RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 FAM135AQ9P2D6 1515 aa34.96■■■■□ 3.19
CCDC107-203ENST00000378407 PTPRTO14522 1441 aa34.95■■■■□ 3.19
CCDC107-203ENST00000378407 WASHC2CQ9Y4E1 1318 aa34.94■■■■□ 3.18
CCDC107-203ENST00000378407 CEP170BQ9Y4F5 1589 aaPredicted RBP34.94■■■■□ 3.18
CCDC107-203ENST00000378407 ZNF142P52746 1687 aaPredicted RBP34.94■■■■□ 3.18
CCDC107-203ENST00000378407 PTPN23Q9H3S7 1636 aa34.87■■■■□ 3.17
CCDC107-203ENST00000378407 PZPP20742 1482 aa34.86■■■■□ 3.17
CCDC107-203ENST00000378407 TNRQ92752 1358 aa34.85■■■■□ 3.17
CCDC107-203ENST00000378407 RNF17Q9BXT8 1623 aaKnown RBP34.83■■■■□ 3.17
CCDC107-203ENST00000378407 EIF2AK4Q9P2K8 1649 aaKnown RBP34.83■■■■□ 3.17
CCDC107-203ENST00000378407 NCKAP5LQ9HCH0 1330 aa34.82■■■■□ 3.17
CCDC107-203ENST00000378407 A2ML1A8K2U0 1454 aa34.82■■■■□ 3.16
CCDC107-203ENST00000378407 PLA2R1Q13018 1463 aa34.82■■■■□ 3.16
CCDC107-203ENST00000378407 FGD6Q6ZV73 1430 aa34.81■■■■□ 3.16
CCDC107-203ENST00000378407 SHANK2Q9UPX8 1470 aa34.8■■■■□ 3.16
CCDC107-203ENST00000378407 FBXO31Q5XUX0 539 aaPredicted RBP34.8■■■■□ 3.16
CCDC107-203ENST00000378407 DUOX2Q9NRD8 1548 aa34.8■■■■□ 3.16
CCDC107-203ENST00000378407 CROCC2H7BZ55 1655 aa34.79■■■■□ 3.16
CCDC107-203ENST00000378407 ZC3H13Q5T200 1668 aaKnown RBP34.77■■■■□ 3.16
CCDC107-203ENST00000378407 PKD2Q13563 968 aa34.77■■■■□ 3.16
CCDC107-203ENST00000378407 KIF15Q9NS87 1388 aa34.76■■■■□ 3.16
CCDC107-203ENST00000378407 ABCC5O15440 1437 aa34.76■■■■□ 3.16
CCDC107-203ENST00000378407 ABCC3O15438 1527 aa34.75■■■■□ 3.15
CCDC107-203ENST00000378407 DNMT1P26358 1616 aaKnown RBP34.74■■■■□ 3.15
CCDC107-203ENST00000378407 DAPK1P53355 1430 aa34.74■■■■□ 3.15
CCDC107-203ENST00000378407 TCOF1Q13428 1488 aaKnown RBP34.72■■■■□ 3.15
CCDC107-203ENST00000378407 RRP7BPQ9NSQ0 103 aa34.71■■■■□ 3.15
CCDC107-203ENST00000378407 ERBINQ96RT1 1412 aa34.68■■■■□ 3.14
CCDC107-203ENST00000378407 NLRP1Q9C000 1473 aa34.68■■■■□ 3.14
CCDC107-203ENST00000378407 MROH1Q8NDA8 1641 aa34.67■■■■□ 3.14
CCDC107-203ENST00000378407 LTBP4Q8N2S1 1624 aa34.66■■■■□ 3.14
CCDC107-203ENST00000378407 CEP152O94986 1710 aa34.64■■■■□ 3.14
CCDC107-203ENST00000378407 ANKRD30AQ9BXX3 1397 aa34.62■■■■□ 3.13
CCDC107-203ENST00000378407 CHIC2Q9UKJ5 165 aa34.62■■■■□ 3.13
CCDC107-203ENST00000378407 UGGT1Q9NYU2 1555 aa34.62■■■■□ 3.13
CCDC107-203ENST00000378407 ZNF335Q9H4Z2 1342 aaPredicted RBP34.61■■■■□ 3.13
CCDC107-203ENST00000378407 FAM50AQ14320 339 aaKnown RBP34.61■■■■□ 3.13
CCDC107-203ENST00000378407 PRDM15P57071 1507 aaPredicted RBP34.6■■■■□ 3.13
CCDC107-203ENST00000378407 POLR1AO95602 1720 aaPredicted RBP34.6■■■■□ 3.13
CCDC107-203ENST00000378407 ERVK-7P63135 1459 aa34.59■■■■□ 3.13
CCDC107-203ENST00000378407 SPATA31D1Q6ZQQ2 1576 aa34.59■■■■□ 3.13
CCDC107-203ENST00000378407 THEMISQ8N1K5 641 aaPredicted RBP34.59■■■■□ 3.13
CCDC107-203ENST00000378407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.59■■■■□ 3.13
CCDC107-203ENST00000378407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.57■■■■□ 3.12
CCDC107-203ENST00000378407 IQSEC2Q5JU85 1478 aa34.57■■■■□ 3.12
CCDC107-203ENST00000378407 KANK1Q14678 1352 aa34.56■■■■□ 3.12
CCDC107-203ENST00000378407 ANKLE2Q86XL3 938 aa34.54■■■■□ 3.12
CCDC107-203ENST00000378407 NEURL4Q96JN8 1562 aa34.51■■■■□ 3.12
CCDC107-203ENST00000378407 DEPDC5O75140 1603 aa34.5■■■■□ 3.11
CCDC107-203ENST00000378407 ARHGAP31Q2M1Z3 1444 aa34.46■■■■□ 3.11
CCDC107-203ENST00000378407 ADGRL2O95490 1459 aa34.46■■■■□ 3.11
CCDC107-203ENST00000378407 NPHP4O75161 1426 aaPredicted RBP34.43■■■■□ 3.1
CCDC107-203ENST00000378407 CFAP65Q6ZU64 1925 aaKnown RBP34.4■■■■□ 3.1
CCDC107-203ENST00000378407 UBAP1LF5GYI3 381 aa34.37■■■■□ 3.09
CCDC107-203ENST00000378407 MED14O60244 1454 aa34.37■■■■□ 3.09
CCDC107-203ENST00000378407 UBR1Q8IWV7 1749 aa34.36■■■■□ 3.09
CCDC107-203ENST00000378407 IQGAP1P46940 1657 aa34.36■■■■□ 3.09
CCDC107-203ENST00000378407 CPS1P31327 1500 aa34.35■■■■□ 3.09
CCDC107-203ENST00000378407 LMTK2Q8IWU2 1503 aa34.35■■■■□ 3.09
CCDC107-203ENST00000378407 ANKRD50Q9ULJ7 1429 aa34.35■■■■□ 3.09
CCDC107-203ENST00000378407 VWDEQ8N2E2 1590 aa34.32■■■■□ 3.09
CCDC107-203ENST00000378407 STAG3Q9UJ98 1225 aa34.32■■■■□ 3.08
CCDC107-203ENST00000378407 EFCAB6Q5THR3 1501 aa34.3■■■■□ 3.08
CCDC107-203ENST00000378407 SCAF11Q99590 1463 aaKnown RBP34.29■■■■□ 3.08
CCDC107-203ENST00000378407 PPARGC1BQ86YN6 1023 aaKnown RBP34.28■■■■□ 3.08
CCDC107-203ENST00000378407 PIK3C2BO00750 1634 aa34.27■■■■□ 3.08
CCDC107-203ENST00000378407 EID1Q9Y6B2 187 aa34.25■■■■□ 3.07
CCDC107-203ENST00000378407 TXNDC2Q86VQ3 553 aa34.23■■■■□ 3.07
CCDC107-203ENST00000378407 SLIT1O75093 1534 aa34.23■■■■□ 3.07
CCDC107-203ENST00000378407 ITGAEP38570 1179 aa34.22■■■■□ 3.07
CCDC107-203ENST00000378407 SCAF1Q9H7N4 1312 aaKnown RBP34.22■■■■□ 3.07
CCDC107-203ENST00000378407 ARHGAP23Q9P227 1491 aa34.21■■■■□ 3.07
CCDC107-203ENST00000378407 SYNMO15061 1565 aa34.19■■■■□ 3.06
CCDC107-203ENST00000378407 ROCK1Q13464 1354 aa34.19■■■■□ 3.06
CCDC107-203ENST00000378407 TMEM2Q9UHN6 1383 aa34.17■■■■□ 3.06
CCDC107-203ENST00000378407 RPRD2Q5VT52 1461 aaKnown RBP34.16■■■■□ 3.06
CCDC107-203ENST00000378407 NOS1P29475 1434 aa34.16■■■■□ 3.06
CCDC107-203ENST00000378407 LTKP29376 864 aa34.16■■■■□ 3.06
CCDC107-203ENST00000378407 IDI1Q13907 227 aa34.16■■■■□ 3.06
CCDC107-203ENST00000378407 TOM1O60784 492 aa34.15■■■■□ 3.06
CCDC107-203ENST00000378407 TET3O43151 1660 aa34.15■■■■□ 3.06
CCDC107-203ENST00000378407 KDM5AP29375 1690 aaKnown RBP34.15■■■■□ 3.06
CCDC107-203ENST00000378407 UNC13BO14795 1591 aa34.15■■■■□ 3.06
CCDC107-203ENST00000378407 DISP3Q9P2K9 1392 aa34.14■■■■□ 3.06
CCDC107-203ENST00000378407 ADGRB3O60242 1522 aa34.14■■■■□ 3.06
CCDC107-203ENST00000378407 PIP4K2BP78356 416 aa34.13■■■■□ 3.05
CCDC107-203ENST00000378407 SLC52A1Q9NWF4 448 aa34.11■■■■□ 3.05
CCDC107-203ENST00000378407 GCC2Q8IWJ2 1684 aa34.08■■■■□ 3.05
CCDC107-203ENST00000378407 STRCP1A6NGW2 1772 aa34.06■■■■□ 3.04
CCDC107-203ENST00000378407 LRRC7Q96NW7 1537 aa34.04■■■■□ 3.04
CCDC107-203ENST00000378407 BCANQ96GW7 911 aa34.01■■■■□ 3.03
CCDC107-203ENST00000378407 IQGAP3Q86VI3 1631 aa34.01■■■■□ 3.03
CCDC107-203ENST00000378407 NUP155O75694 1391 aa34■■■■□ 3.03
CCDC107-203ENST00000378407 E9PCH4 1651 aa33.96■■■■□ 3.03
CCDC107-203ENST00000378407 CHGAP10645 457 aaKnown RBP33.96■■■■□ 3.03
CCDC107-203ENST00000378407 PPP1R15AO75807 674 aaPredicted RBP33.95■■■■□ 3.03
CCDC107-203ENST00000378407 HSPA1LP34931 641 aa33.94■■■■□ 3.02
CCDC107-203ENST00000378407 SLC26A8Q96RN1 970 aa33.94■■■■□ 3.02
CCDC107-203ENST00000378407 RRBP1Q9P2E9 1410 aaKnown RBP33.92■■■■□ 3.02
CCDC107-203ENST00000378407 HDGFP51858 240 aaKnown RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms