RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
LINC00487-201ENST00000382045 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
LINC00487-201ENST00000382045 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
LINC00487-201ENST00000382045 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
LINC00487-201ENST00000382045 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
LINC00487-201ENST00000382045 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
LINC00487-201ENST00000382045 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
LINC00487-201ENST00000382045 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
LINC00487-201ENST00000382045 SCRIBQ14160 1630 aa28.14■■■□□ 2.09
LINC00487-201ENST00000382045 ABCC9O60706 1549 aa28.14■■■□□ 2.09
LINC00487-201ENST00000382045 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
LINC00487-201ENST00000382045 NACADO15069 1562 aa27.98■■■□□ 2.07
LINC00487-201ENST00000382045 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
LINC00487-201ENST00000382045 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
LINC00487-201ENST00000382045 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.98
LINC00487-201ENST00000382045 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
LINC00487-201ENST00000382045 WIZO95785 1651 aa27.24■■□□□ 1.95
LINC00487-201ENST00000382045 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.95
LINC00487-201ENST00000382045 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
LINC00487-201ENST00000382045 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
LINC00487-201ENST00000382045 TRIM41Q8WV44 630 aa27.02■■□□□ 1.92
LINC00487-201ENST00000382045 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
LINC00487-201ENST00000382045 EIF4G1Q04637 1599 aaKnown RBP26.87■■□□□ 1.89
LINC00487-201ENST00000382045 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
LINC00487-201ENST00000382045 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
LINC00487-201ENST00000382045 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
LINC00487-201ENST00000382045 HRCP23327 699 aa26.77■■□□□ 1.88
LINC00487-201ENST00000382045 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
LINC00487-201ENST00000382045 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
LINC00487-201ENST00000382045 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
LINC00487-201ENST00000382045 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
LINC00487-201ENST00000382045 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
LINC00487-201ENST00000382045 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
LINC00487-201ENST00000382045 ABCC8Q09428 1581 aa26.48■■□□□ 1.83
LINC00487-201ENST00000382045 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
LINC00487-201ENST00000382045 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
LINC00487-201ENST00000382045 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
LINC00487-201ENST00000382045 SOGA1O94964 1423 aa26.14■■□□□ 1.77
LINC00487-201ENST00000382045 PPARGC1BQ86YN6 1023 aaKnown RBP26.13■■□□□ 1.77
LINC00487-201ENST00000382045 EEA1Q15075 1411 aa26.1■■□□□ 1.77
LINC00487-201ENST00000382045 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
LINC00487-201ENST00000382045 RUSC2Q8N2Y8 1516 aa26.02■■□□□ 1.76
LINC00487-201ENST00000382045 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
LINC00487-201ENST00000382045 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
LINC00487-201ENST00000382045 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
LINC00487-201ENST00000382045 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
LINC00487-201ENST00000382045 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
LINC00487-201ENST00000382045 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
LINC00487-201ENST00000382045 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
LINC00487-201ENST00000382045 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
LINC00487-201ENST00000382045 KIF21BO75037 1637 aa25.8■■□□□ 1.72
LINC00487-201ENST00000382045 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
LINC00487-201ENST00000382045 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
LINC00487-201ENST00000382045 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
LINC00487-201ENST00000382045 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
LINC00487-201ENST00000382045 CFTRP13569 1480 aa25.56■■□□□ 1.68
LINC00487-201ENST00000382045 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
LINC00487-201ENST00000382045 CUX1P39880 1505 aa25.52■■□□□ 1.68
LINC00487-201ENST00000382045 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
LINC00487-201ENST00000382045 CLIP1P30622 1438 aa25.5■■□□□ 1.67
LINC00487-201ENST00000382045 TTBK1Q5TCY1 1321 aaPredicted RBP25.46■■□□□ 1.67
LINC00487-201ENST00000382045 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
LINC00487-201ENST00000382045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
LINC00487-201ENST00000382045 VPS8Q8N3P4 1428 aa25.4■■□□□ 1.66
LINC00487-201ENST00000382045 PRXQ9BXM0 1461 aa25.4■■□□□ 1.66
LINC00487-201ENST00000382045 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
LINC00487-201ENST00000382045 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
LINC00487-201ENST00000382045 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
LINC00487-201ENST00000382045 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
LINC00487-201ENST00000382045 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
LINC00487-201ENST00000382045 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
LINC00487-201ENST00000382045 APLP2Q06481 763 aa25.12■■□□□ 1.61
LINC00487-201ENST00000382045 CUX2O14529 1486 aa25.09■■□□□ 1.61
LINC00487-201ENST00000382045 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
LINC00487-201ENST00000382045 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
LINC00487-201ENST00000382045 IGF1RP08069 1367 aa25.03■■□□□ 1.6
LINC00487-201ENST00000382045 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
LINC00487-201ENST00000382045 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
LINC00487-201ENST00000382045 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
LINC00487-201ENST00000382045 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
LINC00487-201ENST00000382045 NESP48681 1621 aa24.88■■□□□ 1.57
LINC00487-201ENST00000382045 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
LINC00487-201ENST00000382045 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
LINC00487-201ENST00000382045 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
LINC00487-201ENST00000382045 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.57
LINC00487-201ENST00000382045 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
LINC00487-201ENST00000382045 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
LINC00487-201ENST00000382045 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
LINC00487-201ENST00000382045 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
LINC00487-201ENST00000382045 CUL7Q14999 1698 aa24.73■■□□□ 1.55
LINC00487-201ENST00000382045 MAP3K1Q13233 1512 aa24.73■■□□□ 1.55
LINC00487-201ENST00000382045 TIAM1Q13009 1591 aa24.73■■□□□ 1.55
LINC00487-201ENST00000382045 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
LINC00487-201ENST00000382045 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
LINC00487-201ENST00000382045 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
LINC00487-201ENST00000382045 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.54
LINC00487-201ENST00000382045 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.54
LINC00487-201ENST00000382045 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
LINC00487-201ENST00000382045 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
LINC00487-201ENST00000382045 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms