RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.4
NHLRC3-202ENST00000379600 PDE4AP27815 886 aa12.51□□□□□ -0.41
NHLRC3-202ENST00000379600 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
NHLRC3-202ENST00000379600 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
NHLRC3-202ENST00000379600 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
NHLRC3-202ENST00000379600 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
NHLRC3-202ENST00000379600 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
NHLRC3-202ENST00000379600 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
NHLRC3-202ENST00000379600 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
NHLRC3-202ENST00000379600 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
NHLRC3-202ENST00000379600 ABCA8O94911 1581 aa12.49□□□□□ -0.41
NHLRC3-202ENST00000379600 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
NHLRC3-202ENST00000379600 BLMP54132 1417 aaPredicted RBP12.48□□□□□ -0.41
NHLRC3-202ENST00000379600 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
NHLRC3-202ENST00000379600 PLIN1O60240 522 aa12.47□□□□□ -0.41
NHLRC3-202ENST00000379600 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
NHLRC3-202ENST00000379600 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
NHLRC3-202ENST00000379600 MS4A1P11836 297 aa12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 PDE3BQ13370 1112 aa12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 NBPF1Q3BBV0 1214 aa12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.42
NHLRC3-202ENST00000379600 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 ATP10BO94823 1461 aa12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 PLA2R1Q13018 1463 aa12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
NHLRC3-202ENST00000379600 LAMC1P11047 1609 aa12.44□□□□□ -0.42
NHLRC3-202ENST00000379600 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
NHLRC3-202ENST00000379600 ZMYM4Q5VZL5 1548 aa12.44□□□□□ -0.42
NHLRC3-202ENST00000379600 A2MP01023 1474 aa12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 TESK2Q96S53 571 aa12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
NHLRC3-202ENST00000379600 INSRP06213 1382 aa12.42□□□□□ -0.42
NHLRC3-202ENST00000379600 NEFMP07197 916 aa12.42□□□□□ -0.42
NHLRC3-202ENST00000379600 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
NHLRC3-202ENST00000379600 SYNJ2O15056 1496 aa12.41□□□□□ -0.42
NHLRC3-202ENST00000379600 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
NHLRC3-202ENST00000379600 UNC13BO14795 1591 aa12.4□□□□□ -0.42
NHLRC3-202ENST00000379600 NUP160Q12769 1436 aa12.4□□□□□ -0.42
NHLRC3-202ENST00000379600 KDM2BQ8NHM5 1336 aa12.39□□□□□ -0.43
NHLRC3-202ENST00000379600 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
NHLRC3-202ENST00000379600 CCDC144AA2RUR9 1427 aa12.39□□□□□ -0.43
NHLRC3-202ENST00000379600 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 TSPY4P0CV99 314 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 TSPY10P0CW01 314 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 PANK3Q9H999 370 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
NHLRC3-202ENST00000379600 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
NHLRC3-202ENST00000379600 RGL3Q3MIN7 710 aa12.37□□□□□ -0.43
NHLRC3-202ENST00000379600 PLEKHH2Q8IVE3 1493 aa12.37□□□□□ -0.43
NHLRC3-202ENST00000379600 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
NHLRC3-202ENST00000379600 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
NHLRC3-202ENST00000379600 IQGAP3Q86VI3 1631 aa12.36□□□□□ -0.43
NHLRC3-202ENST00000379600 MAGI2Q86UL8 1455 aa12.36□□□□□ -0.43
NHLRC3-202ENST00000379600 ADAMTS8Q9UP79 889 aa12.35□□□□□ -0.43
NHLRC3-202ENST00000379600 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
NHLRC3-202ENST00000379600 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
NHLRC3-202ENST00000379600 SYCP2Q9BX26 1530 aa12.34□□□□□ -0.43
NHLRC3-202ENST00000379600 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
NHLRC3-202ENST00000379600 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
NHLRC3-202ENST00000379600 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
NHLRC3-202ENST00000379600 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.43
NHLRC3-202ENST00000379600 SLC4A3P48751 1232 aa12.33□□□□□ -0.43
NHLRC3-202ENST00000379600 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
NHLRC3-202ENST00000379600 FBLN2P98095 1184 aa12.32□□□□□ -0.44
NHLRC3-202ENST00000379600 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
NHLRC3-202ENST00000379600 TTC37Q6PGP7 1564 aa12.32□□□□□ -0.44
NHLRC3-202ENST00000379600 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
NHLRC3-202ENST00000379600 PLXNC1O60486 1568 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 ATP10AO60312 1499 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 CLASP1Q7Z460 1538 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 MYOM1P52179 1685 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
NHLRC3-202ENST00000379600 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
NHLRC3-202ENST00000379600 PPP2R1AP30153 589 aa12.29□□□□□ -0.44
NHLRC3-202ENST00000379600 TMF1P82094 1093 aa12.29□□□□□ -0.44
NHLRC3-202ENST00000379600 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
NHLRC3-202ENST00000379600 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
NHLRC3-202ENST00000379600 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
NHLRC3-202ENST00000379600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
NHLRC3-202ENST00000379600 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
NHLRC3-202ENST00000379600 VIRMAQ69YN4 1812 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms