RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
ACTB-202ENST00000414620 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
ACTB-202ENST00000414620 APLP2Q06481 763 aa24.46■■□□□ 1.51
ACTB-202ENST00000414620 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
ACTB-202ENST00000414620 PTPRTO14522 1441 aa24.45■■□□□ 1.51
ACTB-202ENST00000414620 RNF17Q9BXT8 1623 aaKnown RBP24.44■■□□□ 1.5
ACTB-202ENST00000414620 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
ACTB-202ENST00000414620 EIF2AK4Q9P2K8 1649 aaKnown RBP24.43■■□□□ 1.5
ACTB-202ENST00000414620 CEP152O94986 1710 aa24.41■■□□□ 1.5
ACTB-202ENST00000414620 PZPP20742 1482 aa24.4■■□□□ 1.5
ACTB-202ENST00000414620 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
ACTB-202ENST00000414620 ZC3H13Q5T200 1668 aaKnown RBP24.4■■□□□ 1.5
ACTB-202ENST00000414620 NCKAP5LQ9HCH0 1330 aa24.38■■□□□ 1.49
ACTB-202ENST00000414620 WASHC2CQ9Y4E1 1318 aa24.38■■□□□ 1.49
ACTB-202ENST00000414620 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
ACTB-202ENST00000414620 MROH1Q8NDA8 1641 aa24.37■■□□□ 1.49
ACTB-202ENST00000414620 FBXO31Q5XUX0 539 aaPredicted RBP24.37■■□□□ 1.49
ACTB-202ENST00000414620 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
ACTB-202ENST00000414620 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
ACTB-202ENST00000414620 CFAP65Q6ZU64 1925 aaKnown RBP24.37■■□□□ 1.49
ACTB-202ENST00000414620 TNRQ92752 1358 aa24.36■■□□□ 1.49
ACTB-202ENST00000414620 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
ACTB-202ENST00000414620 ABCC3O15438 1527 aa24.35■■□□□ 1.49
ACTB-202ENST00000414620 DUOX2Q9NRD8 1548 aa24.34■■□□□ 1.49
ACTB-202ENST00000414620 ABCC5O15440 1437 aa24.34■■□□□ 1.49
ACTB-202ENST00000414620 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.49
ACTB-202ENST00000414620 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
ACTB-202ENST00000414620 TCOF1Q13428 1488 aaKnown RBP24.32■■□□□ 1.48
ACTB-202ENST00000414620 DAPK1P53355 1430 aa24.31■■□□□ 1.48
ACTB-202ENST00000414620 KIF15Q9NS87 1388 aa24.29■■□□□ 1.48
ACTB-202ENST00000414620 PKD2Q13563 968 aa24.28■■□□□ 1.48
ACTB-202ENST00000414620 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
ACTB-202ENST00000414620 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
ACTB-202ENST00000414620 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
ACTB-202ENST00000414620 ZNF335Q9H4Z2 1342 aaPredicted RBP24.25■■□□□ 1.47
ACTB-202ENST00000414620 PRDM15P57071 1507 aaPredicted RBP24.25■■□□□ 1.47
ACTB-202ENST00000414620 NLRP1Q9C000 1473 aa24.24■■□□□ 1.47
ACTB-202ENST00000414620 UGGT1Q9NYU2 1555 aa24.24■■□□□ 1.47
ACTB-202ENST00000414620 ERBINQ96RT1 1412 aa24.23■■□□□ 1.47
ACTB-202ENST00000414620 ERVK-7P63135 1459 aa24.23■■□□□ 1.47
ACTB-202ENST00000414620 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
ACTB-202ENST00000414620 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
ACTB-202ENST00000414620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.464e-28■■□□□ 12.2
ACTB-202ENST00000414620 IQSEC2Q5JU85 1478 aa24.19■■□□□ 1.46
ACTB-202ENST00000414620 UBR1Q8IWV7 1749 aa24.17■■□□□ 1.46
ACTB-202ENST00000414620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.16■■□□□ 1.46
ACTB-202ENST00000414620 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
ACTB-202ENST00000414620 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
ACTB-202ENST00000414620 IQGAP1P46940 1657 aa24.14■■□□□ 1.45
ACTB-202ENST00000414620 THEMISQ8N1K5 641 aaPredicted RBP24.13■■□□□ 1.45
ACTB-202ENST00000414620 ANKLE2Q86XL3 938 aa24.11■■□□□ 1.45
ACTB-202ENST00000414620 ADGRL2O95490 1459 aa24.11■■□□□ 1.45
ACTB-202ENST00000414620 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
ACTB-202ENST00000414620 KANK1Q14678 1352 aa24.09■■□□□ 1.45
ACTB-202ENST00000414620 PIK3C2BO00750 1634 aa24.09■■□□□ 1.45
ACTB-202ENST00000414620 ARHGAP31Q2M1Z3 1444 aa24.09■■□□□ 1.45
ACTB-202ENST00000414620 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.45
ACTB-202ENST00000414620 MED14O60244 1454 aa24.07■■□□□ 1.44
ACTB-202ENST00000414620 LMTK2Q8IWU2 1503 aa24.05■■□□□ 1.44
ACTB-202ENST00000414620 STRCP1A6NGW2 1772 aa24.04■■□□□ 1.44
ACTB-202ENST00000414620 CPS1P31327 1500 aa24.04■■□□□ 1.44
ACTB-202ENST00000414620 UBAP1LF5GYI3 381 aa24.03■■□□□ 1.44
ACTB-202ENST00000414620 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
ACTB-202ENST00000414620 SYNMO15061 1565 aa24.01■■□□□ 1.43
ACTB-202ENST00000414620 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
ACTB-202ENST00000414620 ANKRD50Q9ULJ7 1429 aa24■■□□□ 1.43
ACTB-202ENST00000414620 SCAF11Q99590 1463 aaKnown RBP23.99■■□□□ 1.43
ACTB-202ENST00000414620 SLIT1O75093 1534 aa23.98■■□□□ 1.43
ACTB-202ENST00000414620 ARHGAP23Q9P227 1491 aa23.97■■□□□ 1.43
ACTB-202ENST00000414620 TET3O43151 1660 aa23.96■■□□□ 1.43
ACTB-202ENST00000414620 KDM5AP29375 1690 aaKnown RBP23.96■■□□□ 1.43
ACTB-202ENST00000414620 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
ACTB-202ENST00000414620 UNC13BO14795 1591 aa23.96■■□□□ 1.43
ACTB-202ENST00000414620 MYO5BQ9ULV0 1848 aa23.96■■□□□ 1.43
ACTB-202ENST00000414620 STAG3Q9UJ98 1225 aa23.93■■□□□ 1.42
ACTB-202ENST00000414620 LTKP29376 864 aa23.92■■□□□ 1.42
ACTB-202ENST00000414620 TXNDC2Q86VQ3 553 aa23.92■■□□□ 1.42
ACTB-202ENST00000414620 NOS1P29475 1434 aa23.92■■□□□ 1.42
ACTB-202ENST00000414620 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
ACTB-202ENST00000414620 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
ACTB-202ENST00000414620 ITGAEP38570 1179 aa23.9■■□□□ 1.42
ACTB-202ENST00000414620 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
ACTB-202ENST00000414620 IDI1Q13907 227 aa23.89■■□□□ 1.41
ACTB-202ENST00000414620 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
ACTB-202ENST00000414620 E9PCH4 1651 aa23.89■■□□□ 1.41
ACTB-202ENST00000414620 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
ACTB-202ENST00000414620 EID1Q9Y6B2 187 aa23.87■■□□□ 1.41
ACTB-202ENST00000414620 LRRC7Q96NW7 1537 aa23.87■■□□□ 1.41
ACTB-202ENST00000414620 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
ACTB-202ENST00000414620 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
ACTB-202ENST00000414620 IQGAP3Q86VI3 1631 aa23.86■■□□□ 1.41
ACTB-202ENST00000414620 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
ACTB-202ENST00000414620 ALKQ9UM73 1620 aa23.85■■□□□ 1.41
ACTB-202ENST00000414620 TOM1O60784 492 aa23.83■■□□□ 1.41
ACTB-202ENST00000414620 TMEM131LA2VDJ0 1609 aa23.8■■□□□ 1.4
ACTB-202ENST00000414620 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
ACTB-202ENST00000414620 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
ACTB-202ENST00000414620 HSPA1LP34931 641 aa23.76■■□□□ 1.39
ACTB-202ENST00000414620 NUP155O75694 1391 aa23.74■■□□□ 1.39
ACTB-202ENST00000414620 ILDR2Q71H61 639 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms