RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
TRAPPC3-202ENST00000373162 DNMT1P26358 1616 aaKnown RBP28.29■■■□□ 2.12
TRAPPC3-202ENST00000373162 MROH1Q8NDA8 1641 aa28.29■■■□□ 2.12
TRAPPC3-202ENST00000373162 ABCC5O15440 1437 aa28.28■■■□□ 2.12
TRAPPC3-202ENST00000373162 TSPY4P0CV99 314 aa28.28■■■□□ 2.12
TRAPPC3-202ENST00000373162 TSPY10P0CW01 314 aa28.28■■■□□ 2.12
TRAPPC3-202ENST00000373162 KIF3BO15066 747 aa28.25■■■□□ 2.11
TRAPPC3-202ENST00000373162 APLP2Q06481 763 aa28.24■■■□□ 2.11
TRAPPC3-202ENST00000373162 DAPK1P53355 1430 aa28.22■■■□□ 2.11
TRAPPC3-202ENST00000373162 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
TRAPPC3-202ENST00000373162 PZPP20742 1482 aa28.21■■■□□ 2.11
TRAPPC3-202ENST00000373162 CEP170BQ9Y4F5 1589 aaPredicted RBP28.21■■■□□ 2.11
TRAPPC3-202ENST00000373162 DUOX2Q9NRD8 1548 aa28.21■■■□□ 2.11
TRAPPC3-202ENST00000373162 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
TRAPPC3-202ENST00000373162 ABCC3O15438 1527 aa28.18■■■□□ 2.1
TRAPPC3-202ENST00000373162 PTPRTO14522 1441 aa28.18■■■□□ 2.1
TRAPPC3-202ENST00000373162 CAMSAP1Q5T5Y3 1602 aa28.17■■■□□ 2.1
TRAPPC3-202ENST00000373162 PLA2R1Q13018 1463 aa28.14■■■□□ 2.09
TRAPPC3-202ENST00000373162 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC3-202ENST00000373162 DEPDC5O75140 1603 aa28.13■■■□□ 2.09
TRAPPC3-202ENST00000373162 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
TRAPPC3-202ENST00000373162 ERBINQ96RT1 1412 aa28.12■■■□□ 2.09
TRAPPC3-202ENST00000373162 A2ML1A8K2U0 1454 aa28.12■■■□□ 2.09
TRAPPC3-202ENST00000373162 ADGRL2O95490 1459 aa28.1■■■□□ 2.09
TRAPPC3-202ENST00000373162 CEP152O94986 1710 aa28.09■■■□□ 2.09
TRAPPC3-202ENST00000373162 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
TRAPPC3-202ENST00000373162 WASHC2CQ9Y4E1 1318 aa28.08■■■□□ 2.09
TRAPPC3-202ENST00000373162 FBXO31Q5XUX0 539 aaPredicted RBP28.07■■■□□ 2.08
TRAPPC3-202ENST00000373162 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
TRAPPC3-202ENST00000373162 TNRQ92752 1358 aa28.07■■■□□ 2.08
TRAPPC3-202ENST00000373162 VWDEQ8N2E2 1590 aa28.03■■■□□ 2.08
TRAPPC3-202ENST00000373162 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
TRAPPC3-202ENST00000373162 LTBP4Q8N2S1 1624 aa28.03■■■□□ 2.08
TRAPPC3-202ENST00000373162 ERVK-7P63135 1459 aa28.01■■■□□ 2.07
TRAPPC3-202ENST00000373162 NLRP1Q9C000 1473 aa28.01■■■□□ 2.07
TRAPPC3-202ENST00000373162 ARHGAP31Q2M1Z3 1444 aa28■■■□□ 2.07
TRAPPC3-202ENST00000373162 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
TRAPPC3-202ENST00000373162 RRP7BPQ9NSQ0 103 aa27.99■■■□□ 2.07
TRAPPC3-202ENST00000373162 NEURL4Q96JN8 1562 aa27.98■■■□□ 2.07
TRAPPC3-202ENST00000373162 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
TRAPPC3-202ENST00000373162 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.07
TRAPPC3-202ENST00000373162 NCKAP5LQ9HCH0 1330 aa27.94■■■□□ 2.06
TRAPPC3-202ENST00000373162 PKD2Q13563 968 aa27.94■■■□□ 2.06
TRAPPC3-202ENST00000373162 CHIC2Q9UKJ5 165 aa27.92■■■□□ 2.06
TRAPPC3-202ENST00000373162 UGGT1Q9NYU2 1555 aa27.91■■■□□ 2.06
TRAPPC3-202ENST00000373162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
TRAPPC3-202ENST00000373162 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
TRAPPC3-202ENST00000373162 UBR1Q8IWV7 1749 aa27.87■■■□□ 2.05
TRAPPC3-202ENST00000373162 IQSEC2Q5JU85 1478 aa27.86■■■□□ 2.05
TRAPPC3-202ENST00000373162 MED14O60244 1454 aa27.85■■■□□ 2.05
TRAPPC3-202ENST00000373162 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
TRAPPC3-202ENST00000373162 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
TRAPPC3-202ENST00000373162 CFAP65Q6ZU64 1925 aaKnown RBP27.83■■■□□ 2.05
TRAPPC3-202ENST00000373162 ROCK1Q13464 1354 aa27.83■■■□□ 2.05
TRAPPC3-202ENST00000373162 UNC13BO14795 1591 aa27.82■■■□□ 2.04
TRAPPC3-202ENST00000373162 KANK1Q14678 1352 aa27.8■■■□□ 2.04
TRAPPC3-202ENST00000373162 SYNMO15061 1565 aa27.8■■■□□ 2.04
TRAPPC3-202ENST00000373162 ZNF335Q9H4Z2 1342 aaPredicted RBP27.79■■■□□ 2.04
TRAPPC3-202ENST00000373162 ARHGAP23Q9P227 1491 aa27.78■■■□□ 2.04
TRAPPC3-202ENST00000373162 NOS1P29475 1434 aa27.78■■■□□ 2.04
TRAPPC3-202ENST00000373162 THEMISQ8N1K5 641 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC3-202ENST00000373162 KDM5AP29375 1690 aaKnown RBP27.77■■■□□ 2.04
TRAPPC3-202ENST00000373162 PIK3C2BO00750 1634 aa27.77■■■□□ 2.04
TRAPPC3-202ENST00000373162 SLIT1O75093 1534 aa27.77■■■□□ 2.04
TRAPPC3-202ENST00000373162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.76■■■□□ 2.03
TRAPPC3-202ENST00000373162 RRBP1Q9P2E9 1410 aaKnown RBP27.75■■■□□ 2.03
TRAPPC3-202ENST00000373162 TET3O43151 1660 aa27.75■■■□□ 2.03
TRAPPC3-202ENST00000373162 IQGAP1P46940 1657 aa27.73■■■□□ 2.03
TRAPPC3-202ENST00000373162 NPHP4O75161 1426 aaPredicted RBP27.73■■■□□ 2.03
TRAPPC3-202ENST00000373162 RPRD2Q5VT52 1461 aaKnown RBP27.72■■■□□ 2.03
TRAPPC3-202ENST00000373162 ANKLE2Q86XL3 938 aa27.71■■■□□ 2.03
TRAPPC3-202ENST00000373162 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
TRAPPC3-202ENST00000373162 GCC2Q8IWJ2 1684 aa27.71■■■□□ 2.03
TRAPPC3-202ENST00000373162 IQGAP3Q86VI3 1631 aa27.69■■■□□ 2.02
TRAPPC3-202ENST00000373162 SCAF11Q99590 1463 aaKnown RBP27.66■■■□□ 2.02
TRAPPC3-202ENST00000373162 CPS1P31327 1500 aa27.65■■■□□ 2.02
TRAPPC3-202ENST00000373162 ADGRB3O60242 1522 aa27.64■■■□□ 2.02
TRAPPC3-202ENST00000373162 STRCP1A6NGW2 1772 aa27.63■■■□□ 2.01
TRAPPC3-202ENST00000373162 E9PCH4 1651 aa27.63■■■□□ 2.01
TRAPPC3-202ENST00000373162 IDI1Q13907 227 aa27.62■■■□□ 2.01
TRAPPC3-202ENST00000373162 TMEM2Q9UHN6 1383 aa27.6■■■□□ 2.01
TRAPPC3-202ENST00000373162 LTKP29376 864 aa27.6■■■□□ 2.01
TRAPPC3-202ENST00000373162 TMEM131LA2VDJ0 1609 aa27.54■■■□□ 2
TRAPPC3-202ENST00000373162 SLC52A1Q9NWF4 448 aa27.54■■■□□ 2
TRAPPC3-202ENST00000373162 MYO5BQ9ULV0 1848 aa27.53■■■□□ 2
TRAPPC3-202ENST00000373162 ALKQ9UM73 1620 aa27.52■■■□□ 2
TRAPPC3-202ENST00000373162 NAIPQ13075 1403 aa27.51■■□□□ 1.99
TRAPPC3-202ENST00000373162 ITGAEP38570 1179 aa27.51■■□□□ 1.99
TRAPPC3-202ENST00000373162 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
TRAPPC3-202ENST00000373162 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
TRAPPC3-202ENST00000373162 NUP155O75694 1391 aa27.48■■□□□ 1.99
TRAPPC3-202ENST00000373162 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
TRAPPC3-202ENST00000373162 ILDR2Q71H61 639 aa27.48■■□□□ 1.99
TRAPPC3-202ENST00000373162 DISP3Q9P2K9 1392 aa27.48■■□□□ 1.99
TRAPPC3-202ENST00000373162 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
TRAPPC3-202ENST00000373162 EID1Q9Y6B2 187 aa27.43■■□□□ 1.98
TRAPPC3-202ENST00000373162 XIRP1Q702N8 1843 aaKnown RBP27.43■■□□□ 1.98
TRAPPC3-202ENST00000373162 SPHKAPQ2M3C7 1700 aa27.41■■□□□ 1.98
TRAPPC3-202ENST00000373162 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
TRAPPC3-202ENST00000373162 STAG3Q9UJ98 1225 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms