RNA–Protein interactions for RNA: ENST00000413748.6

SCG5-202, Transcript of secretogranin V, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCG5, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-202ENST00000413748 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
SCG5-202ENST00000413748 RTEL1-TNFRSF6BF6WH68 1400 aa15.89■□□□□ 0.13
SCG5-202ENST00000413748 HSPA1LP34931 641 aa15.89■□□□□ 0.13
SCG5-202ENST00000413748 VWDEQ8N2E2 1590 aa15.88■□□□□ 0.13
SCG5-202ENST00000413748 PZPP20742 1482 aa15.88■□□□□ 0.13
SCG5-202ENST00000413748 CPS1P31327 1500 aa15.88■□□□□ 0.13
SCG5-202ENST00000413748 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
SCG5-202ENST00000413748 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
SCG5-202ENST00000413748 KDM5DQ9BY66 1539 aa15.87■□□□□ 0.13
SCG5-202ENST00000413748 TNRQ92752 1358 aa15.87■□□□□ 0.13
SCG5-202ENST00000413748 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
SCG5-202ENST00000413748 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
SCG5-202ENST00000413748 PIP4K2BP78356 416 aa15.84■□□□□ 0.13
SCG5-202ENST00000413748 STRCP1A6NGW2 1772 aa15.84■□□□□ 0.13
SCG5-202ENST00000413748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCG5-202ENST00000413748 CAMSAP2Q08AD1 1489 aa15.83■□□□□ 0.12
SCG5-202ENST00000413748 CCDC141Q6ZP82 1450 aa15.83■□□□□ 0.12
SCG5-202ENST00000413748 DEPDC5O75140 1603 aa15.83■□□□□ 0.12
SCG5-202ENST00000413748 KIF3BO15066 747 aa15.82■□□□□ 0.12
SCG5-202ENST00000413748 MED14O60244 1454 aa15.82■□□□□ 0.12
SCG5-202ENST00000413748 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
SCG5-202ENST00000413748 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
SCG5-202ENST00000413748 UGGT1Q9NYU2 1555 aa15.79■□□□□ 0.12
SCG5-202ENST00000413748 NCOA2Q15596 1464 aa15.79■□□□□ 0.12
SCG5-202ENST00000413748 NLRP1Q9C000 1473 aa15.79■□□□□ 0.12
SCG5-202ENST00000413748 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
SCG5-202ENST00000413748 NPHP4O75161 1426 aaPredicted RBP15.78■□□□□ 0.12
SCG5-202ENST00000413748 TOM1O60784 492 aa15.78■□□□□ 0.12
SCG5-202ENST00000413748 RNF17Q9BXT8 1623 aaKnown RBP15.78■□□□□ 0.12
SCG5-202ENST00000413748 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
SCG5-202ENST00000413748 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
SCG5-202ENST00000413748 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
SCG5-202ENST00000413748 ABCC3O15438 1527 aa15.76■□□□□ 0.11
SCG5-202ENST00000413748 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
SCG5-202ENST00000413748 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
SCG5-202ENST00000413748 ZC3H13Q5T200 1668 aaKnown RBP15.75■□□□□ 0.11
SCG5-202ENST00000413748 MROH1Q8NDA8 1641 aa15.75■□□□□ 0.11
SCG5-202ENST00000413748 SYNMO15061 1565 aa15.72■□□□□ 0.11
SCG5-202ENST00000413748 ERVK-7P63135 1459 aa15.71■□□□□ 0.11
SCG5-202ENST00000413748 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
SCG5-202ENST00000413748 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
SCG5-202ENST00000413748 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
SCG5-202ENST00000413748 EIF2AK4Q9P2K8 1649 aaKnown RBP15.7■□□□□ 0.1
SCG5-202ENST00000413748 RSPH4AQ5TD94 716 aa15.7■□□□□ 0.1
SCG5-202ENST00000413748 CEP152O94986 1710 aa15.7■□□□□ 0.1
SCG5-202ENST00000413748 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
SCG5-202ENST00000413748 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
SCG5-202ENST00000413748 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
SCG5-202ENST00000413748 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
SCG5-202ENST00000413748 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
SCG5-202ENST00000413748 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
SCG5-202ENST00000413748 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
SCG5-202ENST00000413748 SCAF11Q99590 1463 aaKnown RBP15.65■□□□□ 0.1
SCG5-202ENST00000413748 SLIT1O75093 1534 aa15.64■□□□□ 0.09
SCG5-202ENST00000413748 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
SCG5-202ENST00000413748 LTKP29376 864 aa15.63■□□□□ 0.09
SCG5-202ENST00000413748 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
SCG5-202ENST00000413748 PIK3C2BO00750 1634 aa15.6■□□□□ 0.09
SCG5-202ENST00000413748 DUOX2Q9NRD8 1548 aa15.59■□□□□ 0.09
SCG5-202ENST00000413748 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
SCG5-202ENST00000413748 KANK4Q5T7N3 995 aaPredicted RBP15.58■□□□□ 0.08
SCG5-202ENST00000413748 CROCC2H7BZ55 1655 aa15.57■□□□□ 0.08
SCG5-202ENST00000413748 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
SCG5-202ENST00000413748 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
SCG5-202ENST00000413748 TXNDC2Q86VQ3 553 aa15.56■□□□□ 0.08
SCG5-202ENST00000413748 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
SCG5-202ENST00000413748 TMEM2Q9UHN6 1383 aa15.54■□□□□ 0.08
SCG5-202ENST00000413748 TET3O43151 1660 aa15.54■□□□□ 0.08
SCG5-202ENST00000413748 FAM135BQ49AJ0 1406 aa15.53■□□□□ 0.08
SCG5-202ENST00000413748 KIF15Q9NS87 1388 aa15.53■□□□□ 0.08
SCG5-202ENST00000413748 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
SCG5-202ENST00000413748 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
SCG5-202ENST00000413748 ABCC5O15440 1437 aa15.52■□□□□ 0.08
SCG5-202ENST00000413748 ERBINQ96RT1 1412 aa15.52■□□□□ 0.08
SCG5-202ENST00000413748 TMEM94Q12767 1356 aa15.51■□□□□ 0.07
SCG5-202ENST00000413748 POTEAQ6S8J7 498 aa15.51■□□□□ 0.07
SCG5-202ENST00000413748 EFCAB6Q5THR3 1501 aa15.5■□□□□ 0.07
SCG5-202ENST00000413748 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
SCG5-202ENST00000413748 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
SCG5-202ENST00000413748 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
SCG5-202ENST00000413748 PTPN23Q9H3S7 1636 aa15.48■□□□□ 0.07
SCG5-202ENST00000413748 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
SCG5-202ENST00000413748 EID1Q9Y6B2 187 aa15.48■□□□□ 0.07
SCG5-202ENST00000413748 IDI1Q13907 227 aa15.47■□□□□ 0.07
SCG5-202ENST00000413748 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.07
SCG5-202ENST00000413748 DAPK1P53355 1430 aa15.46■□□□□ 0.07
SCG5-202ENST00000413748 KCNA6P17658 529 aa15.46■□□□□ 0.07
SCG5-202ENST00000413748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
SCG5-202ENST00000413748 NOS1P29475 1434 aa15.45■□□□□ 0.06
SCG5-202ENST00000413748 ADGRB3O60242 1522 aa15.45■□□□□ 0.06
SCG5-202ENST00000413748 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
SCG5-202ENST00000413748 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
SCG5-202ENST00000413748 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
SCG5-202ENST00000413748 MYO5BQ9ULV0 1848 aa15.43■□□□□ 0.06
SCG5-202ENST00000413748 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
SCG5-202ENST00000413748 PHLPP1O60346 1717 aa15.42■□□□□ 0.06
SCG5-202ENST00000413748 CHD2O14647 1828 aaKnown RBP15.41■□□□□ 0.06
SCG5-202ENST00000413748 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
SCG5-202ENST00000413748 KANK1Q14678 1352 aa15.4■□□□□ 0.06
SCG5-202ENST00000413748 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms