RNA–Protein interactions for RNA: ENST00000395253.3

FAM220CP-201, Transcript of family with sequence similarity 220 member C, pseudogene, humanhuman

BASIC

Gene FAM220CP, Length 831 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220CP-201ENST00000395253 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
FAM220CP-201ENST00000395253 ABCC9O60706 1549 aa39.3■■■■□ 3.88
FAM220CP-201ENST00000395253 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
FAM220CP-201ENST00000395253 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
FAM220CP-201ENST00000395253 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
FAM220CP-201ENST00000395253 NACADO15069 1562 aa36.8■■■■□ 3.48
FAM220CP-201ENST00000395253 PABPN1Q86U42 306 aaKnown RBP eCLIP36.43■■■■□ 3.42
FAM220CP-201ENST00000395253 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
FAM220CP-201ENST00000395253 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.39
FAM220CP-201ENST00000395253 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
FAM220CP-201ENST00000395253 BICRAQ9NZM4 1560 aa36.05■■■■□ 3.36
FAM220CP-201ENST00000395253 SHROOM4Q9ULL8 1493 aa35.71■■■■□ 3.31
FAM220CP-201ENST00000395253 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
FAM220CP-201ENST00000395253 CC2D2AQ9P2K1 1620 aa35.48■■■■□ 3.27
FAM220CP-201ENST00000395253 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
FAM220CP-201ENST00000395253 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
FAM220CP-201ENST00000395253 EIF4G1Q04637 1599 aaKnown RBP35.28■■■■□ 3.24
FAM220CP-201ENST00000395253 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
FAM220CP-201ENST00000395253 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
FAM220CP-201ENST00000395253 CUX2O14529 1486 aa34.27■■■■□ 3.08
FAM220CP-201ENST00000395253 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
FAM220CP-201ENST00000395253 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
FAM220CP-201ENST00000395253 ATAD2BQ9ULI0 1458 aa33.74■■■□□ 2.99
FAM220CP-201ENST00000395253 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
FAM220CP-201ENST00000395253 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
FAM220CP-201ENST00000395253 NESP48681 1621 aa33.53■■■□□ 2.96
FAM220CP-201ENST00000395253 SMARCA4P51532 1647 aa33.52■■■□□ 2.96
FAM220CP-201ENST00000395253 THOC2Q8NI27 1593 aaKnown RBP33.4■■■□□ 2.94
FAM220CP-201ENST00000395253 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
FAM220CP-201ENST00000395253 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
FAM220CP-201ENST00000395253 LAMC3Q9Y6N6 1575 aa33.31■■■□□ 2.92
FAM220CP-201ENST00000395253 PEG3Q9GZU2 1588 aa33.25■■■□□ 2.91
FAM220CP-201ENST00000395253 PDS5BQ9NTI5 1447 aa33.17■■■□□ 2.9
FAM220CP-201ENST00000395253 KIF21AQ7Z4S6 1674 aa33.09■■■□□ 2.89
FAM220CP-201ENST00000395253 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
FAM220CP-201ENST00000395253 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
FAM220CP-201ENST00000395253 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
FAM220CP-201ENST00000395253 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
FAM220CP-201ENST00000395253 WDR62O43379 1518 aa32.83■■■□□ 2.85
FAM220CP-201ENST00000395253 CEP164Q9UPV0 1460 aa32.64■■■□□ 2.82
FAM220CP-201ENST00000395253 OSCARQ8IYS5 282 aa32.53■■■□□ 2.8
FAM220CP-201ENST00000395253 FANCD2Q9BXW9 1451 aa32.51■■■□□ 2.79
FAM220CP-201ENST00000395253 WIZO95785 1651 aa32.45■■■□□ 2.79
FAM220CP-201ENST00000395253 CFTRP13569 1480 aa32.38■■■□□ 2.77
FAM220CP-201ENST00000395253 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
FAM220CP-201ENST00000395253 URB2Q14146 1524 aaKnown RBP32.25■■■□□ 2.75
FAM220CP-201ENST00000395253 RIMBP3CA6NJZ7 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 RIMBP3BA6NNM3 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 RIMBP3Q9UFD9 1639 aa32.14■■■□□ 2.74
FAM220CP-201ENST00000395253 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
FAM220CP-201ENST00000395253 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
FAM220CP-201ENST00000395253 ARHGEF11O15085 1522 aa32.01■■■□□ 2.72
FAM220CP-201ENST00000395253 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
FAM220CP-201ENST00000395253 ZNF608Q9ULD9 1512 aaPredicted RBP31.94■■■□□ 2.7
FAM220CP-201ENST00000395253 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
FAM220CP-201ENST00000395253 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
FAM220CP-201ENST00000395253 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
FAM220CP-201ENST00000395253 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
FAM220CP-201ENST00000395253 CYB5RLQ6IPT4 315 aa31.76■■■□□ 2.67
FAM220CP-201ENST00000395253 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
FAM220CP-201ENST00000395253 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
FAM220CP-201ENST00000395253 TRHP20396 242 aaPredicted RBP31.65■■■□□ 2.66
FAM220CP-201ENST00000395253 ARAP1Q96P48 1450 aa31.64■■■□□ 2.66
FAM220CP-201ENST00000395253 CHD1O14646 1710 aa31.61■■■□□ 2.65
FAM220CP-201ENST00000395253 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
FAM220CP-201ENST00000395253 TARBP1Q13395 1621 aaKnown RBP31.55■■■□□ 2.64
FAM220CP-201ENST00000395253 FBLN2P98095 1184 aa31.51■■■□□ 2.63
FAM220CP-201ENST00000395253 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
FAM220CP-201ENST00000395253 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
FAM220CP-201ENST00000395253 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
FAM220CP-201ENST00000395253 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 SOGA1O94964 1423 aa31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
FAM220CP-201ENST00000395253 SNAPC4Q5SXM2 1469 aa31.27■■■□□ 2.6
FAM220CP-201ENST00000395253 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
FAM220CP-201ENST00000395253 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
FAM220CP-201ENST00000395253 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
FAM220CP-201ENST00000395253 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
FAM220CP-201ENST00000395253 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.58
FAM220CP-201ENST00000395253 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
FAM220CP-201ENST00000395253 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
FAM220CP-201ENST00000395253 GAPVD1Q14C86 1478 aa31.01■■■□□ 2.56
FAM220CP-201ENST00000395253 CUX1P39880 1505 aa30.98■■■□□ 2.55
FAM220CP-201ENST00000395253 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
FAM220CP-201ENST00000395253 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
FAM220CP-201ENST00000395253 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
FAM220CP-201ENST00000395253 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
FAM220CP-201ENST00000395253 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
FAM220CP-201ENST00000395253 NUP160Q12769 1436 aa30.64■■■□□ 2.5
FAM220CP-201ENST00000395253 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
FAM220CP-201ENST00000395253 ADAMTS12P58397 1594 aa30.61■■■□□ 2.49
FAM220CP-201ENST00000395253 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
FAM220CP-201ENST00000395253 WRNQ14191 1432 aaPredicted RBP eCLIP30.55■■■□□ 2.48
FAM220CP-201ENST00000395253 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
FAM220CP-201ENST00000395253 KIF13AQ9H1H9 1805 aa30.45■■■□□ 2.46
FAM220CP-201ENST00000395253 ERICH3Q5RHP9 1530 aa30.41■■■□□ 2.46
FAM220CP-201ENST00000395253 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
FAM220CP-201ENST00000395253 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
FAM220CP-201ENST00000395253 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
FAM220CP-201ENST00000395253 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms