RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TSPY4P0CV99 314 aa27.79■■■□□ 2.04
SNRPA1-202ENST00000394082 TSPY10P0CW01 314 aa27.79■■■□□ 2.04
SNRPA1-202ENST00000394082 KDM5DQ9BY66 1539 aa27.78■■■□□ 2.04
SNRPA1-202ENST00000394082 A2ML1A8K2U0 1454 aa27.77■■■□□ 2.04
SNRPA1-202ENST00000394082 NCKAP5LQ9HCH0 1330 aa27.76■■■□□ 2.03
SNRPA1-202ENST00000394082 PZPP20742 1482 aa27.76■■■□□ 2.03
SNRPA1-202ENST00000394082 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
SNRPA1-202ENST00000394082 MAST1Q9Y2H9 1570 aa27.73■■■□□ 2.03
SNRPA1-202ENST00000394082 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
SNRPA1-202ENST00000394082 MIA2Q96PC5 1412 aa27.73■■■□□ 2.03
SNRPA1-202ENST00000394082 WASHC2CQ9Y4E1 1318 aa27.72■■■□□ 2.03
SNRPA1-202ENST00000394082 TNRQ92752 1358 aa27.71■■■□□ 2.03
SNRPA1-202ENST00000394082 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
SNRPA1-202ENST00000394082 KANK4Q5T7N3 995 aaPredicted RBP27.66■■■□□ 2.02
SNRPA1-202ENST00000394082 FBXO31Q5XUX0 539 aaPredicted RBP27.66■■■□□ 2.02
SNRPA1-202ENST00000394082 RNF17Q9BXT8 1623 aaKnown RBP27.66■■■□□ 2.02
SNRPA1-202ENST00000394082 ZNF335Q9H4Z2 1342 aaPredicted RBP27.66■■■□□ 2.02
SNRPA1-202ENST00000394082 NLRP1Q9C000 1473 aa27.64■■■□□ 2.02
SNRPA1-202ENST00000394082 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
SNRPA1-202ENST00000394082 ZC3H13Q5T200 1668 aaKnown RBP27.62■■■□□ 2.01
SNRPA1-202ENST00000394082 POLR1AO95602 1720 aaPredicted RBP27.59■■■□□ 2.01
SNRPA1-202ENST00000394082 THEMISQ8N1K5 641 aaPredicted RBP27.59■■■□□ 2.01
SNRPA1-202ENST00000394082 ABCC3O15438 1527 aa27.57■■■□□ 2
SNRPA1-202ENST00000394082 NEURL4Q96JN8 1562 aa27.57■■■□□ 2
SNRPA1-202ENST00000394082 ANKLE2Q86XL3 938 aa27.55■■■□□ 2
SNRPA1-202ENST00000394082 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
SNRPA1-202ENST00000394082 SPATA31D1Q6ZQQ2 1576 aa27.55■■■□□ 2
SNRPA1-202ENST00000394082 UGGT1Q9NYU2 1555 aa27.55■■■□□ 2
SNRPA1-202ENST00000394082 MED14O60244 1454 aa27.53■■■□□ 2
SNRPA1-202ENST00000394082 SHANK2Q9UPX8 1470 aa27.53■■■□□ 2
SNRPA1-202ENST00000394082 DEPDC5O75140 1603 aa27.52■■■□□ 2
SNRPA1-202ENST00000394082 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
SNRPA1-202ENST00000394082 CPS1P31327 1500 aa27.51■■■□□ 2
SNRPA1-202ENST00000394082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■□□□ 1.99
SNRPA1-202ENST00000394082 DISP3Q9P2K9 1392 aa27.49■■□□□ 1.99
SNRPA1-202ENST00000394082 UBAP1LF5GYI3 381 aa27.49■■□□□ 1.99
SNRPA1-202ENST00000394082 APLP2Q06481 763 aa27.49■■□□□ 1.99
SNRPA1-202ENST00000394082 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
SNRPA1-202ENST00000394082 ABCC5O15440 1437 aa27.47■■□□□ 1.99
SNRPA1-202ENST00000394082 ERBINQ96RT1 1412 aa27.47■■□□□ 1.99
SNRPA1-202ENST00000394082 KIF15Q9NS87 1388 aa27.46■■□□□ 1.99
SNRPA1-202ENST00000394082 CROCC2H7BZ55 1655 aa27.46■■□□□ 1.99
SNRPA1-202ENST00000394082 PTPN23Q9H3S7 1636 aa27.45■■□□□ 1.99
SNRPA1-202ENST00000394082 ARHGAP31Q2M1Z3 1444 aa27.45■■□□□ 1.98
SNRPA1-202ENST00000394082 NPHP4O75161 1426 aaPredicted RBP27.44■■□□□ 1.98
SNRPA1-202ENST00000394082 PRDM15P57071 1507 aaPredicted RBP27.44■■□□□ 1.98
SNRPA1-202ENST00000394082 VWDEQ8N2E2 1590 aa27.42■■□□□ 1.98
SNRPA1-202ENST00000394082 CEP152O94986 1710 aa27.41■■□□□ 1.98
SNRPA1-202ENST00000394082 DAPK1P53355 1430 aa27.41■■□□□ 1.98
SNRPA1-202ENST00000394082 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
SNRPA1-202ENST00000394082 IQGAP1P46940 1657 aa27.38■■□□□ 1.97
SNRPA1-202ENST00000394082 TOM1O60784 492 aa27.36■■□□□ 1.97
SNRPA1-202ENST00000394082 RRP7BPQ9NSQ0 103 aa27.36■■□□□ 1.97
SNRPA1-202ENST00000394082 UBR1Q8IWV7 1749 aa27.36■■□□□ 1.97
SNRPA1-202ENST00000394082 ILDR2Q71H61 639 aa27.34■■□□□ 1.97
SNRPA1-202ENST00000394082 ANKRD30AQ9BXX3 1397 aa27.33■■□□□ 1.97
SNRPA1-202ENST00000394082 ARHGAP23Q9P227 1491 aa27.32■■□□□ 1.96
SNRPA1-202ENST00000394082 SLIT1O75093 1534 aa27.31■■□□□ 1.96
SNRPA1-202ENST00000394082 KANK1Q14678 1352 aa27.31■■□□□ 1.96
SNRPA1-202ENST00000394082 LMTK2Q8IWU2 1503 aa27.31■■□□□ 1.96
SNRPA1-202ENST00000394082 SCAF11Q99590 1463 aaKnown RBP27.29■■□□□ 1.96
SNRPA1-202ENST00000394082 CFAP65Q6ZU64 1925 aaKnown RBP27.29■■□□□ 1.96
SNRPA1-202ENST00000394082 SOCS7O14512 581 aa27.27■■□□□ 1.96
SNRPA1-202ENST00000394082 ADGRL2O95490 1459 aa27.25■■□□□ 1.95
SNRPA1-202ENST00000394082 KDM5AP29375 1690 aaKnown RBP27.25■■□□□ 1.95
SNRPA1-202ENST00000394082 SYNMO15061 1565 aa27.25■■□□□ 1.95
SNRPA1-202ENST00000394082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.24■■□□□ 1.952e-7■□□□□ 8
SNRPA1-202ENST00000394082 LRRC7Q96NW7 1537 aa27.23■■□□□ 1.95
SNRPA1-202ENST00000394082 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
SNRPA1-202ENST00000394082 LTKP29376 864 aa27.22■■□□□ 1.95
SNRPA1-202ENST00000394082 TXNDC2Q86VQ3 553 aa27.22■■□□□ 1.95
SNRPA1-202ENST00000394082 PIP4K2BP78356 416 aa27.21■■□□□ 1.95
SNRPA1-202ENST00000394082 EID1Q9Y6B2 187 aa27.21■■□□□ 1.95
SNRPA1-202ENST00000394082 ALKQ9UM73 1620 aa27.2■■□□□ 1.95
SNRPA1-202ENST00000394082 HSPA1LP34931 641 aa27.2■■□□□ 1.94
SNRPA1-202ENST00000394082 CHIC2Q9UKJ5 165 aa27.2■■□□□ 1.94
SNRPA1-202ENST00000394082 TMEM2Q9UHN6 1383 aa27.2■■□□□ 1.94
SNRPA1-202ENST00000394082 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
SNRPA1-202ENST00000394082 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
SNRPA1-202ENST00000394082 NOS1P29475 1434 aa27.16■■□□□ 1.94
SNRPA1-202ENST00000394082 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
SNRPA1-202ENST00000394082 IDI1Q13907 227 aa27.15■■□□□ 1.94
SNRPA1-202ENST00000394082 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
SNRPA1-202ENST00000394082 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
SNRPA1-202ENST00000394082 SLC52A1Q9NWF4 448 aa27.12■■□□□ 1.93
SNRPA1-202ENST00000394082 ANKRD50Q9ULJ7 1429 aa27.12■■□□□ 1.93
SNRPA1-202ENST00000394082 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
SNRPA1-202ENST00000394082 MED1Q15648 1581 aaPredicted RBP27.07■■□□□ 1.92
SNRPA1-202ENST00000394082 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
SNRPA1-202ENST00000394082 TET3O43151 1660 aa27.05■■□□□ 1.92
SNRPA1-202ENST00000394082 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
SNRPA1-202ENST00000394082 ROCK1Q13464 1354 aa27.01■■□□□ 1.91
SNRPA1-202ENST00000394082 KCNA6P17658 529 aa27.01■■□□□ 1.91
SNRPA1-202ENST00000394082 UNC13BO14795 1591 aa26.99■■□□□ 1.91
SNRPA1-202ENST00000394082 GCC2Q8IWJ2 1684 aa26.96■■□□□ 1.91
SNRPA1-202ENST00000394082 ZFYVE9O95405 1425 aa26.95■■□□□ 1.9
SNRPA1-202ENST00000394082 FAM135BQ49AJ0 1406 aa26.95■■□□□ 1.9
SNRPA1-202ENST00000394082 NKTRP30414 1462 aaKnown RBP26.94■■□□□ 1.9
SNRPA1-202ENST00000394082 HDGFP51858 240 aaKnown RBP26.94■■□□□ 1.9
SNRPA1-202ENST00000394082 TMEM94Q12767 1356 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms