RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
TCEA3-202ENST00000374602 NCBP3Q53F19 620 aaKnown RBP10.41□□□□□ -0.74
TCEA3-202ENST00000374602 CPS1P31327 1500 aa10.41□□□□□ -0.74
TCEA3-202ENST00000374602 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
TCEA3-202ENST00000374602 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.74
TCEA3-202ENST00000374602 GGT6Q6P531 493 aa10.4□□□□□ -0.74
TCEA3-202ENST00000374602 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
TCEA3-202ENST00000374602 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
TCEA3-202ENST00000374602 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
TCEA3-202ENST00000374602 MED1Q15648 1581 aaPredicted RBP10.38□□□□□ -0.75
TCEA3-202ENST00000374602 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
TCEA3-202ENST00000374602 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
TCEA3-202ENST00000374602 RTEL1-TNFRSF6BF6WH68 1400 aa10.37□□□□□ -0.75
TCEA3-202ENST00000374602 PZPP20742 1482 aa10.36□□□□□ -0.75
TCEA3-202ENST00000374602 NEURL4Q96JN8 1562 aa10.36□□□□□ -0.75
TCEA3-202ENST00000374602 TNRQ92752 1358 aa10.36□□□□□ -0.75
TCEA3-202ENST00000374602 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
TCEA3-202ENST00000374602 SYNMO15061 1565 aa10.35□□□□□ -0.75
TCEA3-202ENST00000374602 IQGAP1P46940 1657 aa10.35□□□□□ -0.75
TCEA3-202ENST00000374602 TOM1O60784 492 aa10.35□□□□□ -0.75
TCEA3-202ENST00000374602 NLRP1Q9C000 1473 aa10.35□□□□□ -0.75
TCEA3-202ENST00000374602 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
TCEA3-202ENST00000374602 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
TCEA3-202ENST00000374602 SHANK2Q9UPX8 1470 aa10.34□□□□□ -0.75
TCEA3-202ENST00000374602 UGGT1Q9NYU2 1555 aa10.34□□□□□ -0.75
TCEA3-202ENST00000374602 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
TCEA3-202ENST00000374602 CAMSAP2Q08AD1 1489 aa10.33□□□□□ -0.76
TCEA3-202ENST00000374602 MBD5Q9P267 1494 aa10.32□□□□□ -0.76
TCEA3-202ENST00000374602 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
TCEA3-202ENST00000374602 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
TCEA3-202ENST00000374602 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
TCEA3-202ENST00000374602 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
TCEA3-202ENST00000374602 KIF3BO15066 747 aa10.3□□□□□ -0.76
TCEA3-202ENST00000374602 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
TCEA3-202ENST00000374602 ANKLE2Q86XL3 938 aa10.3□□□□□ -0.76
TCEA3-202ENST00000374602 NPHP4O75161 1426 aaPredicted RBP10.3□□□□□ -0.76
TCEA3-202ENST00000374602 WASHC2CQ9Y4E1 1318 aa10.3□□□□□ -0.76
TCEA3-202ENST00000374602 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
TCEA3-202ENST00000374602 MED14O60244 1454 aa10.29□□□□□ -0.76
TCEA3-202ENST00000374602 NCOA2Q15596 1464 aa10.29□□□□□ -0.76
TCEA3-202ENST00000374602 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
TCEA3-202ENST00000374602 CEP152O94986 1710 aa10.28□□□□□ -0.76
TCEA3-202ENST00000374602 HSPA1LP34931 641 aa10.28□□□□□ -0.76
TCEA3-202ENST00000374602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.76
TCEA3-202ENST00000374602 MAST1Q9Y2H9 1570 aa10.27□□□□□ -0.76
TCEA3-202ENST00000374602 MIA2Q96PC5 1412 aa10.27□□□□□ -0.77
TCEA3-202ENST00000374602 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
TCEA3-202ENST00000374602 ZNF644Q9H582 1327 aaPredicted RBP10.27□□□□□ -0.77
TCEA3-202ENST00000374602 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
TCEA3-202ENST00000374602 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
TCEA3-202ENST00000374602 UBR1Q8IWV7 1749 aa10.26□□□□□ -0.77
TCEA3-202ENST00000374602 ABCC3O15438 1527 aa10.26□□□□□ -0.77
TCEA3-202ENST00000374602 STRCP1A6NGW2 1772 aa10.25□□□□□ -0.77
TCEA3-202ENST00000374602 ERVK-7P63135 1459 aa10.24□□□□□ -0.77
TCEA3-202ENST00000374602 FBXO31Q5XUX0 539 aaPredicted RBP10.23□□□□□ -0.77
TCEA3-202ENST00000374602 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
TCEA3-202ENST00000374602 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
TCEA3-202ENST00000374602 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
TCEA3-202ENST00000374602 DUOX2Q9NRD8 1548 aa10.22□□□□□ -0.77
TCEA3-202ENST00000374602 ALKQ9UM73 1620 aa10.22□□□□□ -0.77
TCEA3-202ENST00000374602 PRDM15P57071 1507 aaPredicted RBP10.21□□□□□ -0.78
TCEA3-202ENST00000374602 MROH1Q8NDA8 1641 aa10.21□□□□□ -0.78
TCEA3-202ENST00000374602 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
TCEA3-202ENST00000374602 XIRP1Q702N8 1843 aaKnown RBP10.19□□□□□ -0.78
TCEA3-202ENST00000374602 SLIT1O75093 1534 aa10.19□□□□□ -0.78
TCEA3-202ENST00000374602 LRRC9Q6ZRR7 1453 aa10.19□□□□□ -0.78
TCEA3-202ENST00000374602 PIK3C2BO00750 1634 aa10.18□□□□□ -0.78
TCEA3-202ENST00000374602 MYOM3Q5VTT5 1437 aa10.17□□□□□ -0.78
TCEA3-202ENST00000374602 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
TCEA3-202ENST00000374602 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
TCEA3-202ENST00000374602 MAPK8IP2Q13387 824 aaPredicted RBP10.17□□□□□ -0.78
TCEA3-202ENST00000374602 EID1Q9Y6B2 187 aa10.17□□□□□ -0.78
TCEA3-202ENST00000374602 ARHGAP23Q9P227 1491 aa10.17□□□□□ -0.78
TCEA3-202ENST00000374602 KANK1Q14678 1352 aa10.16□□□□□ -0.78
TCEA3-202ENST00000374602 ARHGAP31Q2M1Z3 1444 aa10.16□□□□□ -0.78
TCEA3-202ENST00000374602 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
TCEA3-202ENST00000374602 STAG3Q9UJ98 1225 aa10.15□□□□□ -0.78
TCEA3-202ENST00000374602 MAP3K1Q13233 1512 aa10.15□□□□□ -0.78
TCEA3-202ENST00000374602 EFCAB6Q5THR3 1501 aa10.15□□□□□ -0.78
TCEA3-202ENST00000374602 ROBO1Q9Y6N7 1651 aa10.15□□□□□ -0.79
TCEA3-202ENST00000374602 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
TCEA3-202ENST00000374602 PTPN23Q9H3S7 1636 aa10.14□□□□□ -0.79
TCEA3-202ENST00000374602 TXNDC2Q86VQ3 553 aa10.13□□□□□ -0.79
TCEA3-202ENST00000374602 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
TCEA3-202ENST00000374602 NKTRP30414 1462 aaKnown RBP10.12□□□□□ -0.79
TCEA3-202ENST00000374602 PHLPP1O60346 1717 aa10.12□□□□□ -0.79
TCEA3-202ENST00000374602 NWD1Q149M9 1564 aa10.11□□□□□ -0.79
TCEA3-202ENST00000374602 FAM135BQ49AJ0 1406 aa10.11□□□□□ -0.79
TCEA3-202ENST00000374602 TMEM2Q9UHN6 1383 aa10.11□□□□□ -0.79
TCEA3-202ENST00000374602 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
TCEA3-202ENST00000374602 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
TCEA3-202ENST00000374602 MSH6P52701 1360 aa10.09□□□□□ -0.79
TCEA3-202ENST00000374602 MYO5BQ9ULV0 1848 aa10.09□□□□□ -0.79
TCEA3-202ENST00000374602 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
TCEA3-202ENST00000374602 DAPK1P53355 1430 aa10.08□□□□□ -0.8
TCEA3-202ENST00000374602 APLP2Q06481 763 aa10.08□□□□□ -0.8
TCEA3-202ENST00000374602 TMEM94Q12767 1356 aa10.08□□□□□ -0.8
TCEA3-202ENST00000374602 ANKRD30AQ9BXX3 1397 aa10.08□□□□□ -0.8
TCEA3-202ENST00000374602 LTKP29376 864 aa10.07□□□□□ -0.8
TCEA3-202ENST00000374602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.07□□□□□ -0.86e-8■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms