RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 NISCHQ9Y2I1 1504 aa44.96■■■■■ 4.79
TRAPPC3-202ENST00000373162 CCDC180Q9P1Z9 1646 aa40.22■■■■■ 4.03
TRAPPC3-202ENST00000373162 ABCC9O60706 1549 aa39.62■■■■□ 3.93
TRAPPC3-202ENST00000373162 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
TRAPPC3-202ENST00000373162 NACADO15069 1562 aa37.86■■■■□ 3.65
TRAPPC3-202ENST00000373162 MYO15BQ96JP2 1530 aa37.6■■■■□ 3.61
TRAPPC3-202ENST00000373162 ZCCHC6Q5VYS8 1495 aaKnown RBP37.41■■■■□ 3.58
TRAPPC3-202ENST00000373162 DCAF8L2P0C7V8 631 aa37.34■■■■□ 3.57
TRAPPC3-202ENST00000373162 DCAF1Q9Y4B6 1507 aa37.26■■■■□ 3.55
TRAPPC3-202ENST00000373162 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
TRAPPC3-202ENST00000373162 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
TRAPPC3-202ENST00000373162 BICRAQ9NZM4 1560 aa36.98■■■■□ 3.51
TRAPPC3-202ENST00000373162 PABPN1Q86U42 306 aaKnown RBP eCLIP36.86■■■■□ 3.49
TRAPPC3-202ENST00000373162 SCRIBQ14160 1630 aa36.54■■■■□ 3.44
TRAPPC3-202ENST00000373162 SHROOM4Q9ULL8 1493 aa36.52■■■■□ 3.44
TRAPPC3-202ENST00000373162 EIF4G1Q04637 1599 aaKnown RBP35.95■■■■□ 3.35
TRAPPC3-202ENST00000373162 CC2D2AQ9P2K1 1620 aa35.89■■■■□ 3.34
TRAPPC3-202ENST00000373162 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
TRAPPC3-202ENST00000373162 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
TRAPPC3-202ENST00000373162 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
TRAPPC3-202ENST00000373162 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
TRAPPC3-202ENST00000373162 BAZ1AQ9NRL2 1556 aaPredicted RBP34.85■■■■□ 3.17
TRAPPC3-202ENST00000373162 SMARCA2P51531 1590 aa34.79■■■■□ 3.16
TRAPPC3-202ENST00000373162 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
TRAPPC3-202ENST00000373162 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
TRAPPC3-202ENST00000373162 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
TRAPPC3-202ENST00000373162 BAZ1BQ9UIG0 1483 aaKnown RBP34.51■■■■□ 3.11
TRAPPC3-202ENST00000373162 WIZO95785 1651 aa34.22■■■■□ 3.07
TRAPPC3-202ENST00000373162 NESP48681 1621 aa34.22■■■■□ 3.07
TRAPPC3-202ENST00000373162 ERCC6Q03468 1493 aa34.08■■■■□ 3.05
TRAPPC3-202ENST00000373162 LAMC3Q9Y6N6 1575 aa34.08■■■■□ 3.05
TRAPPC3-202ENST00000373162 RSF1Q96T23 1441 aaPredicted RBP34.07■■■■□ 3.04
TRAPPC3-202ENST00000373162 CUX2O14529 1486 aa34.04■■■■□ 3.04
TRAPPC3-202ENST00000373162 DNAJC5Q9H3Z4 198 aa34.03■■■■□ 3.04
TRAPPC3-202ENST00000373162 THOC2Q8NI27 1593 aaKnown RBP33.89■■■■□ 3.02
TRAPPC3-202ENST00000373162 TOP2AP11388 1531 aaKnown RBP33.86■■■■□ 3.01
TRAPPC3-202ENST00000373162 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
TRAPPC3-202ENST00000373162 KIF21AQ7Z4S6 1674 aa33.83■■■■□ 3.01
TRAPPC3-202ENST00000373162 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
TRAPPC3-202ENST00000373162 CFTRP13569 1480 aa33.62■■■□□ 2.97
TRAPPC3-202ENST00000373162 MRC2Q9UBG0 1479 aa33.51■■■□□ 2.96
TRAPPC3-202ENST00000373162 WDR62O43379 1518 aa33.49■■■□□ 2.95
TRAPPC3-202ENST00000373162 FANCD2Q9BXW9 1451 aa33.45■■■□□ 2.95
TRAPPC3-202ENST00000373162 CEP164Q9UPV0 1460 aa33.44■■■□□ 2.94
TRAPPC3-202ENST00000373162 CCDC88BA6NC98 1476 aa33.43■■■□□ 2.94
TRAPPC3-202ENST00000373162 PRDM2Q13029 1718 aa33.36■■■□□ 2.93
TRAPPC3-202ENST00000373162 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
TRAPPC3-202ENST00000373162 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
TRAPPC3-202ENST00000373162 DNMBPQ6XZF7 1577 aa32.84■■■□□ 2.85
TRAPPC3-202ENST00000373162 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
TRAPPC3-202ENST00000373162 IFT140Q96RY7 1462 aa32.78■■■□□ 2.84
TRAPPC3-202ENST00000373162 ZNF608Q9ULD9 1512 aaPredicted RBP32.71■■■□□ 2.83
TRAPPC3-202ENST00000373162 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
TRAPPC3-202ENST00000373162 POLA1P09884 1462 aaPredicted RBP32.61■■■□□ 2.81
TRAPPC3-202ENST00000373162 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
TRAPPC3-202ENST00000373162 EIF4G3O43432 1585 aaKnown RBP32.58■■■□□ 2.81
TRAPPC3-202ENST00000373162 CUX1P39880 1505 aa32.53■■■□□ 2.8
TRAPPC3-202ENST00000373162 FGD5Q6ZNL6 1462 aa32.44■■■□□ 2.78
TRAPPC3-202ENST00000373162 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
TRAPPC3-202ENST00000373162 AQRO60306 1485 aaKnown RBP eCLIP32.4■■■□□ 2.785e-8■■■■■ 40.7
TRAPPC3-202ENST00000373162 OSCARQ8IYS5 282 aa32.39■■■□□ 2.78
TRAPPC3-202ENST00000373162 SOGA1O94964 1423 aa32.37■■■□□ 2.77
TRAPPC3-202ENST00000373162 WDR97A6NE52 1622 aa32.36■■■□□ 2.77
TRAPPC3-202ENST00000373162 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
TRAPPC3-202ENST00000373162 TDRD9Q8NDG6 1382 aaKnown RBP32.24■■■□□ 2.75
TRAPPC3-202ENST00000373162 CHD1O14646 1710 aa32.23■■■□□ 2.75
TRAPPC3-202ENST00000373162 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
TRAPPC3-202ENST00000373162 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
TRAPPC3-202ENST00000373162 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
TRAPPC3-202ENST00000373162 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
TRAPPC3-202ENST00000373162 ABCA5Q8WWZ7 1642 aa32.11■■■□□ 2.73
TRAPPC3-202ENST00000373162 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
TRAPPC3-202ENST00000373162 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
TRAPPC3-202ENST00000373162 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
TRAPPC3-202ENST00000373162 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
TRAPPC3-202ENST00000373162 GRIN2BQ13224 1484 aa32.09■■■□□ 2.73
TRAPPC3-202ENST00000373162 MAGI1Q96QZ7 1491 aaPredicted RBP32.08■■■□□ 2.73
TRAPPC3-202ENST00000373162 WRNQ14191 1432 aaPredicted RBP eCLIP32.07■■■□□ 2.72
TRAPPC3-202ENST00000373162 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
TRAPPC3-202ENST00000373162 ARHGEF11O15085 1522 aa32.03■■■□□ 2.72
TRAPPC3-202ENST00000373162 GAPVD1Q14C86 1478 aa32.02■■■□□ 2.72
TRAPPC3-202ENST00000373162 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
TRAPPC3-202ENST00000373162 SYNJ2O15056 1496 aa31.95■■■□□ 2.7
TRAPPC3-202ENST00000373162 FBLN2P98095 1184 aa31.87■■■□□ 2.69
TRAPPC3-202ENST00000373162 ADAMTS12P58397 1594 aa31.8■■■□□ 2.68
TRAPPC3-202ENST00000373162 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
TRAPPC3-202ENST00000373162 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
TRAPPC3-202ENST00000373162 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
TRAPPC3-202ENST00000373162 GRIN2AQ12879 1464 aa31.71■■■□□ 2.67
TRAPPC3-202ENST00000373162 FHAD1B1AJZ9 1412 aa31.65■■■□□ 2.66
TRAPPC3-202ENST00000373162 NUP160Q12769 1436 aa31.65■■■□□ 2.66
TRAPPC3-202ENST00000373162 CEP170Q5SW79 1584 aa31.61■■■□□ 2.65
TRAPPC3-202ENST00000373162 CYB5RLQ6IPT4 315 aa31.56■■■□□ 2.64
TRAPPC3-202ENST00000373162 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
TRAPPC3-202ENST00000373162 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
TRAPPC3-202ENST00000373162 KIF27Q86VH2 1401 aa31.4■■■□□ 2.62
TRAPPC3-202ENST00000373162 IGF1RP08069 1367 aa31.39■■■□□ 2.62
TRAPPC3-202ENST00000373162 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
TRAPPC3-202ENST00000373162 CUL7Q14999 1698 aa31.35■■■□□ 2.61
TRAPPC3-202ENST00000373162 PRG4Q92954 1404 aaPredicted RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms