RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 LRRC9Q6ZRR7 1453 aa25.95■■□□□ 1.74
H3F3C-201ENST00000340398 PLA2R1Q13018 1463 aa25.94■■□□□ 1.74
H3F3C-201ENST00000340398 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
H3F3C-201ENST00000340398 TCOF1Q13428 1488 aaKnown RBP25.93■■□□□ 1.74
H3F3C-201ENST00000340398 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
H3F3C-201ENST00000340398 DNMT1P26358 1616 aaKnown RBP25.91■■□□□ 1.74
H3F3C-201ENST00000340398 TNRQ92752 1358 aa25.91■■□□□ 1.74
H3F3C-201ENST00000340398 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
H3F3C-201ENST00000340398 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
H3F3C-201ENST00000340398 IQSEC2Q5JU85 1478 aa25.88■■□□□ 1.73
H3F3C-201ENST00000340398 KDM5DQ9BY66 1539 aa25.87■■□□□ 1.73
H3F3C-201ENST00000340398 PZPP20742 1482 aa25.86■■□□□ 1.73
H3F3C-201ENST00000340398 UBAP1LF5GYI3 381 aa25.86■■□□□ 1.73
H3F3C-201ENST00000340398 ILDR2Q71H61 639 aa25.86■■□□□ 1.73
H3F3C-201ENST00000340398 MIA2Q96PC5 1412 aa25.82■■□□□ 1.72
H3F3C-201ENST00000340398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.72
H3F3C-201ENST00000340398 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
H3F3C-201ENST00000340398 ANKLE2Q86XL3 938 aa25.79■■□□□ 1.72
H3F3C-201ENST00000340398 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
H3F3C-201ENST00000340398 FAM135AQ9P2D6 1515 aa25.78■■□□□ 1.72
H3F3C-201ENST00000340398 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
H3F3C-201ENST00000340398 MAST1Q9Y2H9 1570 aa25.76■■□□□ 1.71
H3F3C-201ENST00000340398 NEURL4Q96JN8 1562 aa25.75■■□□□ 1.71
H3F3C-201ENST00000340398 CFAP65Q6ZU64 1925 aaKnown RBP25.75■■□□□ 1.71
H3F3C-201ENST00000340398 POLR1AO95602 1720 aaPredicted RBP25.74■■□□□ 1.71
H3F3C-201ENST00000340398 RNF17Q9BXT8 1623 aaKnown RBP25.73■■□□□ 1.71
H3F3C-201ENST00000340398 ABCC3O15438 1527 aa25.73■■□□□ 1.71
H3F3C-201ENST00000340398 NLRP1Q9C000 1473 aa25.72■■□□□ 1.71
H3F3C-201ENST00000340398 UGGT1Q9NYU2 1555 aa25.72■■□□□ 1.71
H3F3C-201ENST00000340398 RRP7BPQ9NSQ0 103 aa25.71■■□□□ 1.71
H3F3C-201ENST00000340398 SHANK2Q9UPX8 1470 aa25.7■■□□□ 1.7
H3F3C-201ENST00000340398 APLP2Q06481 763 aa25.69■■□□□ 1.7
H3F3C-201ENST00000340398 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
H3F3C-201ENST00000340398 MROH1Q8NDA8 1641 aa25.67■■□□□ 1.7
H3F3C-201ENST00000340398 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
H3F3C-201ENST00000340398 SPATA31D1Q6ZQQ2 1576 aa25.66■■□□□ 1.7
H3F3C-201ENST00000340398 ABCC5O15440 1437 aa25.66■■□□□ 1.7
H3F3C-201ENST00000340398 NPHP4O75161 1426 aaPredicted RBP25.66■■□□□ 1.7
H3F3C-201ENST00000340398 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
H3F3C-201ENST00000340398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.7
H3F3C-201ENST00000340398 CEP152O94986 1710 aa25.65■■□□□ 1.7
H3F3C-201ENST00000340398 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
H3F3C-201ENST00000340398 DUOX2Q9NRD8 1548 aa25.64■■□□□ 1.7
H3F3C-201ENST00000340398 KIF15Q9NS87 1388 aa25.63■■□□□ 1.69
H3F3C-201ENST00000340398 MED14O60244 1454 aa25.63■■□□□ 1.69
H3F3C-201ENST00000340398 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
H3F3C-201ENST00000340398 ZC3H13Q5T200 1668 aaKnown RBP25.63■■□□□ 1.69
H3F3C-201ENST00000340398 SOCS7O14512 581 aa25.62■■□□□ 1.69
H3F3C-201ENST00000340398 TOM1O60784 492 aa25.62■■□□□ 1.69
H3F3C-201ENST00000340398 CPS1P31327 1500 aa25.62■■□□□ 1.69
H3F3C-201ENST00000340398 HSPA1LP34931 641 aa25.61■■□□□ 1.69
H3F3C-201ENST00000340398 CHIC2Q9UKJ5 165 aa25.61■■□□□ 1.69
H3F3C-201ENST00000340398 PTPN23Q9H3S7 1636 aa25.61■■□□□ 1.69
H3F3C-201ENST00000340398 DEPDC5O75140 1603 aa25.6■■□□□ 1.69
H3F3C-201ENST00000340398 LTKP29376 864 aa25.57■■□□□ 1.68
H3F3C-201ENST00000340398 DAPK1P53355 1430 aa25.56■■□□□ 1.68
H3F3C-201ENST00000340398 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
H3F3C-201ENST00000340398 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
H3F3C-201ENST00000340398 FGD6Q6ZV73 1430 aa25.54■■□□□ 1.68
H3F3C-201ENST00000340398 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
H3F3C-201ENST00000340398 UBR1Q8IWV7 1749 aa25.54■■□□□ 1.68
H3F3C-201ENST00000340398 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
H3F3C-201ENST00000340398 ERBINQ96RT1 1412 aa25.54■■□□□ 1.68
H3F3C-201ENST00000340398 ARHGAP31Q2M1Z3 1444 aa25.51■■□□□ 1.67
H3F3C-201ENST00000340398 PRDM15P57071 1507 aaPredicted RBP25.5■■□□□ 1.67
H3F3C-201ENST00000340398 SENP3Q9H4L4 574 aaPredicted RBP25.49■■□□□ 1.67
H3F3C-201ENST00000340398 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
H3F3C-201ENST00000340398 LRRC7Q96NW7 1537 aa25.47■■□□□ 1.67
H3F3C-201ENST00000340398 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
H3F3C-201ENST00000340398 ANKRD30AQ9BXX3 1397 aa25.47■■□□□ 1.67
H3F3C-201ENST00000340398 KANK1Q14678 1352 aa25.46■■□□□ 1.67
H3F3C-201ENST00000340398 IDI1Q13907 227 aa25.46■■□□□ 1.67
H3F3C-201ENST00000340398 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
H3F3C-201ENST00000340398 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
H3F3C-201ENST00000340398 EID1Q9Y6B2 187 aa25.45■■□□□ 1.66
H3F3C-201ENST00000340398 ARHGAP23Q9P227 1491 aa25.45■■□□□ 1.66
H3F3C-201ENST00000340398 SLIT1O75093 1534 aa25.42■■□□□ 1.66
H3F3C-201ENST00000340398 PIK3C2BO00750 1634 aa25.42■■□□□ 1.66
H3F3C-201ENST00000340398 TMEM2Q9UHN6 1383 aa25.4■■□□□ 1.66
H3F3C-201ENST00000340398 LMTK2Q8IWU2 1503 aa25.36■■□□□ 1.65
H3F3C-201ENST00000340398 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
H3F3C-201ENST00000340398 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
H3F3C-201ENST00000340398 SYNMO15061 1565 aa25.34■■□□□ 1.65
H3F3C-201ENST00000340398 NOS1P29475 1434 aa25.32■■□□□ 1.64
H3F3C-201ENST00000340398 ADGRL2O95490 1459 aa25.32■■□□□ 1.64
H3F3C-201ENST00000340398 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
H3F3C-201ENST00000340398 XIRP1Q702N8 1843 aaKnown RBP25.31■■□□□ 1.64
H3F3C-201ENST00000340398 RBM33Q96EV2 1170 aaKnown RBP25.31■■□□□ 1.64
H3F3C-201ENST00000340398 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
H3F3C-201ENST00000340398 SLC52A1Q9NWF4 448 aa25.28■■□□□ 1.64
H3F3C-201ENST00000340398 KCNA6P17658 529 aa25.27■■□□□ 1.64
H3F3C-201ENST00000340398 BCANQ96GW7 911 aa25.26■■□□□ 1.63
H3F3C-201ENST00000340398 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
H3F3C-201ENST00000340398 TET3O43151 1660 aa25.25■■□□□ 1.63
H3F3C-201ENST00000340398 KDM5AP29375 1690 aaKnown RBP25.25■■□□□ 1.63
H3F3C-201ENST00000340398 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
H3F3C-201ENST00000340398 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
H3F3C-201ENST00000340398 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
H3F3C-201ENST00000340398 ADGRB3O60242 1522 aa25.21■■□□□ 1.63
H3F3C-201ENST00000340398 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms