RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TNRQ92752 1358 aa22.48■■□□□ 1.19
COMMD4-202ENST00000338995 A2ML1A8K2U0 1454 aa22.47■■□□□ 1.19
COMMD4-202ENST00000338995 MYO3AQ8NEV4 1616 aa22.47■■□□□ 1.19
COMMD4-202ENST00000338995 TCOF1Q13428 1488 aaKnown RBP22.47■■□□□ 1.19
COMMD4-202ENST00000338995 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
COMMD4-202ENST00000338995 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
COMMD4-202ENST00000338995 ZNF142P52746 1687 aaPredicted RBP22.46■■□□□ 1.19
COMMD4-202ENST00000338995 FAM135AQ9P2D6 1515 aa22.43■■□□□ 1.18
COMMD4-202ENST00000338995 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
COMMD4-202ENST00000338995 PZPP20742 1482 aa22.41■■□□□ 1.18
COMMD4-202ENST00000338995 KDM5DQ9BY66 1539 aa22.4■■□□□ 1.18
COMMD4-202ENST00000338995 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
COMMD4-202ENST00000338995 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
COMMD4-202ENST00000338995 SOCS7O14512 581 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 TOM1O60784 492 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 APLP2Q06481 763 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
COMMD4-202ENST00000338995 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
COMMD4-202ENST00000338995 NLRP1Q9C000 1473 aa22.34■■□□□ 1.17
COMMD4-202ENST00000338995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
COMMD4-202ENST00000338995 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
COMMD4-202ENST00000338995 KANK4Q5T7N3 995 aaPredicted RBP22.32■■□□□ 1.16
COMMD4-202ENST00000338995 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
COMMD4-202ENST00000338995 MYOM3Q5VTT5 1437 aa22.3■■□□□ 1.16
COMMD4-202ENST00000338995 SHANK2Q9UPX8 1470 aa22.29■■□□□ 1.16
COMMD4-202ENST00000338995 PIP4K2BP78356 416 aa22.29■■□□□ 1.16
COMMD4-202ENST00000338995 CPS1P31327 1500 aa22.29■■□□□ 1.16
COMMD4-202ENST00000338995 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
COMMD4-202ENST00000338995 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
COMMD4-202ENST00000338995 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.16
COMMD4-202ENST00000338995 MAST1Q9Y2H9 1570 aa22.25■■□□□ 1.15
COMMD4-202ENST00000338995 POLR1AO95602 1720 aaPredicted RBP22.24■■□□□ 1.15
COMMD4-202ENST00000338995 MED14O60244 1454 aa22.22■■□□□ 1.15
COMMD4-202ENST00000338995 HSPA1LP34931 641 aa22.22■■□□□ 1.15
COMMD4-202ENST00000338995 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
COMMD4-202ENST00000338995 ABCC3O15438 1527 aa22.21■■□□□ 1.15
COMMD4-202ENST00000338995 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
COMMD4-202ENST00000338995 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
COMMD4-202ENST00000338995 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
COMMD4-202ENST00000338995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.14
COMMD4-202ENST00000338995 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.14
COMMD4-202ENST00000338995 EID1Q9Y6B2 187 aa22.19■■□□□ 1.14
COMMD4-202ENST00000338995 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
COMMD4-202ENST00000338995 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
COMMD4-202ENST00000338995 KANK1Q14678 1352 aa22.18■■□□□ 1.14
COMMD4-202ENST00000338995 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
COMMD4-202ENST00000338995 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
COMMD4-202ENST00000338995 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
COMMD4-202ENST00000338995 ERVK-7P63135 1459 aa22.17■■□□□ 1.14
COMMD4-202ENST00000338995 CFAP65Q6ZU64 1925 aaKnown RBP22.14■■□□□ 1.13
COMMD4-202ENST00000338995 ABCC5O15440 1437 aa22.13■■□□□ 1.13
COMMD4-202ENST00000338995 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
COMMD4-202ENST00000338995 ERBINQ96RT1 1412 aa22.13■■□□□ 1.13
COMMD4-202ENST00000338995 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
COMMD4-202ENST00000338995 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
COMMD4-202ENST00000338995 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
COMMD4-202ENST00000338995 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
COMMD4-202ENST00000338995 LTKP29376 864 aa22.09■■□□□ 1.13
COMMD4-202ENST00000338995 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
COMMD4-202ENST00000338995 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
COMMD4-202ENST00000338995 DAPK1P53355 1430 aa22.07■■□□□ 1.12
COMMD4-202ENST00000338995 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
COMMD4-202ENST00000338995 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
COMMD4-202ENST00000338995 CEP152O94986 1710 aa22.06■■□□□ 1.12
COMMD4-202ENST00000338995 LRRC7Q96NW7 1537 aa22.05■■□□□ 1.12
COMMD4-202ENST00000338995 FGD6Q6ZV73 1430 aa22.05■■□□□ 1.12
COMMD4-202ENST00000338995 IDI1Q13907 227 aa22.03■■□□□ 1.12
COMMD4-202ENST00000338995 UBR1Q8IWV7 1749 aa22.03■■□□□ 1.12
COMMD4-202ENST00000338995 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
COMMD4-202ENST00000338995 SLIT1O75093 1534 aa22.02■■□□□ 1.12
COMMD4-202ENST00000338995 PRDM15P57071 1507 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-202ENST00000338995 ARHGAP23Q9P227 1491 aa22.02■■□□□ 1.12
COMMD4-202ENST00000338995 FAM50AQ14320 339 aaKnown RBP22.01■■□□□ 1.11
COMMD4-202ENST00000338995 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
COMMD4-202ENST00000338995 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
COMMD4-202ENST00000338995 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
COMMD4-202ENST00000338995 BCANQ96GW7 911 aa21.99■■□□□ 1.11
COMMD4-202ENST00000338995 SYNMO15061 1565 aa21.97■■□□□ 1.11
COMMD4-202ENST00000338995 KCNA6P17658 529 aa21.97■■□□□ 1.11
COMMD4-202ENST00000338995 CROCC2H7BZ55 1655 aa21.97■■□□□ 1.11
COMMD4-202ENST00000338995 MED1Q15648 1581 aaPredicted RBP21.96■■□□□ 1.11
COMMD4-202ENST00000338995 PROSER2Q86WR7 435 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-202ENST00000338995 LMTK2Q8IWU2 1503 aa21.95■■□□□ 1.1
COMMD4-202ENST00000338995 STRCP1A6NGW2 1772 aa21.94■■□□□ 1.1
COMMD4-202ENST00000338995 EFCAB6Q5THR3 1501 aa21.93■■□□□ 1.1
COMMD4-202ENST00000338995 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
COMMD4-202ENST00000338995 PIK3C2BO00750 1634 aa21.91■■□□□ 1.1
COMMD4-202ENST00000338995 ALKQ9UM73 1620 aa21.91■■□□□ 1.1
COMMD4-202ENST00000338995 NOS1P29475 1434 aa21.89■■□□□ 1.09
COMMD4-202ENST00000338995 ANKRD50Q9ULJ7 1429 aa21.89■■□□□ 1.09
COMMD4-202ENST00000338995 TMEM94Q12767 1356 aa21.88■■□□□ 1.09
COMMD4-202ENST00000338995 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
COMMD4-202ENST00000338995 KDM5AP29375 1690 aaKnown RBP21.88■■□□□ 1.09
COMMD4-202ENST00000338995 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
COMMD4-202ENST00000338995 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
COMMD4-202ENST00000338995 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
COMMD4-202ENST00000338995 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.84■■□□□ 1.09
COMMD4-202ENST00000338995 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms