RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
FANCA-201ENST00000305699 NCOA1Q15788 1441 aa24.3■■□□□ 1.48
FANCA-201ENST00000305699 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
FANCA-201ENST00000305699 ZNF142P52746 1687 aaPredicted RBP24.29■■□□□ 1.48
FANCA-201ENST00000305699 CROCC2H7BZ55 1655 aa24.29■■□□□ 1.48
FANCA-201ENST00000305699 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
FANCA-201ENST00000305699 PTPRTO14522 1441 aa24.27■■□□□ 1.48
FANCA-201ENST00000305699 ABCC5O15440 1437 aa24.27■■□□□ 1.48
FANCA-201ENST00000305699 SHANK2Q9UPX8 1470 aa24.27■■□□□ 1.48
FANCA-201ENST00000305699 RNF17Q9BXT8 1623 aaKnown RBP24.27■■□□□ 1.48
FANCA-201ENST00000305699 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.48
FANCA-201ENST00000305699 FBXO31Q5XUX0 539 aaPredicted RBP24.27■■□□□ 1.48
FANCA-201ENST00000305699 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
FANCA-201ENST00000305699 PZPP20742 1482 aa24.26■■□□□ 1.47
FANCA-201ENST00000305699 DUOX2Q9NRD8 1548 aa24.26■■□□□ 1.47
FANCA-201ENST00000305699 TCOF1Q13428 1488 aaKnown RBP24.25■■□□□ 1.47
FANCA-201ENST00000305699 DAPK1P53355 1430 aa24.25■■□□□ 1.47
FANCA-201ENST00000305699 TNRQ92752 1358 aa24.24■■□□□ 1.47
FANCA-201ENST00000305699 KIF15Q9NS87 1388 aa24.24■■□□□ 1.47
FANCA-201ENST00000305699 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
FANCA-201ENST00000305699 RRP7BPQ9NSQ0 103 aa24.23■■□□□ 1.47
FANCA-201ENST00000305699 NCKAP5LQ9HCH0 1330 aa24.22■■□□□ 1.47
FANCA-201ENST00000305699 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
FANCA-201ENST00000305699 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
FANCA-201ENST00000305699 ABCC3O15438 1527 aa24.2■■□□□ 1.46
FANCA-201ENST00000305699 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
FANCA-201ENST00000305699 PLA2R1Q13018 1463 aa24.19■■□□□ 1.46
FANCA-201ENST00000305699 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
FANCA-201ENST00000305699 MROH1Q8NDA8 1641 aa24.18■■□□□ 1.46
FANCA-201ENST00000305699 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
FANCA-201ENST00000305699 PKD2Q13563 968 aa24.17■■□□□ 1.46
FANCA-201ENST00000305699 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
FANCA-201ENST00000305699 CEP152O94986 1710 aa24.16■■□□□ 1.46
FANCA-201ENST00000305699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.457e-7■■□□□ 12.7
FANCA-201ENST00000305699 NLRP1Q9C000 1473 aa24.12■■□□□ 1.45
FANCA-201ENST00000305699 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
FANCA-201ENST00000305699 SPATA31D1Q6ZQQ2 1576 aa24.09■■□□□ 1.45
FANCA-201ENST00000305699 CFAP65Q6ZU64 1925 aaKnown RBP24.09■■□□□ 1.45
FANCA-201ENST00000305699 ERVK-7P63135 1459 aa24.08■■□□□ 1.45
FANCA-201ENST00000305699 LTBP4Q8N2S1 1624 aa24.08■■□□□ 1.45
FANCA-201ENST00000305699 KANK1Q14678 1352 aa24.08■■□□□ 1.44
FANCA-201ENST00000305699 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.44
FANCA-201ENST00000305699 THEMISQ8N1K5 641 aaPredicted RBP24.07■■□□□ 1.44
FANCA-201ENST00000305699 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
FANCA-201ENST00000305699 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
FANCA-201ENST00000305699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.44
FANCA-201ENST00000305699 ADGRL2O95490 1459 aa24.05■■□□□ 1.44
FANCA-201ENST00000305699 ZNF335Q9H4Z2 1342 aaPredicted RBP24.05■■□□□ 1.44
FANCA-201ENST00000305699 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
FANCA-201ENST00000305699 ANKLE2Q86XL3 938 aa24.03■■□□□ 1.44
FANCA-201ENST00000305699 ARHGAP31Q2M1Z3 1444 aa24.01■■□□□ 1.43
FANCA-201ENST00000305699 NEURL4Q96JN8 1562 aa24■■□□□ 1.43
FANCA-201ENST00000305699 ANKRD50Q9ULJ7 1429 aa23.97■■□□□ 1.43
FANCA-201ENST00000305699 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
FANCA-201ENST00000305699 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.42
FANCA-201ENST00000305699 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.42
FANCA-201ENST00000305699 UBR1Q8IWV7 1749 aa23.94■■□□□ 1.42
FANCA-201ENST00000305699 NPHP4O75161 1426 aaPredicted RBP23.94■■□□□ 1.42
FANCA-201ENST00000305699 ITGAEP38570 1179 aa23.93■■□□□ 1.42
FANCA-201ENST00000305699 MED14O60244 1454 aa23.91■■□□□ 1.42
FANCA-201ENST00000305699 EFCAB6Q5THR3 1501 aa23.9■■□□□ 1.42
FANCA-201ENST00000305699 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
FANCA-201ENST00000305699 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
FANCA-201ENST00000305699 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
FANCA-201ENST00000305699 ROCK1Q13464 1354 aa23.88■■□□□ 1.41
FANCA-201ENST00000305699 UBAP1LF5GYI3 381 aa23.85■■□□□ 1.41
FANCA-201ENST00000305699 SCAF11Q99590 1463 aaKnown RBP23.85■■□□□ 1.41
FANCA-201ENST00000305699 CPS1P31327 1500 aa23.85■■□□□ 1.41
FANCA-201ENST00000305699 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
FANCA-201ENST00000305699 SYNMO15061 1565 aa23.84■■□□□ 1.41
FANCA-201ENST00000305699 IDI1Q13907 227 aa23.84■■□□□ 1.41
FANCA-201ENST00000305699 SLIT1O75093 1534 aa23.83■■□□□ 1.41
FANCA-201ENST00000305699 UNC13BO14795 1591 aa23.83■■□□□ 1.41
FANCA-201ENST00000305699 EID1Q9Y6B2 187 aa23.83■■□□□ 1.4
FANCA-201ENST00000305699 ARHGAP23Q9P227 1491 aa23.82■■□□□ 1.4
FANCA-201ENST00000305699 TET3O43151 1660 aa23.82■■□□□ 1.4
FANCA-201ENST00000305699 NOS1P29475 1434 aa23.82■■□□□ 1.4
FANCA-201ENST00000305699 LTKP29376 864 aa23.81■■□□□ 1.4
FANCA-201ENST00000305699 RPRD2Q5VT52 1461 aaKnown RBP23.81■■□□□ 1.4
FANCA-201ENST00000305699 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
FANCA-201ENST00000305699 KDM5AP29375 1690 aaKnown RBP23.78■■□□□ 1.4
FANCA-201ENST00000305699 GCC2Q8IWJ2 1684 aa23.78■■□□□ 1.4
FANCA-201ENST00000305699 SLC52A1Q9NWF4 448 aa23.77■■□□□ 1.4
FANCA-201ENST00000305699 ADGRB3O60242 1522 aa23.76■■□□□ 1.39
FANCA-201ENST00000305699 NUP155O75694 1391 aa23.74■■□□□ 1.39
FANCA-201ENST00000305699 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
FANCA-201ENST00000305699 IQGAP3Q86VI3 1631 aa23.74■■□□□ 1.39
FANCA-201ENST00000305699 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
FANCA-201ENST00000305699 STRCP1A6NGW2 1772 aa23.72■■□□□ 1.39
FANCA-201ENST00000305699 E9PCH4 1651 aa23.71■■□□□ 1.39
FANCA-201ENST00000305699 TOM1O60784 492 aa23.71■■□□□ 1.39
FANCA-201ENST00000305699 PIP4K2BP78356 416 aa23.69■■□□□ 1.38
FANCA-201ENST00000305699 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
FANCA-201ENST00000305699 CHGAP10645 457 aaKnown RBP23.67■■□□□ 1.38
FANCA-201ENST00000305699 MYO5BQ9ULV0 1848 aa23.67■■□□□ 1.38
FANCA-201ENST00000305699 BCANQ96GW7 911 aa23.67■■□□□ 1.38
FANCA-201ENST00000305699 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
FANCA-201ENST00000305699 TMEM131LA2VDJ0 1609 aa23.64■■□□□ 1.37
FANCA-201ENST00000305699 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
FANCA-201ENST00000305699 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms