RNA–Protein interactions for RNA: ENST00000395253.3

FAM220CP-201, Transcript of family with sequence similarity 220 member C, pseudogene, humanhuman

BASIC

Gene FAM220CP, Length 831 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220CP-201ENST00000395253 CPS1P31327 1500 aa27.42■■□□□ 1.98
FAM220CP-201ENST00000395253 GGT6Q6P531 493 aa27.42■■□□□ 1.98
FAM220CP-201ENST00000395253 SCAF1Q9H7N4 1312 aaKnown RBP27.41■■□□□ 1.98
FAM220CP-201ENST00000395253 TOM1O60784 492 aa27.41■■□□□ 1.98
FAM220CP-201ENST00000395253 HSPA1LP34931 641 aa27.39■■□□□ 1.98
FAM220CP-201ENST00000395253 MYOM3Q5VTT5 1437 aa27.38■■□□□ 1.97
FAM220CP-201ENST00000395253 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
FAM220CP-201ENST00000395253 ADGBQ8N7X0 1667 aa27.36■■□□□ 1.97
FAM220CP-201ENST00000395253 PIP4K2BP78356 416 aa27.35■■□□□ 1.97
FAM220CP-201ENST00000395253 PPARGC1BQ86YN6 1023 aaKnown RBP27.35■■□□□ 1.97
FAM220CP-201ENST00000395253 MIA2Q96PC5 1412 aa27.33■■□□□ 1.97
FAM220CP-201ENST00000395253 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
FAM220CP-201ENST00000395253 POLR1AO95602 1720 aaPredicted RBP27.32■■□□□ 1.96
FAM220CP-201ENST00000395253 NEURL4Q96JN8 1562 aa27.3■■□□□ 1.96
FAM220CP-201ENST00000395253 PHF23Q9BUL5 403 aaPredicted RBP27.29■■□□□ 1.96
FAM220CP-201ENST00000395253 TNRQ92752 1358 aa27.29■■□□□ 1.96
FAM220CP-201ENST00000395253 FAM135AQ9P2D6 1515 aa27.29■■□□□ 1.96
FAM220CP-201ENST00000395253 RTEL1-TNFRSF6BF6WH68 1400 aa27.25■■□□□ 1.95
FAM220CP-201ENST00000395253 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
FAM220CP-201ENST00000395253 PZPP20742 1482 aa27.25■■□□□ 1.95
FAM220CP-201ENST00000395253 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
FAM220CP-201ENST00000395253 CAMSAP2Q08AD1 1489 aa27.24■■□□□ 1.95
FAM220CP-201ENST00000395253 ANKLE2Q86XL3 938 aa27.23■■□□□ 1.95
FAM220CP-201ENST00000395253 DHX29Q7Z478 1369 aaKnown RBP27.22■■□□□ 1.95
FAM220CP-201ENST00000395253 KDM5DQ9BY66 1539 aa27.22■■□□□ 1.95
FAM220CP-201ENST00000395253 VWDEQ8N2E2 1590 aa27.2■■□□□ 1.94
FAM220CP-201ENST00000395253 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
FAM220CP-201ENST00000395253 MBD5Q9P267 1494 aa27.19■■□□□ 1.94
FAM220CP-201ENST00000395253 RSPH4AQ5TD94 716 aa27.19■■□□□ 1.94
FAM220CP-201ENST00000395253 THEMISQ8N1K5 641 aaPredicted RBP27.19■■□□□ 1.94
FAM220CP-201ENST00000395253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.17■■□□□ 1.94
FAM220CP-201ENST00000395253 MED14O60244 1454 aa27.17■■□□□ 1.94
FAM220CP-201ENST00000395253 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
FAM220CP-201ENST00000395253 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
FAM220CP-201ENST00000395253 FBXO31Q5XUX0 539 aaPredicted RBP27.16■■□□□ 1.94
FAM220CP-201ENST00000395253 PTPN23Q9H3S7 1636 aa27.16■■□□□ 1.94
FAM220CP-201ENST00000395253 KIF3BO15066 747 aa27.15■■□□□ 1.94
FAM220CP-201ENST00000395253 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.94
FAM220CP-201ENST00000395253 WASHC2CQ9Y4E1 1318 aa27.13■■□□□ 1.93
FAM220CP-201ENST00000395253 ALKQ9UM73 1620 aa27.12■■□□□ 1.93
FAM220CP-201ENST00000395253 FAM50AQ14320 339 aaKnown RBP27.11■■□□□ 1.93
FAM220CP-201ENST00000395253 CCDC141Q6ZP82 1450 aa27.11■■□□□ 1.93
FAM220CP-201ENST00000395253 ARHGEF5Q12774 1597 aa27.09■■□□□ 1.93
FAM220CP-201ENST00000395253 SYNMO15061 1565 aa27.08■■□□□ 1.93
FAM220CP-201ENST00000395253 RNF17Q9BXT8 1623 aaKnown RBP27.08■■□□□ 1.93
FAM220CP-201ENST00000395253 IQGAP1P46940 1657 aa27.08■■□□□ 1.92
FAM220CP-201ENST00000395253 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
FAM220CP-201ENST00000395253 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
FAM220CP-201ENST00000395253 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
FAM220CP-201ENST00000395253 LRRC7Q96NW7 1537 aa27.03■■□□□ 1.92
FAM220CP-201ENST00000395253 ABCC5O15440 1437 aa27■■□□□ 1.91
FAM220CP-201ENST00000395253 DAPK1P53355 1430 aa26.99■■□□□ 1.91
FAM220CP-201ENST00000395253 SENP3Q9H4L4 574 aaPredicted RBP26.95■■□□□ 1.9
FAM220CP-201ENST00000395253 ZC3H13Q5T200 1668 aaKnown RBP26.95■■□□□ 1.9
FAM220CP-201ENST00000395253 STRCP1A6NGW2 1772 aa26.94■■□□□ 1.9
FAM220CP-201ENST00000395253 MAST1Q9Y2H9 1570 aa26.93■■□□□ 1.9
FAM220CP-201ENST00000395253 ABCC3O15438 1527 aa26.91■■□□□ 1.9
FAM220CP-201ENST00000395253 ERVK-7P63135 1459 aa26.91■■□□□ 1.9
FAM220CP-201ENST00000395253 SCAF11Q99590 1463 aaKnown RBP26.9■■□□□ 1.9
FAM220CP-201ENST00000395253 ITGAEP38570 1179 aa26.88■■□□□ 1.89
FAM220CP-201ENST00000395253 CROCC2H7BZ55 1655 aa26.88■■□□□ 1.89
FAM220CP-201ENST00000395253 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
FAM220CP-201ENST00000395253 CHIC2Q9UKJ5 165 aa26.87■■□□□ 1.89
FAM220CP-201ENST00000395253 RGS17Q9UGC6 210 aaPredicted RBP26.86■■□□□ 1.89
FAM220CP-201ENST00000395253 EIF2AK4Q9P2K8 1649 aaKnown RBP26.84■■□□□ 1.89
FAM220CP-201ENST00000395253 ADGRL2O95490 1459 aa26.82■■□□□ 1.88
FAM220CP-201ENST00000395253 UBR1Q8IWV7 1749 aa26.82■■□□□ 1.88
FAM220CP-201ENST00000395253 ROCK1Q13464 1354 aa26.81■■□□□ 1.88
FAM220CP-201ENST00000395253 KIF15Q9NS87 1388 aa26.81■■□□□ 1.88
FAM220CP-201ENST00000395253 SLIT1O75093 1534 aa26.8■■□□□ 1.88
FAM220CP-201ENST00000395253 FAM135BQ49AJ0 1406 aa26.8■■□□□ 1.88
FAM220CP-201ENST00000395253 ARHGAP23Q9P227 1491 aa26.8■■□□□ 1.88
FAM220CP-201ENST00000395253 RRP7BPQ9NSQ0 103 aa26.79■■□□□ 1.88
FAM220CP-201ENST00000395253 TXNDC2Q86VQ3 553 aa26.77■■□□□ 1.88
FAM220CP-201ENST00000395253 EID1Q9Y6B2 187 aa26.76■■□□□ 1.87
FAM220CP-201ENST00000395253 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
FAM220CP-201ENST00000395253 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
FAM220CP-201ENST00000395253 LTKP29376 864 aa26.73■■□□□ 1.87
FAM220CP-201ENST00000395253 CEP152O94986 1710 aa26.71■■□□□ 1.87
FAM220CP-201ENST00000395253 XIRP1Q702N8 1843 aaKnown RBP26.71■■□□□ 1.87
FAM220CP-201ENST00000395253 ARHGAP31Q2M1Z3 1444 aa26.71■■□□□ 1.87
FAM220CP-201ENST00000395253 ERBINQ96RT1 1412 aa26.71■■□□□ 1.87
FAM220CP-201ENST00000395253 POTEAQ6S8J7 498 aa26.69■■□□□ 1.86
FAM220CP-201ENST00000395253 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
FAM220CP-201ENST00000395253 TMEM2Q9UHN6 1383 aa26.67■■□□□ 1.86
FAM220CP-201ENST00000395253 ANKRD50Q9ULJ7 1429 aa26.66■■□□□ 1.86
FAM220CP-201ENST00000395253 PRDM15P57071 1507 aaPredicted RBP26.66■■□□□ 1.86
FAM220CP-201ENST00000395253 ROBO1Q9Y6N7 1651 aa26.63■■□□□ 1.85
FAM220CP-201ENST00000395253 CFAP65Q6ZU64 1925 aaKnown RBP26.63■■□□□ 1.85
FAM220CP-201ENST00000395253 STAG3Q9UJ98 1225 aa26.62■■□□□ 1.85
FAM220CP-201ENST00000395253 HFM1A2PYH4 1435 aa26.62■■□□□ 1.85
FAM220CP-201ENST00000395253 KCNA6P17658 529 aa26.61■■□□□ 1.85
FAM220CP-201ENST00000395253 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
FAM220CP-201ENST00000395253 PIK3C2BO00750 1634 aa26.6■■□□□ 1.85
FAM220CP-201ENST00000395253 NKTRP30414 1462 aaKnown RBP26.6■■□□□ 1.85
FAM220CP-201ENST00000395253 KDM5AP29375 1690 aaKnown RBP26.6■■□□□ 1.85
FAM220CP-201ENST00000395253 NAIPQ13075 1403 aa26.59■■□□□ 1.85
FAM220CP-201ENST00000395253 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
FAM220CP-201ENST00000395253 PROSER2Q86WR7 435 aaPredicted RBP26.57■■□□□ 1.84
FAM220CP-201ENST00000395253 MSH6P52701 1360 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms