RNA–Protein interactions for RNA: ENST00000389825.7

GREB1-205, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-205ENST00000389825 KIAA1107Q9UPP5 1409 aa23.75■■□□□ 1.39
GREB1-205ENST00000389825 MYO3AQ8NEV4 1616 aa23.74■■□□□ 1.39
GREB1-205ENST00000389825 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
GREB1-205ENST00000389825 CEP170BQ9Y4F5 1589 aaPredicted RBP23.73■■□□□ 1.39
GREB1-205ENST00000389825 TOM1O60784 492 aa23.72■■□□□ 1.39
GREB1-205ENST00000389825 ITGAEP38570 1179 aa23.72■■□□□ 1.39
GREB1-205ENST00000389825 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
GREB1-205ENST00000389825 ARHGEF5Q12774 1597 aa23.7■■□□□ 1.38
GREB1-205ENST00000389825 DNMT1P26358 1616 aaKnown RBP23.69■■□□□ 1.38
GREB1-205ENST00000389825 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.384e-6■■■□□ 15.7
GREB1-205ENST00000389825 PIP4K2BP78356 416 aa23.69■■□□□ 1.38
GREB1-205ENST00000389825 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
GREB1-205ENST00000389825 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
GREB1-205ENST00000389825 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
GREB1-205ENST00000389825 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
GREB1-205ENST00000389825 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
GREB1-205ENST00000389825 DAPK1P53355 1430 aa23.67■■□□□ 1.38
GREB1-205ENST00000389825 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
GREB1-205ENST00000389825 CPS1P31327 1500 aa23.66■■□□□ 1.38
GREB1-205ENST00000389825 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
GREB1-205ENST00000389825 MBD5Q9P267 1494 aa23.65■■□□□ 1.38
GREB1-205ENST00000389825 ABCC5O15440 1437 aa23.63■■□□□ 1.37
GREB1-205ENST00000389825 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
GREB1-205ENST00000389825 SPAG9O60271 1321 aaKnown RBP23.6■■□□□ 1.37
GREB1-205ENST00000389825 SHANK2Q9UPX8 1470 aa23.6■■□□□ 1.37
GREB1-205ENST00000389825 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
GREB1-205ENST00000389825 PLXNC1O60486 1568 aa23.58■■□□□ 1.37
GREB1-205ENST00000389825 POLR1AO95602 1720 aaPredicted RBP23.58■■□□□ 1.36
GREB1-205ENST00000389825 CHIC2Q9UKJ5 165 aa23.58■■□□□ 1.36
GREB1-205ENST00000389825 ADGBQ8N7X0 1667 aa23.56■■□□□ 1.36
GREB1-205ENST00000389825 MAST1Q9Y2H9 1570 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 A2MP01023 1474 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 GGT6Q6P531 493 aa23.55■■□□□ 1.36
GREB1-205ENST00000389825 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
GREB1-205ENST00000389825 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
GREB1-205ENST00000389825 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
GREB1-205ENST00000389825 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
GREB1-205ENST00000389825 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
GREB1-205ENST00000389825 HFM1A2PYH4 1435 aa23.48■■□□□ 1.35
GREB1-205ENST00000389825 VWDEQ8N2E2 1590 aa23.47■■□□□ 1.35
GREB1-205ENST00000389825 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
GREB1-205ENST00000389825 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
GREB1-205ENST00000389825 ANKLE2Q86XL3 938 aa23.45■■□□□ 1.34
GREB1-205ENST00000389825 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
GREB1-205ENST00000389825 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
GREB1-205ENST00000389825 NAIPQ13075 1403 aa23.43■■□□□ 1.34
GREB1-205ENST00000389825 TNRQ92752 1358 aa23.42■■□□□ 1.34
GREB1-205ENST00000389825 KIF15Q9NS87 1388 aa23.42■■□□□ 1.34
GREB1-205ENST00000389825 MED14O60244 1454 aa23.41■■□□□ 1.34
GREB1-205ENST00000389825 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
GREB1-205ENST00000389825 HRCP23327 699 aa23.39■■□□□ 1.34
GREB1-205ENST00000389825 RGS17Q9UGC6 210 aaPredicted RBP23.39■■□□□ 1.34
GREB1-205ENST00000389825 DEPDC5O75140 1603 aa23.39■■□□□ 1.33
GREB1-205ENST00000389825 DUOX2Q9NRD8 1548 aa23.38■■□□□ 1.33
GREB1-205ENST00000389825 NPHP4O75161 1426 aaPredicted RBP23.38■■□□□ 1.33
GREB1-205ENST00000389825 FBXO31Q5XUX0 539 aaPredicted RBP23.37■■□□□ 1.33
GREB1-205ENST00000389825 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
GREB1-205ENST00000389825 PZPP20742 1482 aa23.36■■□□□ 1.33
GREB1-205ENST00000389825 ANKRD50Q9ULJ7 1429 aa23.35■■□□□ 1.33
GREB1-205ENST00000389825 RNF17Q9BXT8 1623 aaKnown RBP23.34■■□□□ 1.33
GREB1-205ENST00000389825 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
GREB1-205ENST00000389825 NLRP1Q9C000 1473 aa23.33■■□□□ 1.33
GREB1-205ENST00000389825 FAM135AQ9P2D6 1515 aa23.33■■□□□ 1.33
GREB1-205ENST00000389825 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.32
GREB1-205ENST00000389825 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
GREB1-205ENST00000389825 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
GREB1-205ENST00000389825 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
GREB1-205ENST00000389825 DHX29Q7Z478 1369 aaKnown RBP23.32■■□□□ 1.32
GREB1-205ENST00000389825 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
GREB1-205ENST00000389825 SYNMO15061 1565 aa23.31■■□□□ 1.32
GREB1-205ENST00000389825 KDM5DQ9BY66 1539 aa23.3■■□□□ 1.32
GREB1-205ENST00000389825 KIF3BO15066 747 aa23.26■■□□□ 1.31
GREB1-205ENST00000389825 EIF2AK4Q9P2K8 1649 aaKnown RBP23.25■■□□□ 1.31
GREB1-205ENST00000389825 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
GREB1-205ENST00000389825 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
GREB1-205ENST00000389825 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
GREB1-205ENST00000389825 ZC3H13Q5T200 1668 aaKnown RBP23.18■■□□□ 1.3
GREB1-205ENST00000389825 KANK1Q14678 1352 aa23.16■■□□□ 1.3
GREB1-205ENST00000389825 UNC13BO14795 1591 aa23.16■■□□□ 1.3
GREB1-205ENST00000389825 NUP155O75694 1391 aa23.15■■□□□ 1.3
GREB1-205ENST00000389825 FAM135BQ49AJ0 1406 aa23.15■■□□□ 1.3
GREB1-205ENST00000389825 XIRP1Q702N8 1843 aaKnown RBP23.15■■□□□ 1.3
GREB1-205ENST00000389825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.292e-13■□□□□ 9.5
GREB1-205ENST00000389825 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
GREB1-205ENST00000389825 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
GREB1-205ENST00000389825 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
GREB1-205ENST00000389825 DHX57Q6P158 1386 aaKnown RBP23.09■■□□□ 1.29
GREB1-205ENST00000389825 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
GREB1-205ENST00000389825 PRDM15P57071 1507 aaPredicted RBP23.07■■□□□ 1.28
GREB1-205ENST00000389825 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
GREB1-205ENST00000389825 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
GREB1-205ENST00000389825 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
GREB1-205ENST00000389825 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
GREB1-205ENST00000389825 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
GREB1-205ENST00000389825 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
GREB1-205ENST00000389825 ABCC3O15438 1527 aa23.03■■□□□ 1.28
GREB1-205ENST00000389825 LTKP29376 864 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms