RNA–Protein interactions for RNA: ENST00000389825.7

GREB1-205, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-205ENST00000389825 NISCHQ9Y2I1 1504 aa36.65■■■■□ 3.46
GREB1-205ENST00000389825 ABCC9O60706 1549 aa34■■■■□ 3.03
GREB1-205ENST00000389825 CCDC180Q9P1Z9 1646 aa33.27■■■□□ 2.92
GREB1-205ENST00000389825 DNAJC5BQ9UF47 199 aa32.64■■■□□ 2.82
GREB1-205ENST00000389825 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
GREB1-205ENST00000389825 NACADO15069 1562 aa31.66■■■□□ 2.66
GREB1-205ENST00000389825 PABPN1Q86U42 306 aaKnown RBP eCLIP31.51■■■□□ 2.64
GREB1-205ENST00000389825 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
GREB1-205ENST00000389825 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
GREB1-205ENST00000389825 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.57
GREB1-205ENST00000389825 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
GREB1-205ENST00000389825 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
GREB1-205ENST00000389825 CC2D2AQ9P2K1 1620 aa30.71■■■□□ 2.51
GREB1-205ENST00000389825 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
GREB1-205ENST00000389825 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
GREB1-205ENST00000389825 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
GREB1-205ENST00000389825 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
GREB1-205ENST00000389825 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
GREB1-205ENST00000389825 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
GREB1-205ENST00000389825 CUX2O14529 1486 aa29.7■■■□□ 2.35
GREB1-205ENST00000389825 ERCC6Q03468 1493 aa29.43■■■□□ 2.3
GREB1-205ENST00000389825 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
GREB1-205ENST00000389825 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
GREB1-205ENST00000389825 NESP48681 1621 aa28.96■■■□□ 2.23
GREB1-205ENST00000389825 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
GREB1-205ENST00000389825 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
GREB1-205ENST00000389825 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
GREB1-205ENST00000389825 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
GREB1-205ENST00000389825 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
GREB1-205ENST00000389825 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
GREB1-205ENST00000389825 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
GREB1-205ENST00000389825 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
GREB1-205ENST00000389825 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
GREB1-205ENST00000389825 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
GREB1-205ENST00000389825 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
GREB1-205ENST00000389825 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
GREB1-205ENST00000389825 WDR62O43379 1518 aa28.3■■■□□ 2.12
GREB1-205ENST00000389825 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
GREB1-205ENST00000389825 OSCARQ8IYS5 282 aa28.22■■■□□ 2.11
GREB1-205ENST00000389825 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.1
GREB1-205ENST00000389825 RSF1Q96T23 1441 aaPredicted RBP28.15■■■□□ 2.1
GREB1-205ENST00000389825 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
GREB1-205ENST00000389825 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
GREB1-205ENST00000389825 WIZO95785 1651 aa27.97■■■□□ 2.07
GREB1-205ENST00000389825 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
GREB1-205ENST00000389825 RIMBP3CA6NJZ7 1639 aa27.9■■■□□ 2.06
GREB1-205ENST00000389825 RIMBP3BA6NNM3 1639 aa27.9■■■□□ 2.06
GREB1-205ENST00000389825 RIMBP3Q9UFD9 1639 aa27.9■■■□□ 2.06
GREB1-205ENST00000389825 CFTRP13569 1480 aa27.8■■■□□ 2.04
GREB1-205ENST00000389825 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
GREB1-205ENST00000389825 ARHGEF11O15085 1522 aa27.73■■■□□ 2.03
GREB1-205ENST00000389825 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
GREB1-205ENST00000389825 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
GREB1-205ENST00000389825 IFT140Q96RY7 1462 aa27.54■■■□□ 2
GREB1-205ENST00000389825 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
GREB1-205ENST00000389825 TRHP20396 242 aaPredicted RBP27.53■■■□□ 2
GREB1-205ENST00000389825 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
GREB1-205ENST00000389825 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
GREB1-205ENST00000389825 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
GREB1-205ENST00000389825 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
GREB1-205ENST00000389825 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
GREB1-205ENST00000389825 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
GREB1-205ENST00000389825 CHD1O14646 1710 aa27.32■■□□□ 1.96
GREB1-205ENST00000389825 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
GREB1-205ENST00000389825 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.943e-7■■■■□ 26.2
GREB1-205ENST00000389825 FBLN2P98095 1184 aa27.17■■□□□ 1.94
GREB1-205ENST00000389825 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
GREB1-205ENST00000389825 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
GREB1-205ENST00000389825 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
GREB1-205ENST00000389825 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
GREB1-205ENST00000389825 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
GREB1-205ENST00000389825 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
GREB1-205ENST00000389825 SNAPC4Q5SXM2 1469 aa26.88■■□□□ 1.89
GREB1-205ENST00000389825 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
GREB1-205ENST00000389825 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
GREB1-205ENST00000389825 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
GREB1-205ENST00000389825 SOGA1O94964 1423 aa26.87■■□□□ 1.89
GREB1-205ENST00000389825 MAGI1Q96QZ7 1491 aaPredicted RBP26.83■■□□□ 1.88
GREB1-205ENST00000389825 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
GREB1-205ENST00000389825 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
GREB1-205ENST00000389825 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
GREB1-205ENST00000389825 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
GREB1-205ENST00000389825 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
GREB1-205ENST00000389825 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
GREB1-205ENST00000389825 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
GREB1-205ENST00000389825 CUX1P39880 1505 aa26.53■■□□□ 1.84
GREB1-205ENST00000389825 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
GREB1-205ENST00000389825 KIF13AQ9H1H9 1805 aa26.44■■□□□ 1.82
GREB1-205ENST00000389825 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
GREB1-205ENST00000389825 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
GREB1-205ENST00000389825 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
GREB1-205ENST00000389825 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
GREB1-205ENST00000389825 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
GREB1-205ENST00000389825 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
GREB1-205ENST00000389825 NUP160Q12769 1436 aa26.34■■□□□ 1.81
GREB1-205ENST00000389825 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
GREB1-205ENST00000389825 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
GREB1-205ENST00000389825 ILDR1Q86SU0 546 aaPredicted RBP26.24■■□□□ 1.79
GREB1-205ENST00000389825 ABCC10Q5T3U5 1492 aa26.18■■□□□ 1.78
GREB1-205ENST00000389825 KDM4FA0A1W2PPD8 638 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms