RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 CPS1P31327 1500 aa19.11■□□□□ 0.65
GAPDH-202ENST00000396856 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
GAPDH-202ENST00000396856 SHANK2Q9UPX8 1470 aa19.11■□□□□ 0.65
GAPDH-202ENST00000396856 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
GAPDH-202ENST00000396856 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
GAPDH-202ENST00000396856 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
GAPDH-202ENST00000396856 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
GAPDH-202ENST00000396856 A2MP01023 1474 aa19.09■□□□□ 0.65
GAPDH-202ENST00000396856 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
GAPDH-202ENST00000396856 GGT6Q6P531 493 aa19.09■□□□□ 0.65
GAPDH-202ENST00000396856 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.65
GAPDH-202ENST00000396856 RSPH4AQ5TD94 716 aa19.08■□□□□ 0.64
GAPDH-202ENST00000396856 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
GAPDH-202ENST00000396856 RGS17Q9UGC6 210 aaPredicted RBP19.06■□□□□ 0.64
GAPDH-202ENST00000396856 CCDC141Q6ZP82 1450 aa19.05■□□□□ 0.64
GAPDH-202ENST00000396856 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
GAPDH-202ENST00000396856 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
GAPDH-202ENST00000396856 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
GAPDH-202ENST00000396856 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
GAPDH-202ENST00000396856 POLR1AO95602 1720 aaPredicted RBP19.01■□□□□ 0.63
GAPDH-202ENST00000396856 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
GAPDH-202ENST00000396856 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
GAPDH-202ENST00000396856 ARHGEF5Q12774 1597 aa19■□□□□ 0.63
GAPDH-202ENST00000396856 MED14O60244 1454 aa18.99■□□□□ 0.63
GAPDH-202ENST00000396856 APLP2Q06481 763 aa18.99■□□□□ 0.63
GAPDH-202ENST00000396856 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
GAPDH-202ENST00000396856 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
GAPDH-202ENST00000396856 ANKLE2Q86XL3 938 aa18.98■□□□□ 0.63
GAPDH-202ENST00000396856 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
GAPDH-202ENST00000396856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
GAPDH-202ENST00000396856 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
GAPDH-202ENST00000396856 TNRQ92752 1358 aa18.96■□□□□ 0.63
GAPDH-202ENST00000396856 THEMISQ8N1K5 641 aaPredicted RBP18.94■□□□□ 0.62
GAPDH-202ENST00000396856 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
GAPDH-202ENST00000396856 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
GAPDH-202ENST00000396856 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
GAPDH-202ENST00000396856 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
GAPDH-202ENST00000396856 PZPP20742 1482 aa18.92■□□□□ 0.62
GAPDH-202ENST00000396856 FAM135AQ9P2D6 1515 aa18.92■□□□□ 0.62
GAPDH-202ENST00000396856 KIF3BO15066 747 aa18.92■□□□□ 0.62
GAPDH-202ENST00000396856 MAST1Q9Y2H9 1570 aa18.9■□□□□ 0.62
GAPDH-202ENST00000396856 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
GAPDH-202ENST00000396856 NLRP1Q9C000 1473 aa18.88■□□□□ 0.61
GAPDH-202ENST00000396856 POTEAQ6S8J7 498 aa18.87■□□□□ 0.61
GAPDH-202ENST00000396856 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
GAPDH-202ENST00000396856 UGGT1Q9NYU2 1555 aa18.87■□□□□ 0.61
GAPDH-202ENST00000396856 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
GAPDH-202ENST00000396856 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
GAPDH-202ENST00000396856 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
GAPDH-202ENST00000396856 PTPN23Q9H3S7 1636 aa18.82■□□□□ 0.6
GAPDH-202ENST00000396856 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
GAPDH-202ENST00000396856 EIF2AK4Q9P2K8 1649 aaKnown RBP18.81■□□□□ 0.6
GAPDH-202ENST00000396856 SYNMO15061 1565 aa18.81■□□□□ 0.6
GAPDH-202ENST00000396856 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
GAPDH-202ENST00000396856 ABCC5O15440 1437 aa18.78■□□□□ 0.6
GAPDH-202ENST00000396856 ZC3H13Q5T200 1668 aaKnown RBP18.78■□□□□ 0.6
GAPDH-202ENST00000396856 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
GAPDH-202ENST00000396856 CROCC2H7BZ55 1655 aa18.77■□□□□ 0.6
GAPDH-202ENST00000396856 XIRP1Q702N8 1843 aaKnown RBP18.77■□□□□ 0.59
GAPDH-202ENST00000396856 DAPK1P53355 1430 aa18.76■□□□□ 0.59
GAPDH-202ENST00000396856 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
GAPDH-202ENST00000396856 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
GAPDH-202ENST00000396856 LTKP29376 864 aa18.74■□□□□ 0.59
GAPDH-202ENST00000396856 ABCC3O15438 1527 aa18.74■□□□□ 0.59
GAPDH-202ENST00000396856 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
GAPDH-202ENST00000396856 MROH1Q8NDA8 1641 aa18.71■□□□□ 0.59
GAPDH-202ENST00000396856 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
GAPDH-202ENST00000396856 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
GAPDH-202ENST00000396856 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-202ENST00000396856 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
GAPDH-202ENST00000396856 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
GAPDH-202ENST00000396856 UBR1Q8IWV7 1749 aa18.67■□□□□ 0.58
GAPDH-202ENST00000396856 SLIT1O75093 1534 aa18.67■□□□□ 0.58
GAPDH-202ENST00000396856 TXNDC2Q86VQ3 553 aa18.66■□□□□ 0.58
GAPDH-202ENST00000396856 FAM50AQ14320 339 aaKnown RBP18.65■□□□□ 0.58
GAPDH-202ENST00000396856 CHIC2Q9UKJ5 165 aa18.65■□□□□ 0.58
GAPDH-202ENST00000396856 KANK1Q14678 1352 aa18.65■□□□□ 0.58
GAPDH-202ENST00000396856 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
GAPDH-202ENST00000396856 CEP152O94986 1710 aa18.64■□□□□ 0.57
GAPDH-202ENST00000396856 ADGRL2O95490 1459 aa18.64■□□□□ 0.57
GAPDH-202ENST00000396856 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
GAPDH-202ENST00000396856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
GAPDH-202ENST00000396856 TMEM94Q12767 1356 aa18.62■□□□□ 0.57
GAPDH-202ENST00000396856 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
GAPDH-202ENST00000396856 ROBO1Q9Y6N7 1651 aa18.61■□□□□ 0.57
GAPDH-202ENST00000396856 UPF1Q92900 1129 aaKnown RBP eCLIP18.61■□□□□ 0.57
GAPDH-202ENST00000396856 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
GAPDH-202ENST00000396856 KCNA6P17658 529 aa18.58■□□□□ 0.56
GAPDH-202ENST00000396856 TMEM2Q9UHN6 1383 aa18.56■□□□□ 0.56
GAPDH-202ENST00000396856 RBM33Q96EV2 1170 aaKnown RBP18.56■□□□□ 0.56
GAPDH-202ENST00000396856 CFAP65Q6ZU64 1925 aaKnown RBP18.56■□□□□ 0.56
GAPDH-202ENST00000396856 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
GAPDH-202ENST00000396856 TET3O43151 1660 aa18.55■□□□□ 0.56
GAPDH-202ENST00000396856 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
GAPDH-202ENST00000396856 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
GAPDH-202ENST00000396856 JCADQ9P266 1359 aa18.53■□□□□ 0.56
GAPDH-202ENST00000396856 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
GAPDH-202ENST00000396856 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
GAPDH-202ENST00000396856 EFCAB6Q5THR3 1501 aa18.5■□□□□ 0.55
GAPDH-202ENST00000396856 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms