■□□□ 1.02
MARK3-204ENST00000416682 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
MARK3-204ENST00000416682 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
MARK3-204ENST00000416682 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
MARK3-204ENST00000416682 GLIPR1L2Q4G1C9 344 aa21.41■■□□□ 1.02
MARK3-204ENST00000416682 DCAF11Q8TEB1 546 aa21.41■■□□□ 1.02
MARK3-204ENST00000416682 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
MARK3-204ENST00000416682 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
MARK3-204ENST00000416682 PTPRGP23470 1445 aa21.37■■□□□ 1.01
MARK3-204ENST00000416682 MYBBP1AQ9BQG0 1328 aaKnown RBP21.35■■□□□ 1.01
MARK3-204ENST00000416682 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
MARK3-204ENST00000416682 PDE4CQ08493 712 aa21.33■■□□□ 1.01
MARK3-204ENST00000416682 LRPPRCP42704 1394 aaKnown RBP21.33■■□□□ 1
MARK3-204ENST00000416682 SHANK2Q9UPX8 1470 aa21.33■■□□□ 1
MARK3-204ENST00000416682 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
MARK3-204ENST00000416682 RALBP1Q15311 655 aa21.31■■□□□ 1
MARK3-204ENST00000416682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.31■■□□□ 11e-6■■■□□ 19.1
MARK3-204ENST00000416682 USP35Q9P2H5 1018 aa21.31■■□□□ 1
MARK3-204ENST00000416682 SLC4A3P48751 1232 aa21.3■■□□□ 1
MARK3-204ENST00000416682 GSE1Q14687 1217 aa21.3■■□□□ 1
MARK3-204ENST00000416682 RGL3Q3MIN7 710 aa21.3■■□□□ 1
MARK3-204ENST00000416682 SKAP1Q86WV1 359 aa21.3■■□□□ 1
MARK3-204ENST00000416682 PDE4AP27815 886 aa21.29■■□□□ 1
MARK3-204ENST00000416682 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
MARK3-204ENST00000416682 KDM5DQ9BY66 1539 aa21.28■■□□□ 1
MARK3-204ENST00000416682 RRP1P56182 461 aaKnown RBP21.26■□□□□ 0.99
MARK3-204ENST00000416682 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
MARK3-204ENST00000416682 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
MARK3-204ENST00000416682 KTN1Q86UP2 1357 aaKnown RBP21.25■□□□□ 0.99
MARK3-204ENST00000416682 EXOC6Q8TAG9 804 aa21.25■□□□□ 0.99
MARK3-204ENST00000416682 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
MARK3-204ENST00000416682 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
MARK3-204ENST00000416682 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
MARK3-204ENST00000416682 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
MARK3-204ENST00000416682 CDC42BPBQ9Y5S2 1711 aa21.22■□□□□ 0.99
MARK3-204ENST00000416682 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
MARK3-204ENST00000416682 NFKBIBQ15653 356 aa21.22■□□□□ 0.99
MARK3-204ENST00000416682 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
MARK3-204ENST00000416682 CCDC141Q6ZP82 1450 aa21.21■□□□□ 0.99
MARK3-204ENST00000416682 CCDC144AA2RUR9 1427 aa21.2■□□□□ 0.98
MARK3-204ENST00000416682 E9PCH4 1651 aa21.2■□□□□ 0.98
MARK3-204ENST00000416682 FGD1P98174 961 aa21.2■□□□□ 0.98
MARK3-204ENST00000416682 SYCP2Q9BX26 1530 aa21.19■□□□□ 0.98
MARK3-204ENST00000416682 PRAG1Q86YV5 1406 aa21.19■□□□□ 0.98
MARK3-204ENST00000416682 PARD3Q8TEW0 1356 aa21.19■□□□□ 0.98
MARK3-204ENST00000416682 PDIA4P13667 645 aaKnown RBP21.18■□□□□ 0.98
MARK3-204ENST00000416682 BACH2Q9BYV9 841 aa21.18■□□□□ 0.98
MARK3-204ENST00000416682 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
MARK3-204ENST00000416682 CDCA7LQ96GN5 454 aa21.17■□□□□ 0.98
MARK3-204ENST00000416682 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
MARK3-204ENST00000416682 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
MARK3-204ENST00000416682 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
MARK3-204ENST00000416682 ARHGAP5Q13017 1502 aa21.15■□□□□ 0.98
MARK3-204ENST00000416682 RBM10P98175 930 aaKnown RBP21.15■□□□□ 0.98
MARK3-204ENST00000416682 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
MARK3-204ENST00000416682 CHD1O14646 1710 aa21.14■□□□□ 0.98
MARK3-204ENST00000416682 TCERG1O14776 1098 aaKnown RBP21.14■□□□□ 0.97
MARK3-204ENST00000416682 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.97
MARK3-204ENST00000416682 PREX2Q70Z35 1606 aa21.14■□□□□ 0.97
MARK3-204ENST00000416682 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.97
MARK3-204ENST00000416682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.975e-6■□□□□ 9.5
MARK3-204ENST00000416682 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
MARK3-204ENST00000416682 DISP3Q9P2K9 1392 aa21.13■□□□□ 0.97
MARK3-204ENST00000416682 PDE3BQ13370 1112 aa21.12■□□□□ 0.97
MARK3-204ENST00000416682 AAMPQ13685 434 aa21.12■□□□□ 0.97
MARK3-204ENST00000416682 PLIN1O60240 522 aa21.11■□□□□ 0.97
MARK3-204ENST00000416682 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
MARK3-204ENST00000416682 A2MP01023 1474 aa21.11■□□□□ 0.97
MARK3-204ENST00000416682 PANK3Q9H999 370 aa21.1■□□□□ 0.97
MARK3-204ENST00000416682 TESK2Q96S53 571 aa21.09■□□□□ 0.97
MARK3-204ENST00000416682 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
MARK3-204ENST00000416682 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
MARK3-204ENST00000416682 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.96
MARK3-204ENST00000416682 FRAT2O75474 233 aaPredicted RBP21.06■□□□□ 0.96
MARK3-204ENST00000416682 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
MARK3-204ENST00000416682 TMF1P82094 1093 aa21.03■□□□□ 0.96
MARK3-204ENST00000416682 PRDM15P57071 1507 aaPredicted RBP21.02■□□□□ 0.96
MARK3-204ENST00000416682 FAM43AQ8N2R8 423 aa21.01■□□□□ 0.95
MARK3-204ENST00000416682 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
MARK3-204ENST00000416682 BLMP54132 1417 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms