RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
LRRC42-202ENST00000371368 FAM135AQ9P2D6 1515 aa26.65■■□□□ 1.86
LRRC42-202ENST00000371368 FBXO31Q5XUX0 539 aaPredicted RBP26.65■■□□□ 1.86
LRRC42-202ENST00000371368 FGD6Q6ZV73 1430 aa26.65■■□□□ 1.86
LRRC42-202ENST00000371368 CAMSAP1Q5T5Y3 1602 aa26.64■■□□□ 1.85
LRRC42-202ENST00000371368 MYO3AQ8NEV4 1616 aa26.64■■□□□ 1.85
LRRC42-202ENST00000371368 ABCC5O15440 1437 aa26.64■■□□□ 1.85
LRRC42-202ENST00000371368 ZNF142P52746 1687 aaPredicted RBP26.61■■□□□ 1.85
LRRC42-202ENST00000371368 CEP170BQ9Y4F5 1589 aaPredicted RBP26.61■■□□□ 1.85
LRRC42-202ENST00000371368 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
LRRC42-202ENST00000371368 PZPP20742 1482 aa26.6■■□□□ 1.85
LRRC42-202ENST00000371368 NCKAP5LQ9HCH0 1330 aa26.6■■□□□ 1.85
LRRC42-202ENST00000371368 RNF17Q9BXT8 1623 aaKnown RBP26.59■■□□□ 1.85
LRRC42-202ENST00000371368 SHANK2Q9UPX8 1470 aa26.59■■□□□ 1.85
LRRC42-202ENST00000371368 DUOX2Q9NRD8 1548 aa26.59■■□□□ 1.85
LRRC42-202ENST00000371368 TNRQ92752 1358 aa26.58■■□□□ 1.85
LRRC42-202ENST00000371368 EIF2AK4Q9P2K8 1649 aaKnown RBP26.58■■□□□ 1.85
LRRC42-202ENST00000371368 DAPK1P53355 1430 aa26.58■■□□□ 1.85
LRRC42-202ENST00000371368 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
LRRC42-202ENST00000371368 KIF15Q9NS87 1388 aa26.57■■□□□ 1.84
LRRC42-202ENST00000371368 A2ML1A8K2U0 1454 aa26.56■■□□□ 1.84
LRRC42-202ENST00000371368 DNMT1P26358 1616 aaKnown RBP26.56■■□□□ 1.84
LRRC42-202ENST00000371368 CROCC2H7BZ55 1655 aa26.56■■□□□ 1.84
LRRC42-202ENST00000371368 PKD2Q13563 968 aa26.54■■□□□ 1.84
LRRC42-202ENST00000371368 PLA2R1Q13018 1463 aa26.54■■□□□ 1.84
LRRC42-202ENST00000371368 CHIC2Q9UKJ5 165 aa26.53■■□□□ 1.84
LRRC42-202ENST00000371368 ABCC3O15438 1527 aa26.53■■□□□ 1.84
LRRC42-202ENST00000371368 MROH1Q8NDA8 1641 aa26.51■■□□□ 1.83
LRRC42-202ENST00000371368 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
LRRC42-202ENST00000371368 ERBINQ96RT1 1412 aa26.49■■□□□ 1.83
LRRC42-202ENST00000371368 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
LRRC42-202ENST00000371368 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
LRRC42-202ENST00000371368 NLRP1Q9C000 1473 aa26.45■■□□□ 1.82
LRRC42-202ENST00000371368 THEMISQ8N1K5 641 aaPredicted RBP26.45■■□□□ 1.82
LRRC42-202ENST00000371368 LTBP4Q8N2S1 1624 aa26.44■■□□□ 1.82
LRRC42-202ENST00000371368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.44■■□□□ 1.82
LRRC42-202ENST00000371368 CEP152O94986 1710 aa26.44■■□□□ 1.82
LRRC42-202ENST00000371368 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
LRRC42-202ENST00000371368 PRDM15P57071 1507 aaPredicted RBP26.4■■□□□ 1.82
LRRC42-202ENST00000371368 ERVK-7P63135 1459 aa26.4■■□□□ 1.82
LRRC42-202ENST00000371368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
LRRC42-202ENST00000371368 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.81
LRRC42-202ENST00000371368 UGGT1Q9NYU2 1555 aa26.38■■□□□ 1.81
LRRC42-202ENST00000371368 KANK1Q14678 1352 aa26.38■■□□□ 1.81
LRRC42-202ENST00000371368 ANKLE2Q86XL3 938 aa26.38■■□□□ 1.81
LRRC42-202ENST00000371368 ADGRL2O95490 1459 aa26.37■■□□□ 1.81
LRRC42-202ENST00000371368 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
LRRC42-202ENST00000371368 ARHGAP31Q2M1Z3 1444 aa26.36■■□□□ 1.81
LRRC42-202ENST00000371368 CFAP65Q6ZU64 1925 aaKnown RBP26.35■■□□□ 1.81
LRRC42-202ENST00000371368 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
LRRC42-202ENST00000371368 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
LRRC42-202ENST00000371368 NEURL4Q96JN8 1562 aa26.32■■□□□ 1.8
LRRC42-202ENST00000371368 IQSEC2Q5JU85 1478 aa26.31■■□□□ 1.8
LRRC42-202ENST00000371368 VWDEQ8N2E2 1590 aa26.29■■□□□ 1.8
LRRC42-202ENST00000371368 LMTK2Q8IWU2 1503 aa26.28■■□□□ 1.8
LRRC42-202ENST00000371368 ANKRD50Q9ULJ7 1429 aa26.27■■□□□ 1.8
LRRC42-202ENST00000371368 MED14O60244 1454 aa26.26■■□□□ 1.79
LRRC42-202ENST00000371368 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
LRRC42-202ENST00000371368 UBR1Q8IWV7 1749 aa26.24■■□□□ 1.79
LRRC42-202ENST00000371368 ITGAEP38570 1179 aa26.19■■□□□ 1.78
LRRC42-202ENST00000371368 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
LRRC42-202ENST00000371368 IDI1Q13907 227 aa26.18■■□□□ 1.78
LRRC42-202ENST00000371368 EFCAB6Q5THR3 1501 aa26.18■■□□□ 1.78
LRRC42-202ENST00000371368 UBAP1LF5GYI3 381 aa26.17■■□□□ 1.78
LRRC42-202ENST00000371368 TXNDC2Q86VQ3 553 aa26.17■■□□□ 1.78
LRRC42-202ENST00000371368 STAG3Q9UJ98 1225 aa26.17■■□□□ 1.78
LRRC42-202ENST00000371368 IQGAP1P46940 1657 aa26.16■■□□□ 1.78
LRRC42-202ENST00000371368 LTKP29376 864 aa26.16■■□□□ 1.78
LRRC42-202ENST00000371368 PIK3C2BO00750 1634 aa26.16■■□□□ 1.78
LRRC42-202ENST00000371368 ARHGAP23Q9P227 1491 aa26.16■■□□□ 1.78
LRRC42-202ENST00000371368 NOS1P29475 1434 aa26.15■■□□□ 1.78
LRRC42-202ENST00000371368 CPS1P31327 1500 aa26.15■■□□□ 1.78
LRRC42-202ENST00000371368 SLIT1O75093 1534 aa26.14■■□□□ 1.78
LRRC42-202ENST00000371368 SYNMO15061 1565 aa26.13■■□□□ 1.77
LRRC42-202ENST00000371368 SCAF11Q99590 1463 aaKnown RBP26.13■■□□□ 1.77
LRRC42-202ENST00000371368 EID1Q9Y6B2 187 aa26.13■■□□□ 1.77
LRRC42-202ENST00000371368 SLC52A1Q9NWF4 448 aa26.11■■□□□ 1.77
LRRC42-202ENST00000371368 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
LRRC42-202ENST00000371368 UNC13BO14795 1591 aa26.1■■□□□ 1.77
LRRC42-202ENST00000371368 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
LRRC42-202ENST00000371368 TET3O43151 1660 aa26.09■■□□□ 1.77
LRRC42-202ENST00000371368 KDM5AP29375 1690 aaKnown RBP26.08■■□□□ 1.77
LRRC42-202ENST00000371368 GCC2Q8IWJ2 1684 aa26.04■■□□□ 1.76
LRRC42-202ENST00000371368 NUP155O75694 1391 aa26.03■■□□□ 1.76
LRRC42-202ENST00000371368 RRBP1Q9P2E9 1410 aaKnown RBP26.03■■□□□ 1.76
LRRC42-202ENST00000371368 TOM1O60784 492 aa26.02■■□□□ 1.76
LRRC42-202ENST00000371368 ADGRB3O60242 1522 aa26.02■■□□□ 1.76
LRRC42-202ENST00000371368 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
LRRC42-202ENST00000371368 IQGAP3Q86VI3 1631 aa26■■□□□ 1.75
LRRC42-202ENST00000371368 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
LRRC42-202ENST00000371368 E9PCH4 1651 aa25.98■■□□□ 1.75
LRRC42-202ENST00000371368 PIP4K2BP78356 416 aa25.97■■□□□ 1.75
LRRC42-202ENST00000371368 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
LRRC42-202ENST00000371368 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
LRRC42-202ENST00000371368 CHGAP10645 457 aaKnown RBP25.92■■□□□ 1.74
LRRC42-202ENST00000371368 HDGFP51858 240 aaKnown RBP25.92■■□□□ 1.74
LRRC42-202ENST00000371368 TMEM131LA2VDJ0 1609 aa25.92■■□□□ 1.74
LRRC42-202ENST00000371368 BCANQ96GW7 911 aa25.91■■□□□ 1.74
LRRC42-202ENST00000371368 MYO5BQ9ULV0 1848 aa25.9■■□□□ 1.74
LRRC42-202ENST00000371368 ZFYVE9O95405 1425 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms