RNA–Protein interactions for RNA: ENST00000302392.4

TMEM42-201, Transcript of transmembrane protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM42, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-201ENST00000302392 CCNB3Q8WWL7 1395 aa28.08■■■□□ 2.09
TMEM42-201ENST00000302392 TNRQ92752 1358 aa28.08■■■□□ 2.09
TMEM42-201ENST00000302392 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
TMEM42-201ENST00000302392 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
TMEM42-201ENST00000302392 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
TMEM42-201ENST00000302392 PZPP20742 1482 aa28.04■■■□□ 2.08
TMEM42-201ENST00000302392 TIAM1Q13009 1591 aa28.01■■■□□ 2.07
TMEM42-201ENST00000302392 DEPDC5O75140 1603 aa28■■■□□ 2.07
TMEM42-201ENST00000302392 RTEL1-TNFRSF6BF6WH68 1400 aa27.98■■■□□ 2.07
TMEM42-201ENST00000302392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.98■■■□□ 2.07
TMEM42-201ENST00000302392 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
TMEM42-201ENST00000302392 MBD5Q9P267 1494 aa27.97■■■□□ 2.07
TMEM42-201ENST00000302392 RNF17Q9BXT8 1623 aaKnown RBP27.97■■■□□ 2.07
TMEM42-201ENST00000302392 NPHP4O75161 1426 aaPredicted RBP27.97■■■□□ 2.07
TMEM42-201ENST00000302392 DHX29Q7Z478 1369 aaKnown RBP27.97■■■□□ 2.07
TMEM42-201ENST00000302392 MED14O60244 1454 aa27.96■■■□□ 2.07
TMEM42-201ENST00000302392 SYNMO15061 1565 aa27.96■■■□□ 2.07
TMEM42-201ENST00000302392 UGGT1Q9NYU2 1555 aa27.96■■■□□ 2.07
TMEM42-201ENST00000302392 FBXO31Q5XUX0 539 aaPredicted RBP27.96■■■□□ 2.07
TMEM42-201ENST00000302392 ANKLE2Q86XL3 938 aa27.96■■■□□ 2.07
TMEM42-201ENST00000302392 MTUS2Q5JR59 1369 aa27.96■■■□□ 2.07
TMEM42-201ENST00000302392 NLRP1Q9C000 1473 aa27.95■■■□□ 2.07
TMEM42-201ENST00000302392 ZNF644Q9H582 1327 aaPredicted RBP27.92■■■□□ 2.06
TMEM42-201ENST00000302392 STRCP1A6NGW2 1772 aa27.92■■■□□ 2.06
TMEM42-201ENST00000302392 EHBP1L1Q8N3D4 1523 aa27.91■■■□□ 2.06
TMEM42-201ENST00000302392 KIF3BO15066 747 aa27.9■■■□□ 2.06
TMEM42-201ENST00000302392 THEMISQ8N1K5 641 aaPredicted RBP27.89■■■□□ 2.06
TMEM42-201ENST00000302392 MIA2Q96PC5 1412 aa27.89■■■□□ 2.06
TMEM42-201ENST00000302392 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
TMEM42-201ENST00000302392 LRRC7Q96NW7 1537 aa27.87■■■□□ 2.05
TMEM42-201ENST00000302392 CCDC141Q6ZP82 1450 aa27.87■■■□□ 2.05
TMEM42-201ENST00000302392 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
TMEM42-201ENST00000302392 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
TMEM42-201ENST00000302392 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
TMEM42-201ENST00000302392 ZC3H13Q5T200 1668 aaKnown RBP27.8■■■□□ 2.04
TMEM42-201ENST00000302392 CAMSAP2Q08AD1 1489 aa27.79■■■□□ 2.04
TMEM42-201ENST00000302392 ABCC3O15438 1527 aa27.74■■■□□ 2.03
TMEM42-201ENST00000302392 ERVK-7P63135 1459 aa27.72■■■□□ 2.03
TMEM42-201ENST00000302392 RGS17Q9UGC6 210 aaPredicted RBP27.72■■■□□ 2.03
TMEM42-201ENST00000302392 UBR1Q8IWV7 1749 aa27.72■■■□□ 2.03
TMEM42-201ENST00000302392 ARHGEF5Q12774 1597 aa27.71■■■□□ 2.03
TMEM42-201ENST00000302392 XIRP1Q702N8 1843 aaKnown RBP27.7■■■□□ 2.02
TMEM42-201ENST00000302392 SCAF11Q99590 1463 aaKnown RBP27.68■■■□□ 2.02
TMEM42-201ENST00000302392 NCOA2Q15596 1464 aa27.67■■■□□ 2.02
TMEM42-201ENST00000302392 RSPH4AQ5TD94 716 aa27.66■■■□□ 2.02
TMEM42-201ENST00000302392 EIF2AK4Q9P2K8 1649 aaKnown RBP27.66■■■□□ 2.02
TMEM42-201ENST00000302392 CEP152O94986 1710 aa27.65■■■□□ 2.02
TMEM42-201ENST00000302392 MROH1Q8NDA8 1641 aa27.63■■■□□ 2.01
TMEM42-201ENST00000302392 CFAP65Q6ZU64 1925 aaKnown RBP27.6■■■□□ 2.01
TMEM42-201ENST00000302392 SLIT1O75093 1534 aa27.6■■■□□ 2.01
TMEM42-201ENST00000302392 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
TMEM42-201ENST00000302392 ARHGAP23Q9P227 1491 aa27.59■■■□□ 2.01
TMEM42-201ENST00000302392 TSPY4P0CV99 314 aa27.57■■■□□ 2
TMEM42-201ENST00000302392 TSPY10P0CW01 314 aa27.57■■■□□ 2
TMEM42-201ENST00000302392 FAM135BQ49AJ0 1406 aa27.56■■■□□ 2
TMEM42-201ENST00000302392 SETD1AO15047 1707 aaKnown RBP27.55■■■□□ 2
TMEM42-201ENST00000302392 POTEAQ6S8J7 498 aa27.54■■■□□ 2
TMEM42-201ENST00000302392 ROBO1Q9Y6N7 1651 aa27.54■■■□□ 2
TMEM42-201ENST00000302392 LTKP29376 864 aa27.52■■■□□ 2
TMEM42-201ENST00000302392 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
TMEM42-201ENST00000302392 PIK3C2BO00750 1634 aa27.49■■□□□ 1.99
TMEM42-201ENST00000302392 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
TMEM42-201ENST00000302392 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
TMEM42-201ENST00000302392 TMEM94Q12767 1356 aa27.46■■□□□ 1.99
TMEM42-201ENST00000302392 LRRC9Q6ZRR7 1453 aa27.45■■□□□ 1.99
TMEM42-201ENST00000302392 EID1Q9Y6B2 187 aa27.45■■□□□ 1.98
TMEM42-201ENST00000302392 DUOX2Q9NRD8 1548 aa27.44■■□□□ 1.98
TMEM42-201ENST00000302392 ARHGAP31Q2M1Z3 1444 aa27.43■■□□□ 1.98
TMEM42-201ENST00000302392 TMEM2Q9UHN6 1383 aa27.41■■□□□ 1.98
TMEM42-201ENST00000302392 KDM5AP29375 1690 aaKnown RBP27.4■■□□□ 1.98
TMEM42-201ENST00000302392 PHLPP1O60346 1717 aa27.38■■□□□ 1.97
TMEM42-201ENST00000302392 EFCAB6Q5THR3 1501 aa27.38■■□□□ 1.97
TMEM42-201ENST00000302392 NWD1Q149M9 1564 aa27.38■■□□□ 1.97
TMEM42-201ENST00000302392 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
TMEM42-201ENST00000302392 KCNA6P17658 529 aa27.33■■□□□ 1.97
TMEM42-201ENST00000302392 CROCC2H7BZ55 1655 aa27.33■■□□□ 1.97
TMEM42-201ENST00000302392 TET3O43151 1660 aa27.33■■□□□ 1.97
TMEM42-201ENST00000302392 ERBINQ96RT1 1412 aa27.33■■□□□ 1.96
TMEM42-201ENST00000302392 STAG3Q9UJ98 1225 aa27.32■■□□□ 1.96
TMEM42-201ENST00000302392 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
TMEM42-201ENST00000302392 KIF15Q9NS87 1388 aa27.31■■□□□ 1.96
TMEM42-201ENST00000302392 JCADQ9P266 1359 aa27.3■■□□□ 1.96
TMEM42-201ENST00000302392 RBM33Q96EV2 1170 aaKnown RBP27.29■■□□□ 1.96
TMEM42-201ENST00000302392 MSH6P52701 1360 aa27.29■■□□□ 1.96
TMEM42-201ENST00000302392 MYOM3Q5VTT5 1437 aa27.29■■□□□ 1.96
TMEM42-201ENST00000302392 COL16A1Q07092 1604 aaPredicted RBP27.27■■□□□ 1.96
TMEM42-201ENST00000302392 ADGRB3O60242 1522 aa27.27■■□□□ 1.96
TMEM42-201ENST00000302392 SLC26A8Q96RN1 970 aa27.26■■□□□ 1.95
TMEM42-201ENST00000302392 KANK1Q14678 1352 aa27.22■■□□□ 1.95
TMEM42-201ENST00000302392 LMTK2Q8IWU2 1503 aa27.22■■□□□ 1.95
TMEM42-201ENST00000302392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
TMEM42-201ENST00000302392 LRP6O75581 1613 aa27.22■■□□□ 1.95
TMEM42-201ENST00000302392 IDI1Q13907 227 aa27.19■■□□□ 1.94
TMEM42-201ENST00000302392 SLAIN2Q9P270 581 aa27.19■■□□□ 1.94
TMEM42-201ENST00000302392 VPS8Q8N3P4 1428 aa27.17■■□□□ 1.94
TMEM42-201ENST00000302392 CHD2O14647 1828 aaKnown RBP27.17■■□□□ 1.94
TMEM42-201ENST00000302392 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
TMEM42-201ENST00000302392 UPF1Q92900 1129 aaKnown RBP eCLIP27.16■■□□□ 1.94
TMEM42-201ENST00000302392 RRP7BPQ9NSQ0 103 aa27.16■■□□□ 1.94
TMEM42-201ENST00000302392 ABCC5O15440 1437 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms