RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 ZBTB22O15209 634 aa17.23■□□□□ 0.35
SMTN-201ENST00000333137 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
SMTN-201ENST00000333137 RIPK4P57078 832 aa17.22■□□□□ 0.35
SMTN-201ENST00000333137 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
SMTN-201ENST00000333137 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
SMTN-201ENST00000333137 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
SMTN-201ENST00000333137 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
SMTN-201ENST00000333137 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.34
SMTN-201ENST00000333137 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
SMTN-201ENST00000333137 UTP14CQ5TAP6 766 aaKnown RBP17.19■□□□□ 0.34
SMTN-201ENST00000333137 CERS3Q8IU89 383 aa17.19■□□□□ 0.34
SMTN-201ENST00000333137 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
SMTN-201ENST00000333137 IRX3P78415 501 aaPredicted RBP17.18■□□□□ 0.34
SMTN-201ENST00000333137 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
SMTN-201ENST00000333137 PTPRGP23470 1445 aa17.18■□□□□ 0.34
SMTN-201ENST00000333137 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
SMTN-201ENST00000333137 CGNQ9P2M7 1197 aaKnown RBP17.16■□□□□ 0.34
SMTN-201ENST00000333137 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
SMTN-201ENST00000333137 CHD1O14646 1710 aa17.15■□□□□ 0.34
SMTN-201ENST00000333137 MRE11P49959 708 aa17.14■□□□□ 0.33
SMTN-201ENST00000333137 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
SMTN-201ENST00000333137 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
SMTN-201ENST00000333137 NUP160Q12769 1436 aa17.13■□□□□ 0.33
SMTN-201ENST00000333137 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
SMTN-201ENST00000333137 UQCRHLA0A096LP55 91 aa17.13■□□□□ 0.33
SMTN-201ENST00000333137 UQCRHP07919 91 aa17.13■□□□□ 0.33
SMTN-201ENST00000333137 CHIC2Q9UKJ5 165 aa17.13■□□□□ 0.33
SMTN-201ENST00000333137 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
SMTN-201ENST00000333137 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
SMTN-201ENST00000333137 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
SMTN-201ENST00000333137 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
SMTN-201ENST00000333137 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
SMTN-201ENST00000333137 CNPY4Q8N129 248 aa17.11■□□□□ 0.33
SMTN-201ENST00000333137 CBX1P83916 185 aa17.1■□□□□ 0.33
SMTN-201ENST00000333137 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
SMTN-201ENST00000333137 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
SMTN-201ENST00000333137 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
SMTN-201ENST00000333137 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
SMTN-201ENST00000333137 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
SMTN-201ENST00000333137 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
SMTN-201ENST00000333137 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
SMTN-201ENST00000333137 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
SMTN-201ENST00000333137 KIF20AO95235 890 aa17.09■□□□□ 0.33
SMTN-201ENST00000333137 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
SMTN-201ENST00000333137 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.33
SMTN-201ENST00000333137 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
SMTN-201ENST00000333137 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
SMTN-201ENST00000333137 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
SMTN-201ENST00000333137 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SMTN-201ENST00000333137 IGSF3O75054 1194 aa17.06■□□□□ 0.32
SMTN-201ENST00000333137 OFD1O75665 1012 aa17.06■□□□□ 0.32
SMTN-201ENST00000333137 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMTN-201ENST00000333137 LETM1O95202 739 aaPredicted RBP17.05■□□□□ 0.32
SMTN-201ENST00000333137 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
SMTN-201ENST00000333137 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
SMTN-201ENST00000333137 APPP05067 770 aa17.05■□□□□ 0.32
SMTN-201ENST00000333137 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
SMTN-201ENST00000333137 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
SMTN-201ENST00000333137 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
SMTN-201ENST00000333137 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
SMTN-201ENST00000333137 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
SMTN-201ENST00000333137 BECN1Q14457 450 aa17.03■□□□□ 0.32
SMTN-201ENST00000333137 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.32
SMTN-201ENST00000333137 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
SMTN-201ENST00000333137 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
SMTN-201ENST00000333137 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
SMTN-201ENST00000333137 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
SMTN-201ENST00000333137 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
SMTN-201ENST00000333137 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
SMTN-201ENST00000333137 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
SMTN-201ENST00000333137 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
SMTN-201ENST00000333137 TRAK2O60296 914 aa17■□□□□ 0.31
SMTN-201ENST00000333137 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
SMTN-201ENST00000333137 ZNF771Q7L3S4 317 aaPredicted RBP16.99■□□□□ 0.31
SMTN-201ENST00000333137 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
SMTN-201ENST00000333137 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
SMTN-201ENST00000333137 UGGT2Q9NYU1 1516 aa16.98■□□□□ 0.31
SMTN-201ENST00000333137 TAF3Q5VWG9 929 aa16.98■□□□□ 0.31
SMTN-201ENST00000333137 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
SMTN-201ENST00000333137 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
SMTN-201ENST00000333137 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
SMTN-201ENST00000333137 KCNJ4P48050 445 aa16.97■□□□□ 0.31
SMTN-201ENST00000333137 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
SMTN-201ENST00000333137 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
SMTN-201ENST00000333137 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
SMTN-201ENST00000333137 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
SMTN-201ENST00000333137 BCCIPQ9P287 314 aaKnown RBP eCLIP16.96■□□□□ 0.31
SMTN-201ENST00000333137 CFDP1Q9UEE9 299 aaPredicted RBP16.96■□□□□ 0.31
SMTN-201ENST00000333137 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
SMTN-201ENST00000333137 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
SMTN-201ENST00000333137 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
SMTN-201ENST00000333137 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
SMTN-201ENST00000333137 MCM4P33991 863 aa16.95■□□□□ 0.3
SMTN-201ENST00000333137 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
SMTN-201ENST00000333137 TERF1P54274 439 aa16.94■□□□□ 0.3
SMTN-201ENST00000333137 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
SMTN-201ENST00000333137 PLIN1O60240 522 aa16.93■□□□□ 0.3
SMTN-201ENST00000333137 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
SMTN-201ENST00000333137 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
SMTN-201ENST00000333137 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms