RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 PLA2R1Q13018 1463 aa36.76■■■■□ 3.48
TMEM54-201ENST00000329151 FAM135AQ9P2D6 1515 aa36.76■■■■□ 3.48
TMEM54-201ENST00000329151 APLP2Q06481 763 aa36.72■■■■□ 3.47
TMEM54-201ENST00000329151 MAP3K1Q13233 1512 aa36.72■■■■□ 3.47
TMEM54-201ENST00000329151 LTBP4Q8N2S1 1624 aa36.71■■■■□ 3.47
TMEM54-201ENST00000329151 A2ML1A8K2U0 1454 aa36.71■■■■□ 3.47
TMEM54-201ENST00000329151 TNRQ92752 1358 aa36.69■■■■□ 3.46
TMEM54-201ENST00000329151 IQSEC2Q5JU85 1478 aa36.69■■■■□ 3.46
TMEM54-201ENST00000329151 PZPP20742 1482 aa36.67■■■■□ 3.46
TMEM54-201ENST00000329151 TCOF1Q13428 1488 aaKnown RBP36.64■■■■□ 3.46
TMEM54-201ENST00000329151 DNMT1P26358 1616 aaKnown RBP36.64■■■■□ 3.46
TMEM54-201ENST00000329151 KANK4Q5T7N3 995 aaPredicted RBP36.64■■■■□ 3.46
TMEM54-201ENST00000329151 MYOM3Q5VTT5 1437 aa36.64■■■■□ 3.46
TMEM54-201ENST00000329151 MAST1Q9Y2H9 1570 aa36.63■■■■□ 3.45
TMEM54-201ENST00000329151 MIA2Q96PC5 1412 aa36.63■■■■□ 3.45
TMEM54-201ENST00000329151 FBXO31Q5XUX0 539 aaPredicted RBP36.63■■■■□ 3.45
TMEM54-201ENST00000329151 ZNF335Q9H4Z2 1342 aaPredicted RBP36.6■■■■□ 3.45
TMEM54-201ENST00000329151 POLR1AO95602 1720 aaPredicted RBP36.58■■■■□ 3.45
TMEM54-201ENST00000329151 ZC3H13Q5T200 1668 aaKnown RBP36.55■■■■□ 3.44
TMEM54-201ENST00000329151 RNF17Q9BXT8 1623 aaKnown RBP36.55■■■■□ 3.44
TMEM54-201ENST00000329151 EIF2AK4Q9P2K8 1649 aaKnown RBP36.55■■■■□ 3.44
TMEM54-201ENST00000329151 NLRP1Q9C000 1473 aa36.52■■■■□ 3.44
TMEM54-201ENST00000329151 THEMISQ8N1K5 641 aaPredicted RBP36.52■■■■□ 3.44
TMEM54-201ENST00000329151 ANKLE2Q86XL3 938 aa36.49■■■■□ 3.43
TMEM54-201ENST00000329151 UBAP1LF5GYI3 381 aa36.48■■■■□ 3.43
TMEM54-201ENST00000329151 DISP3Q9P2K9 1392 aa36.48■■■■□ 3.43
TMEM54-201ENST00000329151 ABCC3O15438 1527 aa36.47■■■■□ 3.43
TMEM54-201ENST00000329151 DUOX2Q9NRD8 1548 aa36.47■■■■□ 3.43
TMEM54-201ENST00000329151 UGGT1Q9NYU2 1555 aa36.47■■■■□ 3.43
TMEM54-201ENST00000329151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.44■■■■□ 3.42
TMEM54-201ENST00000329151 CFAP65Q6ZU64 1925 aaKnown RBP36.44■■■■□ 3.42
TMEM54-201ENST00000329151 PTPN23Q9H3S7 1636 aa36.43■■■■□ 3.42
TMEM54-201ENST00000329151 CEP152O94986 1710 aa36.41■■■■□ 3.42
TMEM54-201ENST00000329151 CROCC2H7BZ55 1655 aa36.41■■■■□ 3.42
TMEM54-201ENST00000329151 KIF15Q9NS87 1388 aa36.4■■■■□ 3.42
TMEM54-201ENST00000329151 NEURL4Q96JN8 1562 aa36.39■■■■□ 3.42
TMEM54-201ENST00000329151 SHANK2Q9UPX8 1470 aa36.38■■■■□ 3.41
TMEM54-201ENST00000329151 SPATA31D1Q6ZQQ2 1576 aa36.36■■■■□ 3.41
TMEM54-201ENST00000329151 RRP7BPQ9NSQ0 103 aa36.35■■■■□ 3.41
TMEM54-201ENST00000329151 CPS1P31327 1500 aa36.34■■■■□ 3.41
TMEM54-201ENST00000329151 ERVK-7P63135 1459 aa36.34■■■■□ 3.41
TMEM54-201ENST00000329151 MROH1Q8NDA8 1641 aa36.34■■■■□ 3.41
TMEM54-201ENST00000329151 ERBINQ96RT1 1412 aa36.33■■■■□ 3.41
TMEM54-201ENST00000329151 DEPDC5O75140 1603 aa36.32■■■■□ 3.4
TMEM54-201ENST00000329151 ABCC5O15440 1437 aa36.32■■■■□ 3.4
TMEM54-201ENST00000329151 NPHP4O75161 1426 aaPredicted RBP36.32■■■■□ 3.4
TMEM54-201ENST00000329151 SCAF1Q9H7N4 1312 aaKnown RBP36.31■■■■□ 3.4
TMEM54-201ENST00000329151 FGD6Q6ZV73 1430 aa36.3■■■■□ 3.4
TMEM54-201ENST00000329151 DAPK1P53355 1430 aa36.29■■■■□ 3.4
TMEM54-201ENST00000329151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.29■■■■□ 3.4
TMEM54-201ENST00000329151 KANK1Q14678 1352 aa36.28■■■■□ 3.4
TMEM54-201ENST00000329151 IQGAP1P46940 1657 aa36.27■■■■□ 3.4
TMEM54-201ENST00000329151 PRDM15P57071 1507 aaPredicted RBP36.26■■■■□ 3.4
TMEM54-201ENST00000329151 MED14O60244 1454 aa36.25■■■■□ 3.39
TMEM54-201ENST00000329151 TOM1O60784 492 aa36.24■■■■□ 3.39
TMEM54-201ENST00000329151 ANKRD30AQ9BXX3 1397 aa36.24■■■■□ 3.39
TMEM54-201ENST00000329151 CHIC2Q9UKJ5 165 aa36.22■■■■□ 3.39
TMEM54-201ENST00000329151 UBR1Q8IWV7 1749 aa36.2■■■■□ 3.38
TMEM54-201ENST00000329151 PIP4K2BP78356 416 aa36.19■■■■□ 3.38
TMEM54-201ENST00000329151 VWDEQ8N2E2 1590 aa36.19■■■■□ 3.38
TMEM54-201ENST00000329151 ARHGAP31Q2M1Z3 1444 aa36.17■■■■□ 3.38
TMEM54-201ENST00000329151 STAG3Q9UJ98 1225 aa36.16■■■■□ 3.38
TMEM54-201ENST00000329151 FAM50AQ14320 339 aaKnown RBP36.13■■■■□ 3.37
TMEM54-201ENST00000329151 EID1Q9Y6B2 187 aa36.12■■■■□ 3.37
TMEM54-201ENST00000329151 SCAF11Q99590 1463 aaKnown RBP36.11■■■■□ 3.37
TMEM54-201ENST00000329151 ILDR2Q71H61 639 aa36.09■■■■□ 3.37
TMEM54-201ENST00000329151 TXNDC2Q86VQ3 553 aa36.08■■■■□ 3.37
TMEM54-201ENST00000329151 SYNMO15061 1565 aa36.04■■■■□ 3.36
TMEM54-201ENST00000329151 PIK3C2BO00750 1634 aa36.04■■■■□ 3.36
TMEM54-201ENST00000329151 SLIT1O75093 1534 aa36.02■■■■□ 3.36
TMEM54-201ENST00000329151 HSPA1LP34931 641 aa36.01■■■■□ 3.36
TMEM54-201ENST00000329151 LMTK2Q8IWU2 1503 aa36.01■■■■□ 3.36
TMEM54-201ENST00000329151 ARHGAP23Q9P227 1491 aa35.99■■■■□ 3.35
TMEM54-201ENST00000329151 STRCP1A6NGW2 1772 aa35.99■■■■□ 3.35
TMEM54-201ENST00000329151 ADGRL2O95490 1459 aa35.99■■■■□ 3.35
TMEM54-201ENST00000329151 SOCS7O14512 581 aa35.98■■■■□ 3.35
TMEM54-201ENST00000329151 LTKP29376 864 aa35.97■■■■□ 3.35
TMEM54-201ENST00000329151 LRRC7Q96NW7 1537 aa35.96■■■■□ 3.35
TMEM54-201ENST00000329151 EFCAB6Q5THR3 1501 aa35.95■■■■□ 3.35
TMEM54-201ENST00000329151 KDM5AP29375 1690 aaKnown RBP35.94■■■■□ 3.34
TMEM54-201ENST00000329151 TMEM2Q9UHN6 1383 aa35.94■■■■□ 3.34
TMEM54-201ENST00000329151 ANKRD50Q9ULJ7 1429 aa35.92■■■■□ 3.34
TMEM54-201ENST00000329151 IDI1Q13907 227 aa35.9■■■■□ 3.34
TMEM54-201ENST00000329151 BCANQ96GW7 911 aa35.85■■■■□ 3.33
TMEM54-201ENST00000329151 SENP3Q9H4L4 574 aaPredicted RBP35.85■■■■□ 3.33
TMEM54-201ENST00000329151 SLC52A1Q9NWF4 448 aa35.85■■■■□ 3.33
TMEM54-201ENST00000329151 ADGRB3O60242 1522 aa35.83■■■■□ 3.33
TMEM54-201ENST00000329151 NOS1P29475 1434 aa35.83■■■■□ 3.33
TMEM54-201ENST00000329151 RPRD2Q5VT52 1461 aaKnown RBP35.82■■■■□ 3.32
TMEM54-201ENST00000329151 MED1Q15648 1581 aaPredicted RBP35.81■■■■□ 3.32
TMEM54-201ENST00000329151 TET3O43151 1660 aa35.8■■■■□ 3.32
TMEM54-201ENST00000329151 ALKQ9UM73 1620 aa35.79■■■■□ 3.32
TMEM54-201ENST00000329151 GCC2Q8IWJ2 1684 aa35.76■■■■□ 3.32
TMEM54-201ENST00000329151 PHF23Q9BUL5 403 aaPredicted RBP35.76■■■■□ 3.32
TMEM54-201ENST00000329151 SLC26A8Q96RN1 970 aa35.74■■■■□ 3.31
TMEM54-201ENST00000329151 PPP1R15AO75807 674 aaPredicted RBP35.73■■■■□ 3.31
TMEM54-201ENST00000329151 HDGFP51858 240 aaKnown RBP35.73■■■■□ 3.31
TMEM54-201ENST00000329151 XIRP1Q702N8 1843 aaKnown RBP35.72■■■■□ 3.31
TMEM54-201ENST00000329151 UNC13BO14795 1591 aa35.71■■■■□ 3.31
TMEM54-201ENST00000329151 KCNA6P17658 529 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms