RNA–Protein interactions for RNA: ENST00000374037.7

SPDEF-201, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPDEF, Length 1,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-201ENST00000374037 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
SPDEF-201ENST00000374037 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
SPDEF-201ENST00000374037 ZCCHC6Q5VYS8 1495 aaKnown RBP31.51■■■□□ 2.64
SPDEF-201ENST00000374037 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
SPDEF-201ENST00000374037 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
SPDEF-201ENST00000374037 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
SPDEF-201ENST00000374037 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
SPDEF-201ENST00000374037 ABCC9O60706 1549 aa30.19■■■□□ 2.42
SPDEF-201ENST00000374037 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
SPDEF-201ENST00000374037 SCRIBQ14160 1630 aa29.72■■■□□ 2.35
SPDEF-201ENST00000374037 NACADO15069 1562 aa29.71■■■□□ 2.35
SPDEF-201ENST00000374037 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
SPDEF-201ENST00000374037 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
SPDEF-201ENST00000374037 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
SPDEF-201ENST00000374037 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
SPDEF-201ENST00000374037 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
SPDEF-201ENST00000374037 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
SPDEF-201ENST00000374037 WIZO95785 1651 aa28.74■■■□□ 2.19
SPDEF-201ENST00000374037 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
SPDEF-201ENST00000374037 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
SPDEF-201ENST00000374037 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SPDEF-201ENST00000374037 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
SPDEF-201ENST00000374037 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
SPDEF-201ENST00000374037 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
SPDEF-201ENST00000374037 LOC105371045A0A1W2PR82 267 aa28.35■■■□□ 2.13
SPDEF-201ENST00000374037 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
SPDEF-201ENST00000374037 HRCP23327 699 aa28.19■■■□□ 2.1
SPDEF-201ENST00000374037 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
SPDEF-201ENST00000374037 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
SPDEF-201ENST00000374037 PEG3Q9GZU2 1588 aa28.13■■■□□ 2.09
SPDEF-201ENST00000374037 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
SPDEF-201ENST00000374037 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
SPDEF-201ENST00000374037 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
SPDEF-201ENST00000374037 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
SPDEF-201ENST00000374037 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
SPDEF-201ENST00000374037 TRIM26Q12899 539 aaPredicted RBP27.68■■■□□ 2.02
SPDEF-201ENST00000374037 EEA1Q15075 1411 aa27.5■■□□□ 1.99
SPDEF-201ENST00000374037 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
SPDEF-201ENST00000374037 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
SPDEF-201ENST00000374037 SOGA1O94964 1423 aa27.46■■□□□ 1.99
SPDEF-201ENST00000374037 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
SPDEF-201ENST00000374037 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
SPDEF-201ENST00000374037 NCAPD3P42695 1498 aa27.42■■□□□ 1.98
SPDEF-201ENST00000374037 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
SPDEF-201ENST00000374037 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
SPDEF-201ENST00000374037 CSRNP3Q8WYN3 585 aa27.29■■□□□ 1.96
SPDEF-201ENST00000374037 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
SPDEF-201ENST00000374037 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
SPDEF-201ENST00000374037 ZEB1P37275 1124 aaPredicted RBP27.22■■□□□ 1.95
SPDEF-201ENST00000374037 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
SPDEF-201ENST00000374037 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.94
SPDEF-201ENST00000374037 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
SPDEF-201ENST00000374037 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
SPDEF-201ENST00000374037 KIF21BO75037 1637 aa27.18■■□□□ 1.94
SPDEF-201ENST00000374037 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
SPDEF-201ENST00000374037 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
SPDEF-201ENST00000374037 CFTRP13569 1480 aa27.05■■□□□ 1.92
SPDEF-201ENST00000374037 UBTFP17480 764 aaKnown RBP26.99■■□□□ 1.91
SPDEF-201ENST00000374037 CUX1P39880 1505 aa26.96■■□□□ 1.91
SPDEF-201ENST00000374037 RAPGEF2Q9Y4G8 1499 aa26.86■■□□□ 1.89
SPDEF-201ENST00000374037 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
SPDEF-201ENST00000374037 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
SPDEF-201ENST00000374037 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
SPDEF-201ENST00000374037 CLIP1P30622 1438 aa26.78■■□□□ 1.88
SPDEF-201ENST00000374037 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
SPDEF-201ENST00000374037 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
SPDEF-201ENST00000374037 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
SPDEF-201ENST00000374037 TTBK1Q5TCY1 1321 aaPredicted RBP26.52■■□□□ 1.84
SPDEF-201ENST00000374037 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
SPDEF-201ENST00000374037 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
SPDEF-201ENST00000374037 ARAP1Q96P48 1450 aa26.48■■□□□ 1.83
SPDEF-201ENST00000374037 CUX2O14529 1486 aa26.47■■□□□ 1.83
SPDEF-201ENST00000374037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.83
SPDEF-201ENST00000374037 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
SPDEF-201ENST00000374037 NESP48681 1621 aa26.43■■□□□ 1.82
SPDEF-201ENST00000374037 DNMBPQ6XZF7 1577 aa26.43■■□□□ 1.82
SPDEF-201ENST00000374037 IGF1RP08069 1367 aa26.42■■□□□ 1.82
SPDEF-201ENST00000374037 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
SPDEF-201ENST00000374037 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
SPDEF-201ENST00000374037 APLP2Q06481 763 aa26.33■■□□□ 1.81
SPDEF-201ENST00000374037 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
SPDEF-201ENST00000374037 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
SPDEF-201ENST00000374037 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
SPDEF-201ENST00000374037 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
SPDEF-201ENST00000374037 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
SPDEF-201ENST00000374037 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
SPDEF-201ENST00000374037 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.79
SPDEF-201ENST00000374037 WDR97A6NE52 1622 aa26.2■■□□□ 1.79
SPDEF-201ENST00000374037 URB2Q14146 1524 aaKnown RBP26.16■■□□□ 1.78
SPDEF-201ENST00000374037 CUL7Q14999 1698 aa26.15■■□□□ 1.78
SPDEF-201ENST00000374037 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
SPDEF-201ENST00000374037 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.77
SPDEF-201ENST00000374037 MAP3K1Q13233 1512 aa26.08■■□□□ 1.77
SPDEF-201ENST00000374037 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
SPDEF-201ENST00000374037 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
SPDEF-201ENST00000374037 CTTNBP2Q8WZ74 1663 aa26.04■■□□□ 1.76
SPDEF-201ENST00000374037 RRBP1Q9P2E9 1410 aaKnown RBP26.03■■□□□ 1.76
SPDEF-201ENST00000374037 TIAM1Q13009 1591 aa26■■□□□ 1.75
SPDEF-201ENST00000374037 EFCAB5A4FU69 1503 aa25.96■■□□□ 1.75
SPDEF-201ENST00000374037 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms