RNA–Protein interactions for RNA: ENST00000395253.3

FAM220CP-201, Transcript of family with sequence similarity 220 member C, pseudogene, humanhuman

BASIC

Gene FAM220CP, Length 831 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220CP-201ENST00000395253 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
FAM220CP-201ENST00000395253 ABCC9O60706 1549 aa39.3■■■■□ 3.88
FAM220CP-201ENST00000395253 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
FAM220CP-201ENST00000395253 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
FAM220CP-201ENST00000395253 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
FAM220CP-201ENST00000395253 NACADO15069 1562 aa36.8■■■■□ 3.48
FAM220CP-201ENST00000395253 PABPN1Q86U42 306 aaKnown RBP eCLIP36.43■■■■□ 3.42
FAM220CP-201ENST00000395253 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
FAM220CP-201ENST00000395253 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.39
FAM220CP-201ENST00000395253 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
FAM220CP-201ENST00000395253 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
FAM220CP-201ENST00000395253 SHROOM4Q9ULL8 1493 aa35.71■■■■□ 3.31
FAM220CP-201ENST00000395253 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
FAM220CP-201ENST00000395253 CC2D2AQ9P2K1 1620 aa35.48■■■■□ 3.27
FAM220CP-201ENST00000395253 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
FAM220CP-201ENST00000395253 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
FAM220CP-201ENST00000395253 EIF4G1Q04637 1599 aaKnown RBP35.28■■■■□ 3.24
FAM220CP-201ENST00000395253 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
FAM220CP-201ENST00000395253 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
FAM220CP-201ENST00000395253 CUX2O14529 1486 aa34.27■■■■□ 3.08
FAM220CP-201ENST00000395253 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
FAM220CP-201ENST00000395253 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
FAM220CP-201ENST00000395253 ATAD2BQ9ULI0 1458 aa33.74■■■□□ 2.99
FAM220CP-201ENST00000395253 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
FAM220CP-201ENST00000395253 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
FAM220CP-201ENST00000395253 NESP48681 1621 aa33.53■■■□□ 2.96
FAM220CP-201ENST00000395253 SMARCA4P51532 1647 aa33.52■■■□□ 2.96
FAM220CP-201ENST00000395253 THOC2Q8NI27 1593 aaKnown RBP33.4■■■□□ 2.94
FAM220CP-201ENST00000395253 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
FAM220CP-201ENST00000395253 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
FAM220CP-201ENST00000395253 LAMC3Q9Y6N6 1575 aa33.31■■■□□ 2.92
FAM220CP-201ENST00000395253 PEG3Q9GZU2 1588 aa33.25■■■□□ 2.91
FAM220CP-201ENST00000395253 PDS5BQ9NTI5 1447 aa33.17■■■□□ 2.9
FAM220CP-201ENST00000395253 KIF21AQ7Z4S6 1674 aa33.09■■■□□ 2.89
FAM220CP-201ENST00000395253 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
FAM220CP-201ENST00000395253 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
FAM220CP-201ENST00000395253 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
FAM220CP-201ENST00000395253 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
FAM220CP-201ENST00000395253 WDR62O43379 1518 aa32.83■■■□□ 2.85
FAM220CP-201ENST00000395253 CEP164Q9UPV0 1460 aa32.64■■■□□ 2.82
FAM220CP-201ENST00000395253 OSCARQ8IYS5 282 aa32.53■■■□□ 2.8
FAM220CP-201ENST00000395253 FANCD2Q9BXW9 1451 aa32.51■■■□□ 2.79
FAM220CP-201ENST00000395253 WIZO95785 1651 aa32.45■■■□□ 2.79
FAM220CP-201ENST00000395253 CFTRP13569 1480 aa32.38■■■□□ 2.77
FAM220CP-201ENST00000395253 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
FAM220CP-201ENST00000395253 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
FAM220CP-201ENST00000395253 RIMBP3CA6NJZ7 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 RIMBP3BA6NNM3 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 RIMBP3Q9UFD9 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
FAM220CP-201ENST00000395253 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
FAM220CP-201ENST00000395253 ARHGEF11O15085 1522 aa32.01■■■□□ 2.72
FAM220CP-201ENST00000395253 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
FAM220CP-201ENST00000395253 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
FAM220CP-201ENST00000395253 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
FAM220CP-201ENST00000395253 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
FAM220CP-201ENST00000395253 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
FAM220CP-201ENST00000395253 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
FAM220CP-201ENST00000395253 CYB5RLQ6IPT4 315 aa31.76■■■□□ 2.67
FAM220CP-201ENST00000395253 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
FAM220CP-201ENST00000395253 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
FAM220CP-201ENST00000395253 TRHP20396 242 aaPredicted RBP31.65■■■□□ 2.66
FAM220CP-201ENST00000395253 ARAP1Q96P48 1450 aa31.64■■■□□ 2.66
FAM220CP-201ENST00000395253 CHD1O14646 1710 aa31.61■■■□□ 2.65
FAM220CP-201ENST00000395253 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
FAM220CP-201ENST00000395253 TARBP1Q13395 1621 aaKnown RBP31.55■■■□□ 2.64
FAM220CP-201ENST00000395253 FBLN2P98095 1184 aa31.51■■■□□ 2.63
FAM220CP-201ENST00000395253 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
FAM220CP-201ENST00000395253 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
FAM220CP-201ENST00000395253 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
FAM220CP-201ENST00000395253 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 SOGA1O94964 1423 aa31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
FAM220CP-201ENST00000395253 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
FAM220CP-201ENST00000395253 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
FAM220CP-201ENST00000395253 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
FAM220CP-201ENST00000395253 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
FAM220CP-201ENST00000395253 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.58
FAM220CP-201ENST00000395253 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
FAM220CP-201ENST00000395253 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
FAM220CP-201ENST00000395253 GAPVD1Q14C86 1478 aa31.01■■■□□ 2.56
FAM220CP-201ENST00000395253 CUX1P39880 1505 aa30.98■■■□□ 2.55
FAM220CP-201ENST00000395253 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
FAM220CP-201ENST00000395253 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
FAM220CP-201ENST00000395253 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
FAM220CP-201ENST00000395253 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
FAM220CP-201ENST00000395253 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
FAM220CP-201ENST00000395253 NUP160Q12769 1436 aa30.64■■■□□ 2.5
FAM220CP-201ENST00000395253 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
FAM220CP-201ENST00000395253 ADAMTS12P58397 1594 aa30.61■■■□□ 2.49
FAM220CP-201ENST00000395253 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
FAM220CP-201ENST00000395253 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
FAM220CP-201ENST00000395253 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
FAM220CP-201ENST00000395253 KIF13AQ9H1H9 1805 aa30.45■■■□□ 2.46
FAM220CP-201ENST00000395253 ERICH3Q5RHP9 1530 aa30.41■■■□□ 2.46
FAM220CP-201ENST00000395253 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
FAM220CP-201ENST00000395253 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
FAM220CP-201ENST00000395253 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
FAM220CP-201ENST00000395253 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms