RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.73
SCAP-202ENST00000320017 PKD2Q13563 968 aa19.58■□□□□ 0.73
SCAP-202ENST00000320017 RRP9O43818 475 aaKnown RBP19.58■□□□□ 0.73
SCAP-202ENST00000320017 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
SCAP-202ENST00000320017 LRRIQ1Q96JM4 1722 aa19.58■□□□□ 0.72
SCAP-202ENST00000320017 PLIN1O60240 522 aa19.56■□□□□ 0.72
SCAP-202ENST00000320017 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
SCAP-202ENST00000320017 RNF123Q5XPI4 1314 aa19.56■□□□□ 0.72
SCAP-202ENST00000320017 KDM6BO15054 1643 aa19.55■□□□□ 0.72
SCAP-202ENST00000320017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.721e-9■■■■■ 28.3
SCAP-202ENST00000320017 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
SCAP-202ENST00000320017 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
SCAP-202ENST00000320017 SLKQ9H2G2 1235 aaPredicted RBP19.53■□□□□ 0.72
SCAP-202ENST00000320017 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
SCAP-202ENST00000320017 L1TD1Q5T7N2 865 aaKnown RBP19.52■□□□□ 0.72
SCAP-202ENST00000320017 RGS3P49796 1198 aa19.52■□□□□ 0.72
SCAP-202ENST00000320017 ATP10BO94823 1461 aa19.51■□□□□ 0.71
SCAP-202ENST00000320017 ABCC5O15440 1437 aa19.51■□□□□ 0.71
SCAP-202ENST00000320017 GZF1Q9H116 711 aaPredicted RBP19.51■□□□□ 0.71
SCAP-202ENST00000320017 DAPK1P53355 1430 aa19.51■□□□□ 0.71
SCAP-202ENST00000320017 MIA2Q96PC5 1412 aa19.5■□□□□ 0.71
SCAP-202ENST00000320017 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
SCAP-202ENST00000320017 NUP155O75694 1391 aa19.48■□□□□ 0.71
SCAP-202ENST00000320017 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
SCAP-202ENST00000320017 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
SCAP-202ENST00000320017 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
SCAP-202ENST00000320017 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
SCAP-202ENST00000320017 KDM5BQ9UGL1 1544 aa19.45■□□□□ 0.7
SCAP-202ENST00000320017 RBM10P98175 930 aaKnown RBP19.44■□□□□ 0.7
SCAP-202ENST00000320017 CC2D1BQ5T0F9 858 aaKnown RBP19.44■□□□□ 0.7
SCAP-202ENST00000320017 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCAP-202ENST00000320017 ANKRD30BQ9BXX2 1392 aa19.43■□□□□ 0.7
SCAP-202ENST00000320017 CAMSAP2Q08AD1 1489 aa19.43■□□□□ 0.7
SCAP-202ENST00000320017 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
SCAP-202ENST00000320017 USP47Q96K76 1375 aa19.42■□□□□ 0.7
SCAP-202ENST00000320017 KIF14Q15058 1648 aa19.42■□□□□ 0.7
SCAP-202ENST00000320017 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
SCAP-202ENST00000320017 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
SCAP-202ENST00000320017 PANK2Q9BZ23 570 aa19.41■□□□□ 0.7
SCAP-202ENST00000320017 GOLGA6L3A6NEY3 463 aa19.41■□□□□ 0.7
SCAP-202ENST00000320017 ARID3AQ99856 593 aa19.4■□□□□ 0.7
SCAP-202ENST00000320017 FAM161AQ3B820 660 aa19.39■□□□□ 0.7
SCAP-202ENST00000320017 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
SCAP-202ENST00000320017 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
SCAP-202ENST00000320017 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
SCAP-202ENST00000320017 CDCA7LQ96GN5 454 aa19.37■□□□□ 0.69
SCAP-202ENST00000320017 CLCN1P35523 988 aa19.37■□□□□ 0.69
SCAP-202ENST00000320017 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
SCAP-202ENST00000320017 KIF15Q9NS87 1388 aa19.37■□□□□ 0.69
SCAP-202ENST00000320017 ANKRD50Q9ULJ7 1429 aa19.37■□□□□ 0.69
SCAP-202ENST00000320017 SPRYD3Q8NCJ5 442 aa19.36■□□□□ 0.69
SCAP-202ENST00000320017 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
SCAP-202ENST00000320017 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
SCAP-202ENST00000320017 XRCC6P12956 609 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCAP-202ENST00000320017 CHD1O14646 1710 aa19.34■□□□□ 0.69
SCAP-202ENST00000320017 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
SCAP-202ENST00000320017 TRIM44Q96DX7 344 aaPredicted RBP19.32■□□□□ 0.68
SCAP-202ENST00000320017 CYB5RLQ6IPT4 315 aa19.31■□□□□ 0.68
SCAP-202ENST00000320017 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
SCAP-202ENST00000320017 BECN1Q14457 450 aa19.3■□□□□ 0.68
SCAP-202ENST00000320017 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
SCAP-202ENST00000320017 RPRD2Q5VT52 1461 aaKnown RBP19.29■□□□□ 0.68
SCAP-202ENST00000320017 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
SCAP-202ENST00000320017 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
SCAP-202ENST00000320017 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
SCAP-202ENST00000320017 MYH16Q9H6N6 1097 aa19.27■□□□□ 0.68
SCAP-202ENST00000320017 KTN1Q86UP2 1357 aaKnown RBP19.26■□□□□ 0.67
SCAP-202ENST00000320017 ABCA8O94911 1581 aa19.25■□□□□ 0.67
SCAP-202ENST00000320017 ESPNB1AK53 854 aa19.25■□□□□ 0.67
SCAP-202ENST00000320017 CHGAP10645 457 aaKnown RBP19.25■□□□□ 0.67
SCAP-202ENST00000320017 AAMPQ13685 434 aa19.25■□□□□ 0.67
SCAP-202ENST00000320017 DHX29Q7Z478 1369 aaKnown RBP19.25■□□□□ 0.67
SCAP-202ENST00000320017 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
SCAP-202ENST00000320017 CENPQQ7L2Z9 268 aaPredicted RBP19.23■□□□□ 0.67
SCAP-202ENST00000320017 PDCL3Q9H2J4 239 aa19.22■□□□□ 0.67
SCAP-202ENST00000320017 ROCK2O75116 1388 aaKnown RBP19.22■□□□□ 0.67
SCAP-202ENST00000320017 KIF3BO15066 747 aa19.22■□□□□ 0.67
SCAP-202ENST00000320017 TEX14Q8IWB6 1497 aa19.21■□□□□ 0.67
SCAP-202ENST00000320017 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.66
SCAP-202ENST00000320017 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
SCAP-202ENST00000320017 KIAA1211Q6ZU35 1233 aa19.18■□□□□ 0.66
SCAP-202ENST00000320017 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
SCAP-202ENST00000320017 TPM2P07951 284 aa19.18■□□□□ 0.66
SCAP-202ENST00000320017 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
SCAP-202ENST00000320017 GGT6Q6P531 493 aa19.18■□□□□ 0.66
SCAP-202ENST00000320017 PDE4CQ08493 712 aa19.17■□□□□ 0.66
SCAP-202ENST00000320017 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
SCAP-202ENST00000320017 PANK3Q9H999 370 aa19.16■□□□□ 0.66
SCAP-202ENST00000320017 FGD1P98174 961 aa19.16■□□□□ 0.66
SCAP-202ENST00000320017 MYBBP1AQ9BQG0 1328 aaKnown RBP19.16■□□□□ 0.66
SCAP-202ENST00000320017 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
SCAP-202ENST00000320017 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
SCAP-202ENST00000320017 KIAA1107Q9UPP5 1409 aa19.15■□□□□ 0.66
SCAP-202ENST00000320017 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
SCAP-202ENST00000320017 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
SCAP-202ENST00000320017 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
SCAP-202ENST00000320017 PZPP20742 1482 aa19.14■□□□□ 0.66
SCAP-202ENST00000320017 MRE11P49959 708 aa19.14■□□□□ 0.65
SCAP-202ENST00000320017 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
SCAP-202ENST00000320017 CCDC141Q6ZP82 1450 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms