RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 PKD2Q13563 968 aa29.7■■■□□ 2.35
TMEM41A-202ENST00000382227 FAM135AQ9P2D6 1515 aa29.7■■■□□ 2.34
TMEM41A-202ENST00000382227 KANK4Q5T7N3 995 aaPredicted RBP29.69■■■□□ 2.34
TMEM41A-202ENST00000382227 KDM5DQ9BY66 1539 aa29.69■■■□□ 2.34
TMEM41A-202ENST00000382227 TCOF1Q13428 1488 aaKnown RBP29.68■■■□□ 2.34
TMEM41A-202ENST00000382227 WASHC2CQ9Y4E1 1318 aa29.67■■■□□ 2.34
TMEM41A-202ENST00000382227 A2ML1A8K2U0 1454 aa29.67■■■□□ 2.34
TMEM41A-202ENST00000382227 IQSEC2Q5JU85 1478 aa29.65■■■□□ 2.34
TMEM41A-202ENST00000382227 PZPP20742 1482 aa29.64■■■□□ 2.34
TMEM41A-202ENST00000382227 FBXO31Q5XUX0 539 aaPredicted RBP29.64■■■□□ 2.34
TMEM41A-202ENST00000382227 TNRQ92752 1358 aa29.63■■■□□ 2.33
TMEM41A-202ENST00000382227 MYOM3Q5VTT5 1437 aa29.62■■■□□ 2.33
TMEM41A-202ENST00000382227 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
TMEM41A-202ENST00000382227 DNMT1P26358 1616 aaKnown RBP29.61■■■□□ 2.33
TMEM41A-202ENST00000382227 ZNF335Q9H4Z2 1342 aaPredicted RBP29.61■■■□□ 2.33
TMEM41A-202ENST00000382227 MAST1Q9Y2H9 1570 aa29.6■■■□□ 2.33
TMEM41A-202ENST00000382227 RNF17Q9BXT8 1623 aaKnown RBP29.54■■■□□ 2.32
TMEM41A-202ENST00000382227 EIF2AK4Q9P2K8 1649 aaKnown RBP29.5■■■□□ 2.31
TMEM41A-202ENST00000382227 NLRP1Q9C000 1473 aa29.49■■■□□ 2.31
TMEM41A-202ENST00000382227 ABCC3O15438 1527 aa29.49■■■□□ 2.31
TMEM41A-202ENST00000382227 APLP2Q06481 763 aa29.48■■■□□ 2.31
TMEM41A-202ENST00000382227 ZC3H13Q5T200 1668 aaKnown RBP29.47■■■□□ 2.31
TMEM41A-202ENST00000382227 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
TMEM41A-202ENST00000382227 POLR1AO95602 1720 aaPredicted RBP29.45■■■□□ 2.31
TMEM41A-202ENST00000382227 NEURL4Q96JN8 1562 aa29.45■■■□□ 2.31
TMEM41A-202ENST00000382227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.45■■■□□ 2.31
TMEM41A-202ENST00000382227 UGGT1Q9NYU2 1555 aa29.44■■■□□ 2.3
TMEM41A-202ENST00000382227 ANKLE2Q86XL3 938 aa29.44■■■□□ 2.3
TMEM41A-202ENST00000382227 DUOX2Q9NRD8 1548 aa29.44■■■□□ 2.3
TMEM41A-202ENST00000382227 MROH1Q8NDA8 1641 aa29.43■■■□□ 2.3
TMEM41A-202ENST00000382227 UBAP1LF5GYI3 381 aa29.42■■■□□ 2.3
TMEM41A-202ENST00000382227 SPATA31D1Q6ZQQ2 1576 aa29.41■■■□□ 2.3
TMEM41A-202ENST00000382227 SHANK2Q9UPX8 1470 aa29.41■■■□□ 2.3
TMEM41A-202ENST00000382227 ABCC5O15440 1437 aa29.4■■■□□ 2.3
TMEM41A-202ENST00000382227 DISP3Q9P2K9 1392 aa29.39■■■□□ 2.3
TMEM41A-202ENST00000382227 PTPN23Q9H3S7 1636 aa29.39■■■□□ 2.3
TMEM41A-202ENST00000382227 KIF15Q9NS87 1388 aa29.39■■■□□ 2.29
TMEM41A-202ENST00000382227 ERVK-7P63135 1459 aa29.38■■■□□ 2.29
TMEM41A-202ENST00000382227 CROCC2H7BZ55 1655 aa29.37■■■□□ 2.29
TMEM41A-202ENST00000382227 RRP7BPQ9NSQ0 103 aa29.35■■■□□ 2.29
TMEM41A-202ENST00000382227 ERBINQ96RT1 1412 aa29.35■■■□□ 2.29
TMEM41A-202ENST00000382227 MED14O60244 1454 aa29.35■■■□□ 2.29
TMEM41A-202ENST00000382227 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 CEP152O94986 1710 aa29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 NPHP4O75161 1426 aaPredicted RBP29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 DAPK1P53355 1430 aa29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 FGD6Q6ZV73 1430 aa29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 CPS1P31327 1500 aa29.34■■■□□ 2.29
TMEM41A-202ENST00000382227 PRDM15P57071 1507 aaPredicted RBP29.31■■■□□ 2.28
TMEM41A-202ENST00000382227 VWDEQ8N2E2 1590 aa29.29■■■□□ 2.28
TMEM41A-202ENST00000382227 ARHGAP31Q2M1Z3 1444 aa29.28■■■□□ 2.28
TMEM41A-202ENST00000382227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.25■■■□□ 2.27
TMEM41A-202ENST00000382227 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
TMEM41A-202ENST00000382227 ANKRD30AQ9BXX3 1397 aa29.24■■■□□ 2.27
TMEM41A-202ENST00000382227 ILDR2Q71H61 639 aa29.23■■■□□ 2.27
TMEM41A-202ENST00000382227 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
TMEM41A-202ENST00000382227 CHIC2Q9UKJ5 165 aa29.22■■■□□ 2.27
TMEM41A-202ENST00000382227 KANK1Q14678 1352 aa29.22■■■□□ 2.27
TMEM41A-202ENST00000382227 UBR1Q8IWV7 1749 aa29.22■■■□□ 2.27
TMEM41A-202ENST00000382227 TOM1O60784 492 aa29.21■■■□□ 2.27
TMEM41A-202ENST00000382227 SCAF1Q9H7N4 1312 aaKnown RBP29.17■■■□□ 2.26
TMEM41A-202ENST00000382227 SCAF11Q99590 1463 aaKnown RBP29.17■■■□□ 2.26
TMEM41A-202ENST00000382227 PIP4K2BP78356 416 aa29.16■■■□□ 2.26
TMEM41A-202ENST00000382227 ARHGAP23Q9P227 1491 aa29.15■■■□□ 2.26
TMEM41A-202ENST00000382227 SLIT1O75093 1534 aa29.15■■■□□ 2.26
TMEM41A-202ENST00000382227 LMTK2Q8IWU2 1503 aa29.14■■■□□ 2.25
TMEM41A-202ENST00000382227 TXNDC2Q86VQ3 553 aa29.13■■■□□ 2.25
TMEM41A-202ENST00000382227 LTKP29376 864 aa29.12■■■□□ 2.25
TMEM41A-202ENST00000382227 ADGRL2O95490 1459 aa29.11■■■□□ 2.25
TMEM41A-202ENST00000382227 HSPA1LP34931 641 aa29.1■■■□□ 2.25
TMEM41A-202ENST00000382227 FAM50AQ14320 339 aaKnown RBP29.1■■■□□ 2.25
TMEM41A-202ENST00000382227 STRCP1A6NGW2 1772 aa29.1■■■□□ 2.25
TMEM41A-202ENST00000382227 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
TMEM41A-202ENST00000382227 LRRC7Q96NW7 1537 aa29.09■■■□□ 2.25
TMEM41A-202ENST00000382227 EID1Q9Y6B2 187 aa29.08■■■□□ 2.25
TMEM41A-202ENST00000382227 STAG3Q9UJ98 1225 aa29.07■■■□□ 2.24
TMEM41A-202ENST00000382227 SYNMO15061 1565 aa29.06■■■□□ 2.24
TMEM41A-202ENST00000382227 TMEM2Q9UHN6 1383 aa29.06■■■□□ 2.24
TMEM41A-202ENST00000382227 SOCS7O14512 581 aa29.06■■■□□ 2.24
TMEM41A-202ENST00000382227 ALKQ9UM73 1620 aa29.05■■■□□ 2.24
TMEM41A-202ENST00000382227 IDI1Q13907 227 aa29.05■■■□□ 2.24
TMEM41A-202ENST00000382227 EFCAB6Q5THR3 1501 aa29.04■■■□□ 2.24
TMEM41A-202ENST00000382227 KDM5AP29375 1690 aaKnown RBP29.02■■■□□ 2.24
TMEM41A-202ENST00000382227 NOS1P29475 1434 aa29.02■■■□□ 2.24
TMEM41A-202ENST00000382227 ANKRD50Q9ULJ7 1429 aa29.02■■■□□ 2.24
TMEM41A-202ENST00000382227 SLC52A1Q9NWF4 448 aa28.95■■■□□ 2.22
TMEM41A-202ENST00000382227 RPRD2Q5VT52 1461 aaKnown RBP28.95■■■□□ 2.22
TMEM41A-202ENST00000382227 ADGRB3O60242 1522 aa28.93■■■□□ 2.22
TMEM41A-202ENST00000382227 MED1Q15648 1581 aaPredicted RBP28.92■■■□□ 2.22
TMEM41A-202ENST00000382227 TET3O43151 1660 aa28.88■■■□□ 2.21
TMEM41A-202ENST00000382227 SLC26A8Q96RN1 970 aa28.87■■■□□ 2.21
TMEM41A-202ENST00000382227 KCNA6P17658 529 aa28.86■■■□□ 2.21
TMEM41A-202ENST00000382227 ROCK1Q13464 1354 aa28.86■■■□□ 2.21
TMEM41A-202ENST00000382227 XIRP1Q702N8 1843 aaKnown RBP28.85■■■□□ 2.21
TMEM41A-202ENST00000382227 UNC13BO14795 1591 aa28.85■■■□□ 2.21
TMEM41A-202ENST00000382227 SENP3Q9H4L4 574 aaPredicted RBP28.84■■■□□ 2.21
TMEM41A-202ENST00000382227 GCC2Q8IWJ2 1684 aa28.81■■■□□ 2.2
TMEM41A-202ENST00000382227 TMEM94Q12767 1356 aa28.81■■■□□ 2.2
TMEM41A-202ENST00000382227 ZFYVE9O95405 1425 aa28.79■■■□□ 2.2
TMEM41A-202ENST00000382227 BCANQ96GW7 911 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms