RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TSPY10P0CW01 314 aa30.49■■■□□ 2.47
COL11A2-204ENST00000395194 DNMT1P26358 1616 aaKnown RBP30.48■■■□□ 2.47
COL11A2-204ENST00000395194 FBXO31Q5XUX0 539 aaPredicted RBP30.48■■■□□ 2.47
COL11A2-204ENST00000395194 A2ML1A8K2U0 1454 aa30.48■■■□□ 2.47
COL11A2-204ENST00000395194 TCOF1Q13428 1488 aaKnown RBP30.47■■■□□ 2.47
COL11A2-204ENST00000395194 ZNF335Q9H4Z2 1342 aaPredicted RBP30.46■■■□□ 2.47
COL11A2-204ENST00000395194 WASHC2CQ9Y4E1 1318 aa30.46■■■□□ 2.47
COL11A2-204ENST00000395194 MAP3K1Q13233 1512 aa30.45■■■□□ 2.47
COL11A2-204ENST00000395194 PZPP20742 1482 aa30.44■■■□□ 2.46
COL11A2-204ENST00000395194 TNRQ92752 1358 aa30.44■■■□□ 2.46
COL11A2-204ENST00000395194 PKD2Q13563 968 aa30.44■■■□□ 2.46
COL11A2-204ENST00000395194 FAM135AQ9P2D6 1515 aa30.43■■■□□ 2.46
COL11A2-204ENST00000395194 MAST1Q9Y2H9 1570 aa30.43■■■□□ 2.46
COL11A2-204ENST00000395194 MYOM3Q5VTT5 1437 aa30.42■■■□□ 2.46
COL11A2-204ENST00000395194 POLR1AO95602 1720 aaPredicted RBP30.41■■■□□ 2.46
COL11A2-204ENST00000395194 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.46
COL11A2-204ENST00000395194 IQSEC2Q5JU85 1478 aa30.38■■■□□ 2.45
COL11A2-204ENST00000395194 MIA2Q96PC5 1412 aa30.36■■■□□ 2.45
COL11A2-204ENST00000395194 CFAP65Q6ZU64 1925 aaKnown RBP30.35■■■□□ 2.45
COL11A2-204ENST00000395194 EIF2AK4Q9P2K8 1649 aaKnown RBP30.34■■■□□ 2.45
COL11A2-204ENST00000395194 CEP152O94986 1710 aa30.33■■■□□ 2.45
COL11A2-204ENST00000395194 ABCC3O15438 1527 aa30.33■■■□□ 2.45
COL11A2-204ENST00000395194 ZC3H13Q5T200 1668 aaKnown RBP30.33■■■□□ 2.45
COL11A2-204ENST00000395194 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.45
COL11A2-204ENST00000395194 MROH1Q8NDA8 1641 aa30.31■■■□□ 2.44
COL11A2-204ENST00000395194 CROCC2H7BZ55 1655 aa30.3■■■□□ 2.44
COL11A2-204ENST00000395194 PTPN23Q9H3S7 1636 aa30.29■■■□□ 2.44
COL11A2-204ENST00000395194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.28■■■□□ 2.447e-7■■■■■ 52.8
COL11A2-204ENST00000395194 APLP2Q06481 763 aa30.28■■■□□ 2.44
COL11A2-204ENST00000395194 UGGT1Q9NYU2 1555 aa30.28■■■□□ 2.44
COL11A2-204ENST00000395194 NLRP1Q9C000 1473 aa30.26■■■□□ 2.44
COL11A2-204ENST00000395194 DISP3Q9P2K9 1392 aa30.26■■■□□ 2.43
COL11A2-204ENST00000395194 DUOX2Q9NRD8 1548 aa30.25■■■□□ 2.43
COL11A2-204ENST00000395194 UBAP1LF5GYI3 381 aa30.24■■■□□ 2.43
COL11A2-204ENST00000395194 SPATA31D1Q6ZQQ2 1576 aa30.23■■■□□ 2.43
COL11A2-204ENST00000395194 ABCC5O15440 1437 aa30.22■■■□□ 2.43
COL11A2-204ENST00000395194 ERVK-7P63135 1459 aa30.21■■■□□ 2.43
COL11A2-204ENST00000395194 KIF15Q9NS87 1388 aa30.21■■■□□ 2.43
COL11A2-204ENST00000395194 THEMISQ8N1K5 641 aaPredicted RBP30.21■■■□□ 2.43
COL11A2-204ENST00000395194 ANKLE2Q86XL3 938 aa30.2■■■□□ 2.43
COL11A2-204ENST00000395194 SHANK2Q9UPX8 1470 aa30.19■■■□□ 2.42
COL11A2-204ENST00000395194 RRP7BPQ9NSQ0 103 aa30.18■■■□□ 2.42
COL11A2-204ENST00000395194 DAPK1P53355 1430 aa30.16■■■□□ 2.42
COL11A2-204ENST00000395194 FGD6Q6ZV73 1430 aa30.16■■■□□ 2.42
COL11A2-204ENST00000395194 DEPDC5O75140 1603 aa30.15■■■□□ 2.42
COL11A2-204ENST00000395194 NPHP4O75161 1426 aaPredicted RBP30.14■■■□□ 2.42
COL11A2-204ENST00000395194 IQGAP1P46940 1657 aa30.14■■■□□ 2.42
COL11A2-204ENST00000395194 PRDM15P57071 1507 aaPredicted RBP30.14■■■□□ 2.42
COL11A2-204ENST00000395194 ERBINQ96RT1 1412 aa30.13■■■□□ 2.41
COL11A2-204ENST00000395194 VWDEQ8N2E2 1590 aa30.12■■■□□ 2.41
COL11A2-204ENST00000395194 UBR1Q8IWV7 1749 aa30.12■■■□□ 2.41
COL11A2-204ENST00000395194 CPS1P31327 1500 aa30.12■■■□□ 2.41
COL11A2-204ENST00000395194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.11■■■□□ 2.41
COL11A2-204ENST00000395194 ILDR2Q71H61 639 aa30.1■■■□□ 2.41
COL11A2-204ENST00000395194 CHIC2Q9UKJ5 165 aa30.1■■■□□ 2.41
COL11A2-204ENST00000395194 MED14O60244 1454 aa30.1■■■□□ 2.41
COL11A2-204ENST00000395194 SCAF1Q9H7N4 1312 aaKnown RBP30.08■■■□□ 2.41
COL11A2-204ENST00000395194 STRCP1A6NGW2 1772 aa30.05■■■□□ 2.4
COL11A2-204ENST00000395194 PIP4K2BP78356 416 aa30.03■■■□□ 2.4
COL11A2-204ENST00000395194 ARHGAP31Q2M1Z3 1444 aa30.01■■■□□ 2.39
COL11A2-204ENST00000395194 ANKRD30AQ9BXX3 1397 aa30.01■■■□□ 2.39
COL11A2-204ENST00000395194 KANK1Q14678 1352 aa30■■■□□ 2.39
COL11A2-204ENST00000395194 PIK3C2BO00750 1634 aa30■■■□□ 2.39
COL11A2-204ENST00000395194 SCAF11Q99590 1463 aaKnown RBP29.97■■■□□ 2.39
COL11A2-204ENST00000395194 TOM1O60784 492 aa29.96■■■□□ 2.39
COL11A2-204ENST00000395194 FAM50AQ14320 339 aaKnown RBP29.96■■■□□ 2.39
COL11A2-204ENST00000395194 SLIT1O75093 1534 aa29.93■■■□□ 2.38
COL11A2-204ENST00000395194 LTKP29376 864 aa29.93■■■□□ 2.38
COL11A2-204ENST00000395194 HSPA1LP34931 641 aa29.93■■■□□ 2.38
COL11A2-204ENST00000395194 ARHGAP23Q9P227 1491 aa29.93■■■□□ 2.38
COL11A2-204ENST00000395194 TXNDC2Q86VQ3 553 aa29.91■■■□□ 2.38
COL11A2-204ENST00000395194 ALKQ9UM73 1620 aa29.91■■■□□ 2.38
COL11A2-204ENST00000395194 LMTK2Q8IWU2 1503 aa29.91■■■□□ 2.38
COL11A2-204ENST00000395194 ADGRL2O95490 1459 aa29.9■■■□□ 2.38
COL11A2-204ENST00000395194 LRRC7Q96NW7 1537 aa29.9■■■□□ 2.38
COL11A2-204ENST00000395194 SYNMO15061 1565 aa29.9■■■□□ 2.38
COL11A2-204ENST00000395194 STAG3Q9UJ98 1225 aa29.88■■■□□ 2.37
COL11A2-204ENST00000395194 EFCAB6Q5THR3 1501 aa29.87■■■□□ 2.37
COL11A2-204ENST00000395194 SENP3Q9H4L4 574 aaPredicted RBP29.84■■■□□ 2.37
COL11A2-204ENST00000395194 EID1Q9Y6B2 187 aa29.84■■■□□ 2.37
COL11A2-204ENST00000395194 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
COL11A2-204ENST00000395194 SOCS7O14512 581 aa29.83■■■□□ 2.37
COL11A2-204ENST00000395194 IDI1Q13907 227 aa29.82■■■□□ 2.36
COL11A2-204ENST00000395194 KDM5AP29375 1690 aaKnown RBP29.82■■■□□ 2.36
COL11A2-204ENST00000395194 ANKRD50Q9ULJ7 1429 aa29.81■■■□□ 2.36
COL11A2-204ENST00000395194 XIRP1Q702N8 1843 aaKnown RBP29.8■■■□□ 2.36
COL11A2-204ENST00000395194 MED1Q15648 1581 aaPredicted RBP29.79■■■□□ 2.36
COL11A2-204ENST00000395194 NOS1P29475 1434 aa29.79■■■□□ 2.36
COL11A2-204ENST00000395194 ADGRB3O60242 1522 aa29.77■■■□□ 2.36
COL11A2-204ENST00000395194 MYO5BQ9ULV0 1848 aa29.77■■■□□ 2.36
COL11A2-204ENST00000395194 TET3O43151 1660 aa29.74■■■□□ 2.35
COL11A2-204ENST00000395194 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
COL11A2-204ENST00000395194 UNC13BO14795 1591 aa29.7■■■□□ 2.35
COL11A2-204ENST00000395194 SLC26A8Q96RN1 970 aa29.69■■■□□ 2.34
COL11A2-204ENST00000395194 RPRD2Q5VT52 1461 aaKnown RBP29.68■■■□□ 2.34
COL11A2-204ENST00000395194 PPARGC1BQ86YN6 1023 aaKnown RBP29.68■■■□□ 2.34
COL11A2-204ENST00000395194 SLC52A1Q9NWF4 448 aa29.66■■■□□ 2.34
COL11A2-204ENST00000395194 E9PCH4 1651 aa29.64■■■□□ 2.34
COL11A2-204ENST00000395194 ITGAEP38570 1179 aa29.64■■■□□ 2.34
COL11A2-204ENST00000395194 BCANQ96GW7 911 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms