RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 IQSEC2Q5JU85 1478 aa15.98■□□□□ 0.15
COL5A1-202ENST00000371820 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
COL5A1-202ENST00000371820 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
COL5A1-202ENST00000371820 KANK4Q5T7N3 995 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-202ENST00000371820 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
COL5A1-202ENST00000371820 TSPY4P0CV99 314 aa15.96■□□□□ 0.15
COL5A1-202ENST00000371820 TSPY10P0CW01 314 aa15.96■□□□□ 0.15
COL5A1-202ENST00000371820 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-202ENST00000371820 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
COL5A1-202ENST00000371820 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
COL5A1-202ENST00000371820 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
COL5A1-202ENST00000371820 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
COL5A1-202ENST00000371820 PZPP20742 1482 aa15.93■□□□□ 0.14
COL5A1-202ENST00000371820 PKD2Q13563 968 aa15.93■□□□□ 0.14
COL5A1-202ENST00000371820 KIF3BO15066 747 aa15.92■□□□□ 0.14
COL5A1-202ENST00000371820 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
COL5A1-202ENST00000371820 TNRQ92752 1358 aa15.9■□□□□ 0.14
COL5A1-202ENST00000371820 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-202ENST00000371820 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
COL5A1-202ENST00000371820 POLR1AO95602 1720 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-202ENST00000371820 PTPN23Q9H3S7 1636 aa15.88■□□□□ 0.13
COL5A1-202ENST00000371820 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-202ENST00000371820 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
COL5A1-202ENST00000371820 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
COL5A1-202ENST00000371820 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-202ENST00000371820 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
COL5A1-202ENST00000371820 WASHC2CQ9Y4E1 1318 aa15.86■□□□□ 0.13
COL5A1-202ENST00000371820 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
COL5A1-202ENST00000371820 NLRP1Q9C000 1473 aa15.85■□□□□ 0.13
COL5A1-202ENST00000371820 SHANK2Q9UPX8 1470 aa15.85■□□□□ 0.13
COL5A1-202ENST00000371820 ABCC3O15438 1527 aa15.84■□□□□ 0.13
COL5A1-202ENST00000371820 MROH1Q8NDA8 1641 aa15.84■□□□□ 0.13
COL5A1-202ENST00000371820 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
COL5A1-202ENST00000371820 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.13
COL5A1-202ENST00000371820 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
COL5A1-202ENST00000371820 UGGT1Q9NYU2 1555 aa15.82■□□□□ 0.12
COL5A1-202ENST00000371820 DUOX2Q9NRD8 1548 aa15.81■□□□□ 0.12
COL5A1-202ENST00000371820 DEPDC5O75140 1603 aa15.8■□□□□ 0.12
COL5A1-202ENST00000371820 DAPK1P53355 1430 aa15.8■□□□□ 0.12
COL5A1-202ENST00000371820 CPS1P31327 1500 aa15.79■□□□□ 0.12
COL5A1-202ENST00000371820 ABCC5O15440 1437 aa15.79■□□□□ 0.12
COL5A1-202ENST00000371820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL5A1-202ENST00000371820 MED14O60244 1454 aa15.78■□□□□ 0.12
COL5A1-202ENST00000371820 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
COL5A1-202ENST00000371820 CEP152O94986 1710 aa15.78■□□□□ 0.12
COL5A1-202ENST00000371820 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
COL5A1-202ENST00000371820 THEMISQ8N1K5 641 aaPredicted RBP15.77■□□□□ 0.12
COL5A1-202ENST00000371820 VWDEQ8N2E2 1590 aa15.77■□□□□ 0.11
COL5A1-202ENST00000371820 PRDM15P57071 1507 aaPredicted RBP15.77■□□□□ 0.11
COL5A1-202ENST00000371820 ERBINQ96RT1 1412 aa15.77■□□□□ 0.11
COL5A1-202ENST00000371820 KIF15Q9NS87 1388 aa15.76■□□□□ 0.11
COL5A1-202ENST00000371820 ANKLE2Q86XL3 938 aa15.76■□□□□ 0.11
COL5A1-202ENST00000371820 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
COL5A1-202ENST00000371820 NPHP4O75161 1426 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-202ENST00000371820 ANKRD30AQ9BXX3 1397 aa15.75■□□□□ 0.11
COL5A1-202ENST00000371820 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
COL5A1-202ENST00000371820 UBR1Q8IWV7 1749 aa15.73■□□□□ 0.11
COL5A1-202ENST00000371820 ARHGAP31Q2M1Z3 1444 aa15.72■□□□□ 0.11
COL5A1-202ENST00000371820 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
COL5A1-202ENST00000371820 RRP7BPQ9NSQ0 103 aa15.71■□□□□ 0.11
COL5A1-202ENST00000371820 ADGRL2O95490 1459 aa15.71■□□□□ 0.1
COL5A1-202ENST00000371820 KANK1Q14678 1352 aa15.69■□□□□ 0.1
COL5A1-202ENST00000371820 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
COL5A1-202ENST00000371820 SYNMO15061 1565 aa15.68■□□□□ 0.1
COL5A1-202ENST00000371820 ARHGAP23Q9P227 1491 aa15.68■□□□□ 0.1
COL5A1-202ENST00000371820 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
COL5A1-202ENST00000371820 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
COL5A1-202ENST00000371820 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
COL5A1-202ENST00000371820 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
COL5A1-202ENST00000371820 SLIT1O75093 1534 aa15.67■□□□□ 0.1
COL5A1-202ENST00000371820 SOCS7O14512 581 aa15.66■□□□□ 0.1
COL5A1-202ENST00000371820 TOM1O60784 492 aa15.66■□□□□ 0.1
COL5A1-202ENST00000371820 LMTK2Q8IWU2 1503 aa15.66■□□□□ 0.1
COL5A1-202ENST00000371820 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
COL5A1-202ENST00000371820 LRRC7Q96NW7 1537 aa15.64■□□□□ 0.09
COL5A1-202ENST00000371820 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
COL5A1-202ENST00000371820 HSPA1LP34931 641 aa15.63■□□□□ 0.09
COL5A1-202ENST00000371820 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
COL5A1-202ENST00000371820 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
COL5A1-202ENST00000371820 ANKRD50Q9ULJ7 1429 aa15.62■□□□□ 0.09
COL5A1-202ENST00000371820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL5A1-202ENST00000371820 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
COL5A1-202ENST00000371820 MED1Q15648 1581 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-202ENST00000371820 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
COL5A1-202ENST00000371820 LTKP29376 864 aa15.6■□□□□ 0.09
COL5A1-202ENST00000371820 TMEM2Q9UHN6 1383 aa15.59■□□□□ 0.09
COL5A1-202ENST00000371820 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
COL5A1-202ENST00000371820 NOS1P29475 1434 aa15.58■□□□□ 0.08
COL5A1-202ENST00000371820 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
COL5A1-202ENST00000371820 EID1Q9Y6B2 187 aa15.56■□□□□ 0.08
COL5A1-202ENST00000371820 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
COL5A1-202ENST00000371820 XIRP1Q702N8 1843 aaKnown RBP15.55■□□□□ 0.08
COL5A1-202ENST00000371820 UNC13BO14795 1591 aa15.55■□□□□ 0.08
COL5A1-202ENST00000371820 RPRD2Q5VT52 1461 aaKnown RBP15.54■□□□□ 0.08
COL5A1-202ENST00000371820 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
COL5A1-202ENST00000371820 IDI1Q13907 227 aa15.54■□□□□ 0.08
COL5A1-202ENST00000371820 ITGAEP38570 1179 aa15.53■□□□□ 0.08
COL5A1-202ENST00000371820 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
COL5A1-202ENST00000371820 TET3O43151 1660 aa15.53■□□□□ 0.08
COL5A1-202ENST00000371820 GCC2Q8IWJ2 1684 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms