RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 WASHC2CQ9Y4E1 1318 aa31.11■■■□□ 2.57
CEACAM3-201ENST00000344550 DUOX2Q9NRD8 1548 aa31.1■■■□□ 2.57
CEACAM3-201ENST00000344550 RNF17Q9BXT8 1623 aaKnown RBP31.08■■■□□ 2.57
CEACAM3-201ENST00000344550 DAPK1P53355 1430 aa31.07■■■□□ 2.57
CEACAM3-201ENST00000344550 DNMT1P26358 1616 aaKnown RBP31.06■■■□□ 2.56
CEACAM3-201ENST00000344550 PZPP20742 1482 aa31.05■■■□□ 2.56
CEACAM3-201ENST00000344550 CROCC2H7BZ55 1655 aa31.05■■■□□ 2.56
CEACAM3-201ENST00000344550 ILDR1Q86SU0 546 aaPredicted RBP31.04■■■□□ 2.56
CEACAM3-201ENST00000344550 KIF15Q9NS87 1388 aa31.04■■■□□ 2.56
CEACAM3-201ENST00000344550 ERBINQ96RT1 1412 aa31.03■■■□□ 2.56
CEACAM3-201ENST00000344550 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
CEACAM3-201ENST00000344550 PTPRTO14522 1441 aa31.02■■■□□ 2.56
CEACAM3-201ENST00000344550 ZNF142P52746 1687 aaPredicted RBP31■■■□□ 2.55
CEACAM3-201ENST00000344550 NCOA1Q15788 1441 aa31■■■□□ 2.55
CEACAM3-201ENST00000344550 ANKRD30AQ9BXX3 1397 aa31■■■□□ 2.55
CEACAM3-201ENST00000344550 ZC3H13Q5T200 1668 aaKnown RBP30.99■■■□□ 2.55
CEACAM3-201ENST00000344550 MYO3AQ8NEV4 1616 aa30.98■■■□□ 2.55
CEACAM3-201ENST00000344550 PLA2R1Q13018 1463 aa30.97■■■□□ 2.55
CEACAM3-201ENST00000344550 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
CEACAM3-201ENST00000344550 FBXO41Q8TF61 875 aa30.96■■■□□ 2.55
CEACAM3-201ENST00000344550 TNRQ92752 1358 aa30.95■■■□□ 2.55
CEACAM3-201ENST00000344550 RRP7BPQ9NSQ0 103 aa30.95■■■□□ 2.55
CEACAM3-201ENST00000344550 A2ML1A8K2U0 1454 aa30.95■■■□□ 2.54
CEACAM3-201ENST00000344550 ABCC3O15438 1527 aa30.94■■■□□ 2.54
CEACAM3-201ENST00000344550 CAMSAP1Q5T5Y3 1602 aa30.94■■■□□ 2.54
CEACAM3-201ENST00000344550 PKD2Q13563 968 aa30.93■■■□□ 2.54
CEACAM3-201ENST00000344550 ADGRL2O95490 1459 aa30.92■■■□□ 2.54
CEACAM3-201ENST00000344550 MROH1Q8NDA8 1641 aa30.91■■■□□ 2.54
CEACAM3-201ENST00000344550 FBXO31Q5XUX0 539 aaPredicted RBP30.91■■■□□ 2.54
CEACAM3-201ENST00000344550 NLRP1Q9C000 1473 aa30.9■■■□□ 2.54
CEACAM3-201ENST00000344550 FAM50AQ14320 339 aaKnown RBP30.89■■■□□ 2.54
CEACAM3-201ENST00000344550 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
CEACAM3-201ENST00000344550 ARHGAP31Q2M1Z3 1444 aa30.86■■■□□ 2.53
CEACAM3-201ENST00000344550 CERKQ8TCT0 537 aa30.85■■■□□ 2.53
CEACAM3-201ENST00000344550 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
CEACAM3-201ENST00000344550 KANK1Q14678 1352 aa30.84■■■□□ 2.53
CEACAM3-201ENST00000344550 DEPDC5O75140 1603 aa30.84■■■□□ 2.53
CEACAM3-201ENST00000344550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.83■■■□□ 2.53
CEACAM3-201ENST00000344550 SPATA31D1Q6ZQQ2 1576 aa30.83■■■□□ 2.53
CEACAM3-201ENST00000344550 THEMISQ8N1K5 641 aaPredicted RBP30.82■■■□□ 2.52
CEACAM3-201ENST00000344550 ERVK-7P63135 1459 aa30.78■■■□□ 2.52
CEACAM3-201ENST00000344550 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
CEACAM3-201ENST00000344550 LMTK2Q8IWU2 1503 aa30.76■■■□□ 2.51
CEACAM3-201ENST00000344550 ROCK1Q13464 1354 aa30.76■■■□□ 2.51
CEACAM3-201ENST00000344550 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 CEP152O94986 1710 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 VWDEQ8N2E2 1590 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 UGGT1Q9NYU2 1555 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.72■■■□□ 2.51
CEACAM3-201ENST00000344550 ANKLE2Q86XL3 938 aa30.71■■■□□ 2.51
CEACAM3-201ENST00000344550 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
CEACAM3-201ENST00000344550 LTBP4Q8N2S1 1624 aa30.67■■■□□ 2.5
CEACAM3-201ENST00000344550 POLR1AO95602 1720 aaPredicted RBP30.63■■■□□ 2.49
CEACAM3-201ENST00000344550 MED14O60244 1454 aa30.63■■■□□ 2.49
CEACAM3-201ENST00000344550 RPRD2Q5VT52 1461 aaKnown RBP30.61■■■□□ 2.49
CEACAM3-201ENST00000344550 EFCAB6Q5THR3 1501 aa30.59■■■□□ 2.49
CEACAM3-201ENST00000344550 NEURL4Q96JN8 1562 aa30.58■■■□□ 2.49
CEACAM3-201ENST00000344550 RRBP1Q9P2E9 1410 aaKnown RBP30.58■■■□□ 2.49
CEACAM3-201ENST00000344550 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
CEACAM3-201ENST00000344550 PPARGC1BQ86YN6 1023 aaKnown RBP30.56■■■□□ 2.48
CEACAM3-201ENST00000344550 NOS1P29475 1434 aa30.56■■■□□ 2.48
CEACAM3-201ENST00000344550 ZNF335Q9H4Z2 1342 aaPredicted RBP30.55■■■□□ 2.48
CEACAM3-201ENST00000344550 UBR1Q8IWV7 1749 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 KDM5AP29375 1690 aaKnown RBP30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 NPHP4O75161 1426 aaPredicted RBP30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 UNC13BO14795 1591 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 SLIT1O75093 1534 aa30.52■■■□□ 2.48
CEACAM3-201ENST00000344550 ARHGAP23Q9P227 1491 aa30.51■■■□□ 2.48
CEACAM3-201ENST00000344550 TET3O43151 1660 aa30.5■■■□□ 2.47
CEACAM3-201ENST00000344550 IDI1Q13907 227 aa30.48■■■□□ 2.47
CEACAM3-201ENST00000344550 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 ITGAEP38570 1179 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 CPS1P31327 1500 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 STAG3Q9UJ98 1225 aa30.46■■■□□ 2.47
CEACAM3-201ENST00000344550 IQGAP1P46940 1657 aa30.45■■■□□ 2.46
CEACAM3-201ENST00000344550 PIK3C2BO00750 1634 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 TMEM2Q9UHN6 1383 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 SYNMO15061 1565 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 GCC2Q8IWJ2 1684 aa30.43■■■□□ 2.46
CEACAM3-201ENST00000344550 TXNDC2Q86VQ3 553 aa30.43■■■□□ 2.46
CEACAM3-201ENST00000344550 IQGAP3Q86VI3 1631 aa30.42■■■□□ 2.46
CEACAM3-201ENST00000344550 NUP155O75694 1391 aa30.4■■■□□ 2.46
CEACAM3-201ENST00000344550 LTKP29376 864 aa30.39■■■□□ 2.46
CEACAM3-201ENST00000344550 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
CEACAM3-201ENST00000344550 HDGFP51858 240 aaKnown RBP30.33■■■□□ 2.45
CEACAM3-201ENST00000344550 NAIPQ13075 1403 aa30.3■■■□□ 2.44
CEACAM3-201ENST00000344550 E9PCH4 1651 aa30.3■■■□□ 2.44
CEACAM3-201ENST00000344550 UBAP1LF5GYI3 381 aa30.28■■■□□ 2.44
CEACAM3-201ENST00000344550 HFM1A2PYH4 1435 aa30.28■■■□□ 2.44
CEACAM3-201ENST00000344550 TOM1O60784 492 aa30.24■■■□□ 2.43
CEACAM3-201ENST00000344550 TMEM131LA2VDJ0 1609 aa30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 ZFYVE9O95405 1425 aa30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 LRRC7Q96NW7 1537 aa30.18■■■□□ 2.42
CEACAM3-201ENST00000344550 PLEKHG1Q9ULL1 1385 aa30.16■■■□□ 2.42
CEACAM3-201ENST00000344550 RIMS2Q9UQ26 1411 aa30.16■■■□□ 2.42
CEACAM3-201ENST00000344550 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
CEACAM3-201ENST00000344550 STRCP1A6NGW2 1772 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms