RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 MAGI2Q86UL8 1455 aa22.78■■□□□ 1.24
LINC00487-201ENST00000382045 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
LINC00487-201ENST00000382045 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
LINC00487-201ENST00000382045 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
LINC00487-201ENST00000382045 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
LINC00487-201ENST00000382045 PLA2R1Q13018 1463 aa22.77■■□□□ 1.24
LINC00487-201ENST00000382045 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
LINC00487-201ENST00000382045 ERBINQ96RT1 1412 aa22.76■■□□□ 1.23
LINC00487-201ENST00000382045 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
LINC00487-201ENST00000382045 TSHZ2Q9NRE2 1034 aa22.74■■□□□ 1.23
LINC00487-201ENST00000382045 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
LINC00487-201ENST00000382045 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
LINC00487-201ENST00000382045 EFCAB2Q5VUJ9 269 aa22.71■■□□□ 1.23
LINC00487-201ENST00000382045 E9PCH4 1651 aa22.71■■□□□ 1.23
LINC00487-201ENST00000382045 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.23
LINC00487-201ENST00000382045 ATP10AO60312 1499 aa22.7■■□□□ 1.22
LINC00487-201ENST00000382045 ARAP3Q8WWN8 1544 aa22.7■■□□□ 1.22
LINC00487-201ENST00000382045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.7■■□□□ 1.22
LINC00487-201ENST00000382045 A2MP01023 1474 aa22.7■■□□□ 1.22
LINC00487-201ENST00000382045 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
LINC00487-201ENST00000382045 ZBED9Q6R2W3 1325 aa22.69■■□□□ 1.22
LINC00487-201ENST00000382045 TRAPPC8Q9Y2L5 1435 aa22.69■■□□□ 1.22
LINC00487-201ENST00000382045 LAMC1P11047 1609 aa22.67■■□□□ 1.22
LINC00487-201ENST00000382045 ZFYVE16Q7Z3T8 1539 aa22.64■■□□□ 1.21
LINC00487-201ENST00000382045 GPRASP1Q5JY77 1395 aa22.64■■□□□ 1.21
LINC00487-201ENST00000382045 EIF2AK4Q9P2K8 1649 aaKnown RBP22.63■■□□□ 1.21
LINC00487-201ENST00000382045 PRDM15P57071 1507 aaPredicted RBP22.62■■□□□ 1.21
LINC00487-201ENST00000382045 RGL3Q3MIN7 710 aa22.61■■□□□ 1.21
LINC00487-201ENST00000382045 RTEL1-TNFRSF6BF6WH68 1400 aa22.61■■□□□ 1.21
LINC00487-201ENST00000382045 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
LINC00487-201ENST00000382045 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
LINC00487-201ENST00000382045 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
LINC00487-201ENST00000382045 DEPDC5O75140 1603 aa22.58■■□□□ 1.21
LINC00487-201ENST00000382045 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
LINC00487-201ENST00000382045 NBPF1Q3BBV0 1214 aa22.57■■□□□ 1.2
LINC00487-201ENST00000382045 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
LINC00487-201ENST00000382045 RNF17Q9BXT8 1623 aaKnown RBP22.56■■□□□ 1.2
LINC00487-201ENST00000382045 INO80Q9ULG1 1556 aaPredicted RBP22.56■■□□□ 1.2
LINC00487-201ENST00000382045 KTN1Q86UP2 1357 aaKnown RBP22.56■■□□□ 1.2
LINC00487-201ENST00000382045 IRX6P78412 446 aaPredicted RBP22.54■■□□□ 1.2
LINC00487-201ENST00000382045 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
LINC00487-201ENST00000382045 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
LINC00487-201ENST00000382045 SPHKAPQ2M3C7 1700 aa22.53■■□□□ 1.2
LINC00487-201ENST00000382045 TRPM2O94759 1503 aa22.53■■□□□ 1.2
LINC00487-201ENST00000382045 FANCAO15360 1455 aa22.52■■□□□ 1.2
LINC00487-201ENST00000382045 CEP152O94986 1710 aa22.52■■□□□ 1.2
LINC00487-201ENST00000382045 ERICH6BQ5W0A0 696 aa22.52■■□□□ 1.2
LINC00487-201ENST00000382045 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
LINC00487-201ENST00000382045 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
LINC00487-201ENST00000382045 TET3O43151 1660 aa22.5■■□□□ 1.19
LINC00487-201ENST00000382045 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
LINC00487-201ENST00000382045 RALBP1Q15311 655 aa22.49■■□□□ 1.19
LINC00487-201ENST00000382045 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
LINC00487-201ENST00000382045 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
LINC00487-201ENST00000382045 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
LINC00487-201ENST00000382045 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
LINC00487-201ENST00000382045 TESK2Q96S53 571 aa22.48■■□□□ 1.19
LINC00487-201ENST00000382045 VWDEQ8N2E2 1590 aa22.47■■□□□ 1.19
LINC00487-201ENST00000382045 PTPRTO14522 1441 aa22.47■■□□□ 1.19
LINC00487-201ENST00000382045 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
LINC00487-201ENST00000382045 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
LINC00487-201ENST00000382045 DISP3Q9P2K9 1392 aa22.46■■□□□ 1.19
LINC00487-201ENST00000382045 ADGRL1O94910 1474 aa22.45■■□□□ 1.18
LINC00487-201ENST00000382045 PARD3Q8TEW0 1356 aa22.44■■□□□ 1.18
LINC00487-201ENST00000382045 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
LINC00487-201ENST00000382045 ASXL2Q76L83 1435 aa22.43■■□□□ 1.18
LINC00487-201ENST00000382045 PER1O15534 1290 aaPredicted RBP22.42■■□□□ 1.18
LINC00487-201ENST00000382045 MROH1Q8NDA8 1641 aa22.41■■□□□ 1.18
LINC00487-201ENST00000382045 SCAPERQ9BY12 1400 aa22.41■■□□□ 1.18
LINC00487-201ENST00000382045 PPP4R2Q9NY27 417 aa22.4■■□□□ 1.18
LINC00487-201ENST00000382045 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
LINC00487-201ENST00000382045 KANK1Q14678 1352 aa22.38■■□□□ 1.17
LINC00487-201ENST00000382045 KIDINS220Q9ULH0 1771 aa22.37■■□□□ 1.17
LINC00487-201ENST00000382045 NEURL4Q96JN8 1562 aa22.37■■□□□ 1.17
LINC00487-201ENST00000382045 TMF1P82094 1093 aa22.37■■□□□ 1.17
LINC00487-201ENST00000382045 NLRP13Q86W25 1043 aa22.36■■□□□ 1.17
LINC00487-201ENST00000382045 WASHC2CQ9Y4E1 1318 aa22.36■■□□□ 1.17
LINC00487-201ENST00000382045 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
LINC00487-201ENST00000382045 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
LINC00487-201ENST00000382045 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.17
LINC00487-201ENST00000382045 KIF3BO15066 747 aa22.33■■□□□ 1.17
LINC00487-201ENST00000382045 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.16
LINC00487-201ENST00000382045 EFCAB6Q5THR3 1501 aa22.32■■□□□ 1.16
LINC00487-201ENST00000382045 PANK3Q9H999 370 aa22.31■■□□□ 1.16
LINC00487-201ENST00000382045 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
LINC00487-201ENST00000382045 ZNF518AQ6AHZ1 1483 aa22.3■■□□□ 1.16
LINC00487-201ENST00000382045 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
LINC00487-201ENST00000382045 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
LINC00487-201ENST00000382045 PPRC1Q5VV67 1664 aaKnown RBP22.29■■□□□ 1.16
LINC00487-201ENST00000382045 KIF1BO60333 1816 aa22.29■■□□□ 1.16
LINC00487-201ENST00000382045 UGGT1Q9NYU2 1555 aa22.28■■□□□ 1.16
LINC00487-201ENST00000382045 IFT172Q9UG01 1749 aa22.28■■□□□ 1.16
LINC00487-201ENST00000382045 CFAP74Q9C0B2 1584 aa22.27■■□□□ 1.16
LINC00487-201ENST00000382045 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
LINC00487-201ENST00000382045 SYNMO15061 1565 aa22.27■■□□□ 1.15
LINC00487-201ENST00000382045 MYT1Q01538 1121 aa22.26■■□□□ 1.15
LINC00487-201ENST00000382045 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
LINC00487-201ENST00000382045 MYOM2P54296 1465 aa22.26■■□□□ 1.15
LINC00487-201ENST00000382045 CC2D1BQ5T0F9 858 aaKnown RBP22.25■■□□□ 1.15
LINC00487-201ENST00000382045 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms