RNA–Protein interactions for RNA: ENST00000311832.5

COMMD1-201, Transcript of copper metabolism domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-201ENST00000311832 KDM5DQ9BY66 1539 aa29.45■■■□□ 2.3
COMMD1-201ENST00000311832 ABCC5O15440 1437 aa29.45■■■□□ 2.3
COMMD1-201ENST00000311832 PPP6R1Q9UPN7 881 aa29.44■■■□□ 2.3
COMMD1-201ENST00000311832 SHANK2Q9UPX8 1470 aa29.43■■■□□ 2.3
COMMD1-201ENST00000311832 FAM135AQ9P2D6 1515 aa29.43■■■□□ 2.3
COMMD1-201ENST00000311832 MROH1Q8NDA8 1641 aa29.42■■■□□ 2.3
COMMD1-201ENST00000311832 DAPK1P53355 1430 aa29.4■■■□□ 2.3
COMMD1-201ENST00000311832 ILDR1Q86SU0 546 aaPredicted RBP29.38■■■□□ 2.29
COMMD1-201ENST00000311832 DUOX2Q9NRD8 1548 aa29.37■■■□□ 2.29
COMMD1-201ENST00000311832 ZC3H13Q5T200 1668 aaKnown RBP29.36■■■□□ 2.29
COMMD1-201ENST00000311832 CEP170BQ9Y4F5 1589 aaPredicted RBP29.35■■■□□ 2.29
COMMD1-201ENST00000311832 CEP152O94986 1710 aa29.34■■■□□ 2.29
COMMD1-201ENST00000311832 CAMSAP1Q5T5Y3 1602 aa29.34■■■□□ 2.29
COMMD1-201ENST00000311832 PZPP20742 1482 aa29.33■■■□□ 2.29
COMMD1-201ENST00000311832 ABCC3O15438 1527 aa29.32■■■□□ 2.28
COMMD1-201ENST00000311832 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
COMMD1-201ENST00000311832 KIF15Q9NS87 1388 aa29.29■■■□□ 2.28
COMMD1-201ENST00000311832 DEPDC5O75140 1603 aa29.28■■■□□ 2.28
COMMD1-201ENST00000311832 WASHC2CQ9Y4E1 1318 aa29.28■■■□□ 2.28
COMMD1-201ENST00000311832 PRDM15P57071 1507 aaPredicted RBP29.26■■■□□ 2.27
COMMD1-201ENST00000311832 FBXO31Q5XUX0 539 aaPredicted RBP29.26■■■□□ 2.27
COMMD1-201ENST00000311832 ERBINQ96RT1 1412 aa29.26■■■□□ 2.27
COMMD1-201ENST00000311832 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
COMMD1-201ENST00000311832 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
COMMD1-201ENST00000311832 PTPRTO14522 1441 aa29.22■■■□□ 2.27
COMMD1-201ENST00000311832 ADGRL2O95490 1459 aa29.22■■■□□ 2.27
COMMD1-201ENST00000311832 TNRQ92752 1358 aa29.21■■■□□ 2.27
COMMD1-201ENST00000311832 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.26
COMMD1-201ENST00000311832 PLA2R1Q13018 1463 aa29.2■■■□□ 2.26
COMMD1-201ENST00000311832 SPATA31D1Q6ZQQ2 1576 aa29.19■■■□□ 2.26
COMMD1-201ENST00000311832 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
COMMD1-201ENST00000311832 ANKRD30AQ9BXX3 1397 aa29.17■■■□□ 2.26
COMMD1-201ENST00000311832 DMRT2Q9Y5R5 561 aa29.17■■■□□ 2.26
COMMD1-201ENST00000311832 FAM50AQ14320 339 aaKnown RBP29.16■■■□□ 2.26
COMMD1-201ENST00000311832 POLR1AO95602 1720 aaPredicted RBP29.15■■■□□ 2.26
COMMD1-201ENST00000311832 ERVK-7P63135 1459 aa29.14■■■□□ 2.26
COMMD1-201ENST00000311832 NCKAP5LQ9HCH0 1330 aa29.14■■■□□ 2.25
COMMD1-201ENST00000311832 VWDEQ8N2E2 1590 aa29.13■■■□□ 2.25
COMMD1-201ENST00000311832 FBXO41Q8TF61 875 aa29.13■■■□□ 2.25
COMMD1-201ENST00000311832 NLRP1Q9C000 1473 aa29.11■■■□□ 2.25
COMMD1-201ENST00000311832 PPARGC1BQ86YN6 1023 aaKnown RBP29.11■■■□□ 2.25
COMMD1-201ENST00000311832 LTBP4Q8N2S1 1624 aa29.1■■■□□ 2.25
COMMD1-201ENST00000311832 CERKQ8TCT0 537 aa29.09■■■□□ 2.25
COMMD1-201ENST00000311832 NEURL4Q96JN8 1562 aa29.09■■■□□ 2.25
COMMD1-201ENST00000311832 UGGT1Q9NYU2 1555 aa29.07■■■□□ 2.24
COMMD1-201ENST00000311832 LMTK2Q8IWU2 1503 aa29.06■■■□□ 2.24
COMMD1-201ENST00000311832 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
COMMD1-201ENST00000311832 UBR1Q8IWV7 1749 aa29.04■■■□□ 2.24
COMMD1-201ENST00000311832 PKD2Q13563 968 aa29.03■■■□□ 2.24
COMMD1-201ENST00000311832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.03■■■□□ 2.24
COMMD1-201ENST00000311832 ANKRD50Q9ULJ7 1429 aa29■■■□□ 2.23
COMMD1-201ENST00000311832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29■■■□□ 2.23
COMMD1-201ENST00000311832 EFCAB6Q5THR3 1501 aa28.99■■■□□ 2.23
COMMD1-201ENST00000311832 UNC13BO14795 1591 aa28.98■■■□□ 2.23
COMMD1-201ENST00000311832 KANK1Q14678 1352 aa28.98■■■□□ 2.23
COMMD1-201ENST00000311832 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
COMMD1-201ENST00000311832 SYNMO15061 1565 aa28.95■■■□□ 2.22
COMMD1-201ENST00000311832 ROCK1Q13464 1354 aa28.94■■■□□ 2.22
COMMD1-201ENST00000311832 ZNF335Q9H4Z2 1342 aaPredicted RBP28.93■■■□□ 2.22
COMMD1-201ENST00000311832 THEMISQ8N1K5 641 aaPredicted RBP28.92■■■□□ 2.22
COMMD1-201ENST00000311832 TET3O43151 1660 aa28.91■■■□□ 2.22
COMMD1-201ENST00000311832 MED14O60244 1454 aa28.91■■■□□ 2.22
COMMD1-201ENST00000311832 IQGAP1P46940 1657 aa28.9■■■□□ 2.22
COMMD1-201ENST00000311832 GCC2Q8IWJ2 1684 aa28.9■■■□□ 2.22
COMMD1-201ENST00000311832 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
COMMD1-201ENST00000311832 KDM5AP29375 1690 aaKnown RBP28.87■■■□□ 2.21
COMMD1-201ENST00000311832 NOS1P29475 1434 aa28.86■■■□□ 2.21
COMMD1-201ENST00000311832 IQSEC2Q5JU85 1478 aa28.86■■■□□ 2.21
COMMD1-201ENST00000311832 ARHGAP23Q9P227 1491 aa28.85■■■□□ 2.21
COMMD1-201ENST00000311832 IQGAP3Q86VI3 1631 aa28.85■■■□□ 2.21
COMMD1-201ENST00000311832 ITGAEP38570 1179 aa28.85■■■□□ 2.21
COMMD1-201ENST00000311832 ANKLE2Q86XL3 938 aa28.85■■■□□ 2.21
COMMD1-201ENST00000311832 NPHP4O75161 1426 aaPredicted RBP28.85■■■□□ 2.21
COMMD1-201ENST00000311832 SLIT1O75093 1534 aa28.84■■■□□ 2.21
COMMD1-201ENST00000311832 E9PCH4 1651 aa28.84■■■□□ 2.21
COMMD1-201ENST00000311832 RPRD2Q5VT52 1461 aaKnown RBP28.81■■■□□ 2.2
COMMD1-201ENST00000311832 STRCP1A6NGW2 1772 aa28.8■■■□□ 2.2
COMMD1-201ENST00000311832 MYO5BQ9ULV0 1848 aa28.78■■■□□ 2.2
COMMD1-201ENST00000311832 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
COMMD1-201ENST00000311832 SCAF11Q99590 1463 aaKnown RBP28.77■■■□□ 2.2
COMMD1-201ENST00000311832 IDI1Q13907 227 aa28.76■■■□□ 2.19
COMMD1-201ENST00000311832 LTKP29376 864 aa28.73■■■□□ 2.19
COMMD1-201ENST00000311832 CPS1P31327 1500 aa28.73■■■□□ 2.19
COMMD1-201ENST00000311832 TMEM2Q9UHN6 1383 aa28.71■■■□□ 2.19
COMMD1-201ENST00000311832 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
COMMD1-201ENST00000311832 NAIPQ13075 1403 aa28.67■■■□□ 2.18
COMMD1-201ENST00000311832 NUP155O75694 1391 aa28.66■■■□□ 2.18
COMMD1-201ENST00000311832 TXNDC2Q86VQ3 553 aa28.66■■■□□ 2.18
COMMD1-201ENST00000311832 SLC52A1Q9NWF4 448 aa28.64■■■□□ 2.18
COMMD1-201ENST00000311832 STAG3Q9UJ98 1225 aa28.63■■■□□ 2.17
COMMD1-201ENST00000311832 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
COMMD1-201ENST00000311832 XIRP1Q702N8 1843 aaKnown RBP28.59■■■□□ 2.17
COMMD1-201ENST00000311832 EID1Q9Y6B2 187 aa28.59■■■□□ 2.17
COMMD1-201ENST00000311832 ZFYVE9O95405 1425 aa28.59■■■□□ 2.17
COMMD1-201ENST00000311832 ALKQ9UM73 1620 aa28.58■■■□□ 2.17
COMMD1-201ENST00000311832 LRRC7Q96NW7 1537 aa28.58■■■□□ 2.17
COMMD1-201ENST00000311832 HFM1A2PYH4 1435 aa28.57■■■□□ 2.16
COMMD1-201ENST00000311832 UBAP1LF5GYI3 381 aa28.54■■■□□ 2.16
COMMD1-201ENST00000311832 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
COMMD1-201ENST00000311832 CLTCL1P53675 1640 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms