RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 BACH2Q9BYV9 841 aa23.51■■□□□ 1.35
CHUK-201ENST00000370397 ABCA8O94911 1581 aa23.5■■□□□ 1.35
CHUK-201ENST00000370397 ST20-MTHFSA0A0A6YYL1 179 aa23.5■■□□□ 1.35
CHUK-201ENST00000370397 INSRP06213 1382 aa23.5■■□□□ 1.35
CHUK-201ENST00000370397 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
CHUK-201ENST00000370397 CNGB1Q14028 1251 aaPredicted RBP23.49■■□□□ 1.35
CHUK-201ENST00000370397 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
CHUK-201ENST00000370397 PER1O15534 1290 aaPredicted RBP23.48■■□□□ 1.35
CHUK-201ENST00000370397 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
CHUK-201ENST00000370397 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
CHUK-201ENST00000370397 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
CHUK-201ENST00000370397 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
CHUK-201ENST00000370397 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
CHUK-201ENST00000370397 PDE4AP27815 886 aa23.47■■□□□ 1.35
CHUK-201ENST00000370397 RCAN3Q9UKA8 241 aa23.47■■□□□ 1.35
CHUK-201ENST00000370397 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
CHUK-201ENST00000370397 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
CHUK-201ENST00000370397 MS4A1P11836 297 aa23.45■■□□□ 1.34
CHUK-201ENST00000370397 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
CHUK-201ENST00000370397 COL17A1Q9UMD9 1497 aaPredicted RBP23.44■■□□□ 1.34
CHUK-201ENST00000370397 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
CHUK-201ENST00000370397 CHD1O14646 1710 aa23.43■■□□□ 1.34
CHUK-201ENST00000370397 NUP155O75694 1391 aa23.43■■□□□ 1.34
CHUK-201ENST00000370397 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
CHUK-201ENST00000370397 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
CHUK-201ENST00000370397 WASHC2CQ9Y4E1 1318 aa23.41■■□□□ 1.34
CHUK-201ENST00000370397 NUP160Q12769 1436 aa23.4■■□□□ 1.34
CHUK-201ENST00000370397 CDC42BPBQ9Y5S2 1711 aa23.4■■□□□ 1.34
CHUK-201ENST00000370397 UNC13BO14795 1591 aa23.4■■□□□ 1.34
CHUK-201ENST00000370397 NLRP13Q86W25 1043 aa23.39■■□□□ 1.34
CHUK-201ENST00000370397 CDCA7LQ96GN5 454 aa23.39■■□□□ 1.33
CHUK-201ENST00000370397 PLA2R1Q13018 1463 aa23.39■■□□□ 1.33
CHUK-201ENST00000370397 RNF17Q9BXT8 1623 aaKnown RBP23.39■■□□□ 1.33
CHUK-201ENST00000370397 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
CHUK-201ENST00000370397 SAMD9LQ8IVG5 1584 aa23.36■■□□□ 1.33
CHUK-201ENST00000370397 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
CHUK-201ENST00000370397 A2MP01023 1474 aa23.35■■□□□ 1.33
CHUK-201ENST00000370397 RTL5Q5HYW3 569 aaPredicted RBP23.34■■□□□ 1.33
CHUK-201ENST00000370397 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
CHUK-201ENST00000370397 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.33
CHUK-201ENST00000370397 ATP10BO94823 1461 aa23.33■■□□□ 1.32
CHUK-201ENST00000370397 PREX2Q70Z35 1606 aa23.32■■□□□ 1.32
CHUK-201ENST00000370397 TESK2Q96S53 571 aa23.32■■□□□ 1.32
CHUK-201ENST00000370397 DISP3Q9P2K9 1392 aa23.32■■□□□ 1.32
CHUK-201ENST00000370397 SKAP1Q86WV1 359 aa23.32■■□□□ 1.32
CHUK-201ENST00000370397 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
CHUK-201ENST00000370397 CHMP7Q8WUX9 453 aaPredicted RBP23.31■■□□□ 1.32
CHUK-201ENST00000370397 VIRMAQ69YN4 1812 aaKnown RBP23.3■■□□□ 1.32
CHUK-201ENST00000370397 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
CHUK-201ENST00000370397 IQGAP3Q86VI3 1631 aa23.29■■□□□ 1.32
CHUK-201ENST00000370397 MAST1Q9Y2H9 1570 aa23.29■■□□□ 1.32
CHUK-201ENST00000370397 NPM2Q86SE8 214 aaKnown RBP23.28■■□□□ 1.32
CHUK-201ENST00000370397 PLIN1O60240 522 aa23.28■■□□□ 1.32
CHUK-201ENST00000370397 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
CHUK-201ENST00000370397 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
CHUK-201ENST00000370397 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.32
CHUK-201ENST00000370397 EIF2AK4Q9P2K8 1649 aaKnown RBP23.27■■□□□ 1.32
CHUK-201ENST00000370397 NEFMP07197 916 aa23.26■■□□□ 1.31
CHUK-201ENST00000370397 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
CHUK-201ENST00000370397 NBPF1Q3BBV0 1214 aa23.26■■□□□ 1.31
CHUK-201ENST00000370397 CRBNQ96SW2 442 aa23.25■■□□□ 1.31
CHUK-201ENST00000370397 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
CHUK-201ENST00000370397 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
CHUK-201ENST00000370397 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
CHUK-201ENST00000370397 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
CHUK-201ENST00000370397 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
CHUK-201ENST00000370397 MYOM1P52179 1685 aa23.22■■□□□ 1.31
CHUK-201ENST00000370397 ATP10AO60312 1499 aa23.22■■□□□ 1.31
CHUK-201ENST00000370397 ZNF521Q96K83 1311 aa23.22■■□□□ 1.31
CHUK-201ENST00000370397 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
CHUK-201ENST00000370397 PRKCSHP14314 528 aaPredicted RBP23.21■■□□□ 1.31
CHUK-201ENST00000370397 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
CHUK-201ENST00000370397 ERBINQ96RT1 1412 aa23.21■■□□□ 1.31
CHUK-201ENST00000370397 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
CHUK-201ENST00000370397 PLEKHH1Q9ULM0 1364 aa23.19■■□□□ 1.3
CHUK-201ENST00000370397 CCDC144AA2RUR9 1427 aa23.19■■□□□ 1.3
CHUK-201ENST00000370397 PPM1GO15355 546 aaPredicted RBP23.18■■□□□ 1.3
CHUK-201ENST00000370397 FBLN2P98095 1184 aa23.17■■□□□ 1.3
CHUK-201ENST00000370397 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
CHUK-201ENST00000370397 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
CHUK-201ENST00000370397 C8orf34Q49A92 452 aa23.15■■□□□ 1.3
CHUK-201ENST00000370397 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.29
CHUK-201ENST00000370397 DUSP27Q5VZP5 1158 aa23.13■■□□□ 1.29
CHUK-201ENST00000370397 PANK3Q9H999 370 aa23.13■■□□□ 1.29
CHUK-201ENST00000370397 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
CHUK-201ENST00000370397 SYNMO15061 1565 aa23.13■■□□□ 1.29
CHUK-201ENST00000370397 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
CHUK-201ENST00000370397 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CHUK-201ENST00000370397 NFKBIBQ15653 356 aa23.1■■□□□ 1.29
CHUK-201ENST00000370397 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
CHUK-201ENST00000370397 SPHKAPQ2M3C7 1700 aa23.1■■□□□ 1.29
CHUK-201ENST00000370397 ADAMTS8Q9UP79 889 aa23.09■■□□□ 1.29
CHUK-201ENST00000370397 TSPY4P0CV99 314 aa23.09■■□□□ 1.29
CHUK-201ENST00000370397 TSPY10P0CW01 314 aa23.09■■□□□ 1.29
CHUK-201ENST00000370397 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
CHUK-201ENST00000370397 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
CHUK-201ENST00000370397 ABCC2Q92887 1545 aa23.08■■□□□ 1.28
CHUK-201ENST00000370397 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
CHUK-201ENST00000370397 CENPQQ7L2Z9 268 aaPredicted RBP23.06■■□□□ 1.28
CHUK-201ENST00000370397 GSE1Q14687 1217 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms