RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 NPATQ14207 1427 aa24.17■■□□□ 1.46
ATG4B-202ENST00000400771 UHRF1BP1Q6BDS2 1440 aa24.14■■□□□ 1.45
ATG4B-202ENST00000400771 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.45
ATG4B-202ENST00000400771 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
ATG4B-202ENST00000400771 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
ATG4B-202ENST00000400771 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
ATG4B-202ENST00000400771 ZMYM3Q14202 1370 aa24.13■■□□□ 1.45
ATG4B-202ENST00000400771 ABCC3O15438 1527 aa24.12■■□□□ 1.45
ATG4B-202ENST00000400771 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
ATG4B-202ENST00000400771 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
ATG4B-202ENST00000400771 HSPA2P54652 639 aa24.11■■□□□ 1.45
ATG4B-202ENST00000400771 GGT6Q6P531 493 aa24.1■■□□□ 1.45
ATG4B-202ENST00000400771 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
ATG4B-202ENST00000400771 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
ATG4B-202ENST00000400771 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.45
ATG4B-202ENST00000400771 PZPP20742 1482 aa24.08■■□□□ 1.45
ATG4B-202ENST00000400771 KIF3BO15066 747 aa24.08■■□□□ 1.45
ATG4B-202ENST00000400771 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.45
ATG4B-202ENST00000400771 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
ATG4B-202ENST00000400771 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
ATG4B-202ENST00000400771 NCOA1Q15788 1441 aa24.02■■□□□ 1.44
ATG4B-202ENST00000400771 SPATA31D1Q6ZQQ2 1576 aa24.01■■□□□ 1.43
ATG4B-202ENST00000400771 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
ATG4B-202ENST00000400771 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
ATG4B-202ENST00000400771 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
ATG4B-202ENST00000400771 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
ATG4B-202ENST00000400771 UNC13BO14795 1591 aa23.95■■□□□ 1.42
ATG4B-202ENST00000400771 RRP7BPQ9NSQ0 103 aa23.94■■□□□ 1.42
ATG4B-202ENST00000400771 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
ATG4B-202ENST00000400771 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
ATG4B-202ENST00000400771 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
ATG4B-202ENST00000400771 PLA2R1Q13018 1463 aa23.93■■□□□ 1.42
ATG4B-202ENST00000400771 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
ATG4B-202ENST00000400771 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
ATG4B-202ENST00000400771 TNRQ92752 1358 aa23.91■■□□□ 1.42
ATG4B-202ENST00000400771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.425e-9■■■■□ 24.7
ATG4B-202ENST00000400771 PPARGC1BQ86YN6 1023 aaKnown RBP23.91■■□□□ 1.42
ATG4B-202ENST00000400771 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
ATG4B-202ENST00000400771 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
ATG4B-202ENST00000400771 FBXO31Q5XUX0 539 aaPredicted RBP23.89■■□□□ 1.41
ATG4B-202ENST00000400771 UBR1Q8IWV7 1749 aa23.88■■□□□ 1.41
ATG4B-202ENST00000400771 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
ATG4B-202ENST00000400771 ARHGAP31Q2M1Z3 1444 aa23.88■■□□□ 1.41
ATG4B-202ENST00000400771 NLRP1Q9C000 1473 aa23.87■■□□□ 1.41
ATG4B-202ENST00000400771 GCC2Q8IWJ2 1684 aa23.87■■□□□ 1.41
ATG4B-202ENST00000400771 TET3O43151 1660 aa23.86■■□□□ 1.41
ATG4B-202ENST00000400771 ANKRD50Q9ULJ7 1429 aa23.86■■□□□ 1.41
ATG4B-202ENST00000400771 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
ATG4B-202ENST00000400771 PTPRTO14522 1441 aa23.85■■□□□ 1.41
ATG4B-202ENST00000400771 SYNMO15061 1565 aa23.84■■□□□ 1.41
ATG4B-202ENST00000400771 IQGAP3Q86VI3 1631 aa23.83■■□□□ 1.41
ATG4B-202ENST00000400771 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
ATG4B-202ENST00000400771 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
ATG4B-202ENST00000400771 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
ATG4B-202ENST00000400771 E9PCH4 1651 aa23.79■■□□□ 1.4
ATG4B-202ENST00000400771 LTBP4Q8N2S1 1624 aa23.78■■□□□ 1.4
ATG4B-202ENST00000400771 KANK1Q14678 1352 aa23.77■■□□□ 1.4
ATG4B-202ENST00000400771 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
ATG4B-202ENST00000400771 NOS1P29475 1434 aa23.73■■□□□ 1.39
ATG4B-202ENST00000400771 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
ATG4B-202ENST00000400771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.396e-14■■□□□ 12.6
ATG4B-202ENST00000400771 RPRD2Q5VT52 1461 aaKnown RBP23.72■■□□□ 1.39
ATG4B-202ENST00000400771 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
ATG4B-202ENST00000400771 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
ATG4B-202ENST00000400771 ILDR1Q86SU0 546 aaPredicted RBP23.69■■□□□ 1.38
ATG4B-202ENST00000400771 SLIT1O75093 1534 aa23.69■■□□□ 1.38
ATG4B-202ENST00000400771 MED14O60244 1454 aa23.68■■□□□ 1.38
ATG4B-202ENST00000400771 ARHGAP23Q9P227 1491 aa23.68■■□□□ 1.38
ATG4B-202ENST00000400771 ADGRB3O60242 1522 aa23.68■■□□□ 1.38
ATG4B-202ENST00000400771 PKD2Q13563 968 aa23.67■■□□□ 1.38
ATG4B-202ENST00000400771 ITGAEP38570 1179 aa23.66■■□□□ 1.38
ATG4B-202ENST00000400771 NAIPQ13075 1403 aa23.65■■□□□ 1.38
ATG4B-202ENST00000400771 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.37
ATG4B-202ENST00000400771 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
ATG4B-202ENST00000400771 TMEM131LA2VDJ0 1609 aa23.61■■□□□ 1.37
ATG4B-202ENST00000400771 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
ATG4B-202ENST00000400771 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
ATG4B-202ENST00000400771 CERKQ8TCT0 537 aa23.59■■□□□ 1.37
ATG4B-202ENST00000400771 SCAF11Q99590 1463 aaKnown RBP23.59■■□□□ 1.37
ATG4B-202ENST00000400771 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
ATG4B-202ENST00000400771 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
ATG4B-202ENST00000400771 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
ATG4B-202ENST00000400771 ZNF335Q9H4Z2 1342 aaPredicted RBP23.57■■□□□ 1.36
ATG4B-202ENST00000400771 NUP155O75694 1391 aa23.53■■□□□ 1.36
ATG4B-202ENST00000400771 ANKLE2Q86XL3 938 aa23.52■■□□□ 1.36
ATG4B-202ENST00000400771 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
ATG4B-202ENST00000400771 IDI1Q13907 227 aa23.51■■□□□ 1.35
ATG4B-202ENST00000400771 CPS1P31327 1500 aa23.5■■□□□ 1.35
ATG4B-202ENST00000400771 CLTCL1P53675 1640 aa23.49■■□□□ 1.35
ATG4B-202ENST00000400771 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
ATG4B-202ENST00000400771 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
ATG4B-202ENST00000400771 TRPM2O94759 1503 aa23.48■■□□□ 1.35
ATG4B-202ENST00000400771 LTKP29376 864 aa23.47■■□□□ 1.35
ATG4B-202ENST00000400771 SLC52A1Q9NWF4 448 aa23.44■■□□□ 1.34
ATG4B-202ENST00000400771 NWD1Q149M9 1564 aa23.42■■□□□ 1.34
ATG4B-202ENST00000400771 KIF1BO60333 1816 aa23.42■■□□□ 1.34
ATG4B-202ENST00000400771 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
ATG4B-202ENST00000400771 RIMS2Q9UQ26 1411 aa23.38■■□□□ 1.33
ATG4B-202ENST00000400771 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
ATG4B-202ENST00000400771 TXNDC2Q86VQ3 553 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms