RNA–Protein interactions for RNA: ENST00000399054.6

MKKS-202, Transcript of McKusick-Kaufman syndrome, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKKS, Length 2,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKKS-202ENST00000399054 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
MKKS-202ENST00000399054 ARID3CA6NKF2 412 aa7.54□□□□□ -1.2
MKKS-202ENST00000399054 KDM6BO15054 1643 aa7.54□□□□□ -1.2
MKKS-202ENST00000399054 CD44P16070 742 aaKnown RBP7.54□□□□□ -1.2
MKKS-202ENST00000399054 ZNF326Q5BKZ1 582 aaKnown RBP7.54□□□□□ -1.2
MKKS-202ENST00000399054 FRAT1Q92837 279 aaPredicted RBP7.54□□□□□ -1.2
MKKS-202ENST00000399054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.53□□□□□ -1.2
MKKS-202ENST00000399054 PNISRQ8TF01 805 aaKnown RBP7.53□□□□□ -1.2
MKKS-202ENST00000399054 FMN1Q68DA7 1419 aa7.53□□□□□ -1.2
MKKS-202ENST00000399054 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
MKKS-202ENST00000399054 ZNF467Q7Z7K2 595 aaPredicted RBP7.53□□□□□ -1.2
MKKS-202ENST00000399054 DNAJC5Q9H3Z4 198 aa7.53□□□□□ -1.2
MKKS-202ENST00000399054 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.21
MKKS-202ENST00000399054 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
MKKS-202ENST00000399054 ZRANB1Q9UGI0 708 aa7.52□□□□□ -1.21
MKKS-202ENST00000399054 RRP1P56182 461 aaKnown RBP7.51□□□□□ -1.21
MKKS-202ENST00000399054 CDCA7LQ96GN5 454 aa7.51□□□□□ -1.21
MKKS-202ENST00000399054 CASKIN1Q8WXD9 1431 aa7.51□□□□□ -1.21
MKKS-202ENST00000399054 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
MKKS-202ENST00000399054 TCERG1O14776 1098 aaKnown RBP7.5□□□□□ -1.21
MKKS-202ENST00000399054 ZNF579Q8NAF0 562 aaKnown RBP7.5□□□□□ -1.21
MKKS-202ENST00000399054 DCAF11Q8TEB1 546 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 KIF12Q96FN5 646 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 USP35Q9P2H5 1018 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 SPATA31E1Q6ZUB1 1445 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 CFTRP13569 1480 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 FGD5Q6ZNL6 1462 aa7.5□□□□□ -1.21
MKKS-202ENST00000399054 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
MKKS-202ENST00000399054 RCAN3Q9UKA8 241 aa7.49□□□□□ -1.21
MKKS-202ENST00000399054 KDM2AQ9Y2K7 1162 aa7.49□□□□□ -1.21
MKKS-202ENST00000399054 PPM1GO15355 546 aaPredicted RBP7.48□□□□□ -1.21
MKKS-202ENST00000399054 MYOM3Q5VTT5 1437 aa7.48□□□□□ -1.21
MKKS-202ENST00000399054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.48□□□□□ -1.21
MKKS-202ENST00000399054 FRAT2O75474 233 aaPredicted RBP7.48□□□□□ -1.21
MKKS-202ENST00000399054 ZFP91Q96JP5 570 aaPredicted RBP7.48□□□□□ -1.21
MKKS-202ENST00000399054 MAP3K13O43283 966 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 PCDHB13Q9Y5F0 798 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 STK25O00506 426 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 C20orf194Q5TEA3 1177 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 PCDHB8Q9UN66 801 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 RAD54L2Q9Y4B4 1467 aa7.47□□□□□ -1.21
MKKS-202ENST00000399054 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.21
MKKS-202ENST00000399054 PDAP1Q13442 181 aaKnown RBP7.46□□□□□ -1.21
MKKS-202ENST00000399054 BCORL1Q5H9F3 1711 aa7.46□□□□□ -1.21
MKKS-202ENST00000399054 CRBNQ96SW2 442 aa7.46□□□□□ -1.22
MKKS-202ENST00000399054 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.22
MKKS-202ENST00000399054 IFNL1Q8IU54 200 aa7.45□□□□□ -1.22
MKKS-202ENST00000399054 PHF12Q96QT6 1004 aa7.45□□□□□ -1.22
MKKS-202ENST00000399054 ZNF644Q9H582 1327 aaPredicted RBP7.45□□□□□ -1.22
MKKS-202ENST00000399054 HOMEZQ8IX15 550 aa7.45□□□□□ -1.22
MKKS-202ENST00000399054 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
MKKS-202ENST00000399054 MAGI3Q5TCQ9 1506 aa7.44□□□□□ -1.22
MKKS-202ENST00000399054 TEX14Q8IWB6 1497 aa7.44□□□□□ -1.22
MKKS-202ENST00000399054 PAXIP1Q6ZW49 1069 aaPredicted RBP7.44□□□□□ -1.22
MKKS-202ENST00000399054 SPRYD3Q8NCJ5 442 aa7.44□□□□□ -1.22
MKKS-202ENST00000399054 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
MKKS-202ENST00000399054 MS4A1P11836 297 aa7.44□□□□□ -1.22
MKKS-202ENST00000399054 STK24Q9Y6E0 443 aa7.44□□□□□ -1.22
MKKS-202ENST00000399054 USP47Q96K76 1375 aa7.43□□□□□ -1.22
MKKS-202ENST00000399054 RPRD2Q5VT52 1461 aaKnown RBP7.43□□□□□ -1.22
MKKS-202ENST00000399054 PSEN1P49768 467 aa7.43□□□□□ -1.22
MKKS-202ENST00000399054 HAX1O00165 279 aa7.42□□□□□ -1.22
MKKS-202ENST00000399054 CFAP44Q96MT7 982 aa7.42□□□□□ -1.22
MKKS-202ENST00000399054 LRPPRCP42704 1394 aaKnown RBP7.42□□□□□ -1.22
MKKS-202ENST00000399054 HECW1Q76N89 1606 aa7.42□□□□□ -1.22
MKKS-202ENST00000399054 ST20-MTHFSA0A0A6YYL1 179 aa7.41□□□□□ -1.22
MKKS-202ENST00000399054 RGS3P49796 1198 aa7.41□□□□□ -1.22
MKKS-202ENST00000399054 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
MKKS-202ENST00000399054 RRAGDQ9NQL2 400 aaPredicted RBP7.41□□□□□ -1.22
MKKS-202ENST00000399054 POGKQ9P215 609 aa7.41□□□□□ -1.22
MKKS-202ENST00000399054 C8orf34Q49A92 452 aa7.41□□□□□ -1.22
MKKS-202ENST00000399054 ABCA5Q8WWZ7 1642 aa7.4□□□□□ -1.22
MKKS-202ENST00000399054 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
MKKS-202ENST00000399054 CLCN6P51797 869 aa7.4□□□□□ -1.23
MKKS-202ENST00000399054 UGGT2Q9NYU1 1516 aa7.4□□□□□ -1.23
MKKS-202ENST00000399054 GRIN2BQ13224 1484 aa7.39□□□□□ -1.23
MKKS-202ENST00000399054 MYBBP1AQ9BQG0 1328 aaKnown RBP7.39□□□□□ -1.23
MKKS-202ENST00000399054 EFCAB5A4FU69 1503 aa7.39□□□□□ -1.23
MKKS-202ENST00000399054 CARD11Q9BXL7 1154 aa7.39□□□□□ -1.23
MKKS-202ENST00000399054 POLR1AO95602 1720 aaPredicted RBP7.39□□□□□ -1.23
MKKS-202ENST00000399054 SUPT6HQ7KZ85 1726 aaKnown RBP7.39□□□□□ -1.23
MKKS-202ENST00000399054 CC2D1BQ5T0F9 858 aaKnown RBP7.38□□□□□ -1.23
MKKS-202ENST00000399054 GCC2Q8IWJ2 1684 aa7.38□□□□□ -1.23
MKKS-202ENST00000399054 EVX2Q03828 476 aa7.38□□□□□ -1.23
MKKS-202ENST00000399054 MS4A3Q96HJ5 214 aa7.38□□□□□ -1.23
MKKS-202ENST00000399054 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
MKKS-202ENST00000399054 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
MKKS-202ENST00000399054 SEC24BO95487 1268 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 FAM43AQ8N2R8 423 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 MIA2Q96PC5 1412 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 TDRD9Q8NDG6 1382 aaKnown RBP7.37□□□□□ -1.23
MKKS-202ENST00000399054 CADPSQ9ULU8 1353 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 BRD4O60885 1362 aaPredicted RBP7.37□□□□□ -1.23
MKKS-202ENST00000399054 KIF15Q9NS87 1388 aa7.37□□□□□ -1.23
MKKS-202ENST00000399054 POTEHQ6S545 545 aa7.36□□□□□ -1.23
MKKS-202ENST00000399054 SLKQ9H2G2 1235 aaPredicted RBP7.36□□□□□ -1.23
MKKS-202ENST00000399054 RYDENQ9NUL5 291 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms