RNA–Protein interactions for RNA: ENST00000374037.7

SPDEF-201, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPDEF, Length 1,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-201ENST00000374037 PRKRIP1Q9H875 184 aaPredicted RBP23.97■■□□□ 1.43
SPDEF-201ENST00000374037 ARID4BQ4LE39 1312 aaPredicted RBP23.97■■□□□ 1.43
SPDEF-201ENST00000374037 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.42
SPDEF-201ENST00000374037 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
SPDEF-201ENST00000374037 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
SPDEF-201ENST00000374037 ATP10AO60312 1499 aa23.94■■□□□ 1.42
SPDEF-201ENST00000374037 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
SPDEF-201ENST00000374037 ABCA9Q8IUA7 1624 aa23.92■■□□□ 1.42
SPDEF-201ENST00000374037 WDR7Q9Y4E6 1490 aa23.92■■□□□ 1.42
SPDEF-201ENST00000374037 RTEL1-TNFRSF6BF6WH68 1400 aa23.91■■□□□ 1.42
SPDEF-201ENST00000374037 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
SPDEF-201ENST00000374037 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.42
SPDEF-201ENST00000374037 ZFYVE16Q7Z3T8 1539 aa23.89■■□□□ 1.41
SPDEF-201ENST00000374037 NPM1P06748 294 aaKnown RBP eCLIP23.88■■□□□ 1.41
SPDEF-201ENST00000374037 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
SPDEF-201ENST00000374037 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
SPDEF-201ENST00000374037 LAMC1P11047 1609 aa23.88■■□□□ 1.41
SPDEF-201ENST00000374037 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
SPDEF-201ENST00000374037 A2MP01023 1474 aa23.86■■□□□ 1.41
SPDEF-201ENST00000374037 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
SPDEF-201ENST00000374037 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
SPDEF-201ENST00000374037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.85■■□□□ 1.41
SPDEF-201ENST00000374037 ROCK2O75116 1388 aaKnown RBP23.85■■□□□ 1.41
SPDEF-201ENST00000374037 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
SPDEF-201ENST00000374037 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
SPDEF-201ENST00000374037 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
SPDEF-201ENST00000374037 E9PCH4 1651 aa23.84■■□□□ 1.41
SPDEF-201ENST00000374037 INO80Q9ULG1 1556 aaPredicted RBP23.84■■□□□ 1.41
SPDEF-201ENST00000374037 HNRNPUQ00839 825 aaKnown RBP eCLIP23.83■■□□□ 1.41
SPDEF-201ENST00000374037 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.4
SPDEF-201ENST00000374037 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
SPDEF-201ENST00000374037 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
SPDEF-201ENST00000374037 GPRASP1Q5JY77 1395 aa23.81■■□□□ 1.4
SPDEF-201ENST00000374037 ERICH6BQ5W0A0 696 aa23.8■■□□□ 1.4
SPDEF-201ENST00000374037 ASXL2Q76L83 1435 aa23.79■■□□□ 1.4
SPDEF-201ENST00000374037 FANCAO15360 1455 aa23.79■■□□□ 1.4
SPDEF-201ENST00000374037 BCANQ96GW7 911 aa23.79■■□□□ 1.4
SPDEF-201ENST00000374037 ATP7AQ04656 1500 aa23.78■■□□□ 1.4
SPDEF-201ENST00000374037 MRS2Q9HD23 443 aa23.78■■□□□ 1.4
SPDEF-201ENST00000374037 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
SPDEF-201ENST00000374037 PRDM15P57071 1507 aaPredicted RBP23.77■■□□□ 1.4
SPDEF-201ENST00000374037 VWDEQ8N2E2 1590 aa23.76■■□□□ 1.39
SPDEF-201ENST00000374037 SPHKAPQ2M3C7 1700 aa23.76■■□□□ 1.39
SPDEF-201ENST00000374037 TET3O43151 1660 aa23.75■■□□□ 1.39
SPDEF-201ENST00000374037 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
SPDEF-201ENST00000374037 CEP152O94986 1710 aa23.75■■□□□ 1.39
SPDEF-201ENST00000374037 RNF17Q9BXT8 1623 aaKnown RBP23.75■■□□□ 1.39
SPDEF-201ENST00000374037 TRPM2O94759 1503 aa23.74■■□□□ 1.39
SPDEF-201ENST00000374037 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
SPDEF-201ENST00000374037 PTPRTO14522 1441 aa23.71■■□□□ 1.39
SPDEF-201ENST00000374037 ZBED9Q6R2W3 1325 aa23.71■■□□□ 1.39
SPDEF-201ENST00000374037 ADGRL1O94910 1474 aa23.71■■□□□ 1.39
SPDEF-201ENST00000374037 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
SPDEF-201ENST00000374037 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
SPDEF-201ENST00000374037 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
SPDEF-201ENST00000374037 MROH1Q8NDA8 1641 aa23.68■■□□□ 1.38
SPDEF-201ENST00000374037 SCAPERQ9BY12 1400 aa23.67■■□□□ 1.38
SPDEF-201ENST00000374037 CLTCL1P53675 1640 aa23.67■■□□□ 1.38
SPDEF-201ENST00000374037 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
SPDEF-201ENST00000374037 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
SPDEF-201ENST00000374037 COL17A1Q9UMD9 1497 aaPredicted RBP23.65■■□□□ 1.38
SPDEF-201ENST00000374037 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
SPDEF-201ENST00000374037 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.37
SPDEF-201ENST00000374037 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
SPDEF-201ENST00000374037 CFAP74Q9C0B2 1584 aa23.62■■□□□ 1.37
SPDEF-201ENST00000374037 KANK1Q14678 1352 aa23.6■■□□□ 1.37
SPDEF-201ENST00000374037 TESK2Q96S53 571 aa23.6■■□□□ 1.37
SPDEF-201ENST00000374037 STAC3Q96MF2 364 aa23.57■■□□□ 1.36
SPDEF-201ENST00000374037 KIAA1210Q9ULL0 1709 aa23.57■■□□□ 1.36
SPDEF-201ENST00000374037 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
SPDEF-201ENST00000374037 RALBP1Q15311 655 aa23.56■■□□□ 1.36
SPDEF-201ENST00000374037 RBM19Q9Y4C8 960 aaKnown RBP23.56■■□□□ 1.36
SPDEF-201ENST00000374037 BRD4O60885 1362 aaPredicted RBP23.54■■□□□ 1.36
SPDEF-201ENST00000374037 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
SPDEF-201ENST00000374037 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
SPDEF-201ENST00000374037 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
SPDEF-201ENST00000374037 ANP32EQ9BTT0 268 aa23.54■■□□□ 1.36
SPDEF-201ENST00000374037 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
SPDEF-201ENST00000374037 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
SPDEF-201ENST00000374037 KIF3BO15066 747 aa23.53■■□□□ 1.36
SPDEF-201ENST00000374037 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
SPDEF-201ENST00000374037 PPP4R2Q9NY27 417 aa23.52■■□□□ 1.36
SPDEF-201ENST00000374037 KIF1BO60333 1816 aa23.52■■□□□ 1.36
SPDEF-201ENST00000374037 CD109Q6YHK3 1445 aa23.52■■□□□ 1.35
SPDEF-201ENST00000374037 PPRC1Q5VV67 1664 aaKnown RBP23.52■■□□□ 1.35
SPDEF-201ENST00000374037 LRPPRCP42704 1394 aaKnown RBP23.51■■□□□ 1.35
SPDEF-201ENST00000374037 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
SPDEF-201ENST00000374037 PER1O15534 1290 aaPredicted RBP23.51■■□□□ 1.35
SPDEF-201ENST00000374037 IFT172Q9UG01 1749 aa23.51■■□□□ 1.35
SPDEF-201ENST00000374037 POGZQ7Z3K3 1410 aa23.49■■□□□ 1.35
SPDEF-201ENST00000374037 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
SPDEF-201ENST00000374037 WASHC2CQ9Y4E1 1318 aa23.48■■□□□ 1.35
SPDEF-201ENST00000374037 MLH3Q9UHC1 1453 aa23.48■■□□□ 1.35
SPDEF-201ENST00000374037 TMC1Q8TDI8 760 aa23.47■■□□□ 1.35
SPDEF-201ENST00000374037 TMF1P82094 1093 aa23.47■■□□□ 1.35
SPDEF-201ENST00000374037 HECW2Q9P2P5 1572 aa23.47■■□□□ 1.35
SPDEF-201ENST00000374037 FRMPD1Q5SYB0 1578 aa23.46■■□□□ 1.35
SPDEF-201ENST00000374037 MAP3K4Q9Y6R4 1608 aa23.45■■□□□ 1.35
SPDEF-201ENST00000374037 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.35
SPDEF-201ENST00000374037 MYOM2P54296 1465 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms