RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 KDM5DQ9BY66 1539 aa23.12■■□□□ 1.29
KATNA1-201ENST00000335643 KIF15Q9NS87 1388 aa23.12■■□□□ 1.29
KATNA1-201ENST00000335643 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
KATNA1-201ENST00000335643 FAM50AQ14320 339 aaKnown RBP23.11■■□□□ 1.29
KATNA1-201ENST00000335643 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
KATNA1-201ENST00000335643 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
KATNA1-201ENST00000335643 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
KATNA1-201ENST00000335643 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
KATNA1-201ENST00000335643 NPATQ14207 1427 aa23.09■■□□□ 1.29
KATNA1-201ENST00000335643 FAM135AQ9P2D6 1515 aa23.07■■□□□ 1.28
KATNA1-201ENST00000335643 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
KATNA1-201ENST00000335643 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
KATNA1-201ENST00000335643 NCOA1Q15788 1441 aa23.05■■□□□ 1.28
KATNA1-201ENST00000335643 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
KATNA1-201ENST00000335643 ABCC3O15438 1527 aa23.05■■□□□ 1.28
KATNA1-201ENST00000335643 WASHC2CQ9Y4E1 1318 aa23.05■■□□□ 1.28
KATNA1-201ENST00000335643 CEP152O94986 1710 aa23.05■■□□□ 1.28
KATNA1-201ENST00000335643 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
KATNA1-201ENST00000335643 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
KATNA1-201ENST00000335643 ANKRD30AQ9BXX3 1397 aa23.03■■□□□ 1.28
KATNA1-201ENST00000335643 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
KATNA1-201ENST00000335643 PZPP20742 1482 aa23.02■■□□□ 1.28
KATNA1-201ENST00000335643 PRDM15P57071 1507 aaPredicted RBP23.02■■□□□ 1.28
KATNA1-201ENST00000335643 ZNF142P52746 1687 aaPredicted RBP23.02■■□□□ 1.27
KATNA1-201ENST00000335643 FBXO31Q5XUX0 539 aaPredicted RBP23.01■■□□□ 1.27
KATNA1-201ENST00000335643 CAMSAP1Q5T5Y3 1602 aa22.99■■□□□ 1.27
KATNA1-201ENST00000335643 CEP170BQ9Y4F5 1589 aaPredicted RBP22.98■■□□□ 1.27
KATNA1-201ENST00000335643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.93■■□□□ 1.26
KATNA1-201ENST00000335643 TNRQ92752 1358 aa22.92■■□□□ 1.26
KATNA1-201ENST00000335643 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
KATNA1-201ENST00000335643 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
KATNA1-201ENST00000335643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.26
KATNA1-201ENST00000335643 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
KATNA1-201ENST00000335643 SPATA31D1Q6ZQQ2 1576 aa22.91■■□□□ 1.26
KATNA1-201ENST00000335643 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
KATNA1-201ENST00000335643 ITGAEP38570 1179 aa22.91■■□□□ 1.26
KATNA1-201ENST00000335643 A2ML1A8K2U0 1454 aa22.9■■□□□ 1.26
KATNA1-201ENST00000335643 ERVK-7P63135 1459 aa22.89■■□□□ 1.25
KATNA1-201ENST00000335643 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
KATNA1-201ENST00000335643 LMTK2Q8IWU2 1503 aa22.86■■□□□ 1.25
KATNA1-201ENST00000335643 ARHGAP31Q2M1Z3 1444 aa22.85■■□□□ 1.25
KATNA1-201ENST00000335643 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
KATNA1-201ENST00000335643 UNC13BO14795 1591 aa22.83■■□□□ 1.25
KATNA1-201ENST00000335643 KANK1Q14678 1352 aa22.83■■□□□ 1.24
KATNA1-201ENST00000335643 NLRP1Q9C000 1473 aa22.83■■□□□ 1.24
KATNA1-201ENST00000335643 NCKAP5LQ9HCH0 1330 aa22.82■■□□□ 1.24
KATNA1-201ENST00000335643 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
KATNA1-201ENST00000335643 UGGT1Q9NYU2 1555 aa22.81■■□□□ 1.24
KATNA1-201ENST00000335643 PTPRTO14522 1441 aa22.8■■□□□ 1.24
KATNA1-201ENST00000335643 POLR1AO95602 1720 aaPredicted RBP22.77■■□□□ 1.24
KATNA1-201ENST00000335643 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
KATNA1-201ENST00000335643 UBR1Q8IWV7 1749 aa22.77■■□□□ 1.24
KATNA1-201ENST00000335643 SYNMO15061 1565 aa22.77■■□□□ 1.24
KATNA1-201ENST00000335643 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
KATNA1-201ENST00000335643 TET3O43151 1660 aa22.76■■□□□ 1.23
KATNA1-201ENST00000335643 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
KATNA1-201ENST00000335643 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
KATNA1-201ENST00000335643 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
KATNA1-201ENST00000335643 GCC2Q8IWJ2 1684 aa22.73■■□□□ 1.23
KATNA1-201ENST00000335643 PKD2Q13563 968 aa22.72■■□□□ 1.23
KATNA1-201ENST00000335643 NOS1P29475 1434 aa22.71■■□□□ 1.23
KATNA1-201ENST00000335643 E9PCH4 1651 aa22.71■■□□□ 1.23
KATNA1-201ENST00000335643 NAIPQ13075 1403 aa22.71■■□□□ 1.23
KATNA1-201ENST00000335643 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
KATNA1-201ENST00000335643 THEMISQ8N1K5 641 aaPredicted RBP22.68■■□□□ 1.22
KATNA1-201ENST00000335643 RPRD2Q5VT52 1461 aaKnown RBP22.68■■□□□ 1.22
KATNA1-201ENST00000335643 NUP155O75694 1391 aa22.65■■□□□ 1.22
KATNA1-201ENST00000335643 CERKQ8TCT0 537 aa22.65■■□□□ 1.22
KATNA1-201ENST00000335643 IDI1Q13907 227 aa22.64■■□□□ 1.22
KATNA1-201ENST00000335643 ZNF335Q9H4Z2 1342 aaPredicted RBP22.64■■□□□ 1.21
KATNA1-201ENST00000335643 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
KATNA1-201ENST00000335643 KDM5AP29375 1690 aaKnown RBP22.63■■□□□ 1.21
KATNA1-201ENST00000335643 MED14O60244 1454 aa22.63■■□□□ 1.21
KATNA1-201ENST00000335643 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
KATNA1-201ENST00000335643 SLIT1O75093 1534 aa22.63■■□□□ 1.21
KATNA1-201ENST00000335643 ARHGAP23Q9P227 1491 aa22.62■■□□□ 1.21
KATNA1-201ENST00000335643 IQGAP1P46940 1657 aa22.61■■□□□ 1.21
KATNA1-201ENST00000335643 MYO5BQ9ULV0 1848 aa22.6■■□□□ 1.21
KATNA1-201ENST00000335643 ADGRB3O60242 1522 aa22.6■■□□□ 1.21
KATNA1-201ENST00000335643 NPHP4O75161 1426 aaPredicted RBP22.6■■□□□ 1.21
KATNA1-201ENST00000335643 FBXO41Q8TF61 875 aa22.59■■□□□ 1.21
KATNA1-201ENST00000335643 LTKP29376 864 aa22.59■■□□□ 1.21
KATNA1-201ENST00000335643 SCAF11Q99590 1463 aaKnown RBP22.57■■□□□ 1.2
KATNA1-201ENST00000335643 TMEM2Q9UHN6 1383 aa22.56■■□□□ 1.2
KATNA1-201ENST00000335643 TMEM131LA2VDJ0 1609 aa22.55■■□□□ 1.2
KATNA1-201ENST00000335643 SLC52A1Q9NWF4 448 aa22.55■■□□□ 1.2
KATNA1-201ENST00000335643 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
KATNA1-201ENST00000335643 STAG3Q9UJ98 1225 aa22.54■■□□□ 1.2
KATNA1-201ENST00000335643 STRCP1A6NGW2 1772 aa22.52■■□□□ 1.2
KATNA1-201ENST00000335643 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
KATNA1-201ENST00000335643 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
KATNA1-201ENST00000335643 IQSEC2Q5JU85 1478 aa22.46■■□□□ 1.19
KATNA1-201ENST00000335643 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
KATNA1-201ENST00000335643 EID1Q9Y6B2 187 aa22.46■■□□□ 1.19
KATNA1-201ENST00000335643 CLTCL1P53675 1640 aa22.45■■□□□ 1.18
KATNA1-201ENST00000335643 TRPM2O94759 1503 aa22.43■■□□□ 1.18
KATNA1-201ENST00000335643 CPS1P31327 1500 aa22.43■■□□□ 1.18
KATNA1-201ENST00000335643 RIMS2Q9UQ26 1411 aa22.42■■□□□ 1.18
KATNA1-201ENST00000335643 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
KATNA1-201ENST00000335643 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms