RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 PLA2R1Q13018 1463 aa31.01■■■□□ 2.56
CXCL3-201ENST00000296026 KDM5DQ9BY66 1539 aa31.01■■■□□ 2.55
CXCL3-201ENST00000296026 FAM135AQ9P2D6 1515 aa30.99■■■□□ 2.55
CXCL3-201ENST00000296026 PKD2Q13563 968 aa30.98■■■□□ 2.55
CXCL3-201ENST00000296026 WASHC2CQ9Y4E1 1318 aa30.98■■■□□ 2.55
CXCL3-201ENST00000296026 A2ML1A8K2U0 1454 aa30.97■■■□□ 2.55
CXCL3-201ENST00000296026 MYOM3Q5VTT5 1437 aa30.97■■■□□ 2.55
CXCL3-201ENST00000296026 FBXO31Q5XUX0 539 aaPredicted RBP30.96■■■□□ 2.55
CXCL3-201ENST00000296026 MAST1Q9Y2H9 1570 aa30.96■■■□□ 2.55
CXCL3-201ENST00000296026 TCOF1Q13428 1488 aaKnown RBP30.95■■■□□ 2.55
CXCL3-201ENST00000296026 MIA2Q96PC5 1412 aa30.95■■■□□ 2.54
CXCL3-201ENST00000296026 PZPP20742 1482 aa30.95■■■□□ 2.54
CXCL3-201ENST00000296026 TNRQ92752 1358 aa30.93■■■□□ 2.54
CXCL3-201ENST00000296026 DNMT1P26358 1616 aaKnown RBP30.93■■■□□ 2.54
CXCL3-201ENST00000296026 IQSEC2Q5JU85 1478 aa30.89■■■□□ 2.54
CXCL3-201ENST00000296026 ZNF335Q9H4Z2 1342 aaPredicted RBP30.89■■■□□ 2.54
CXCL3-201ENST00000296026 RNF17Q9BXT8 1623 aaKnown RBP30.87■■■□□ 2.53
CXCL3-201ENST00000296026 APLP2Q06481 763 aa30.85■■■□□ 2.53
CXCL3-201ENST00000296026 EIF2AK4Q9P2K8 1649 aaKnown RBP30.84■■■□□ 2.53
CXCL3-201ENST00000296026 ABCC3O15438 1527 aa30.8■■■□□ 2.52
CXCL3-201ENST00000296026 ZC3H13Q5T200 1668 aaKnown RBP30.8■■■□□ 2.52
CXCL3-201ENST00000296026 POLR1AO95602 1720 aaPredicted RBP30.79■■■□□ 2.52
CXCL3-201ENST00000296026 NLRP1Q9C000 1473 aa30.79■■■□□ 2.52
CXCL3-201ENST00000296026 DUOX2Q9NRD8 1548 aa30.77■■■□□ 2.52
CXCL3-201ENST00000296026 MROH1Q8NDA8 1641 aa30.76■■■□□ 2.52
CXCL3-201ENST00000296026 PTPN23Q9H3S7 1636 aa30.76■■■□□ 2.52
CXCL3-201ENST00000296026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.76■■■□□ 2.51
CXCL3-201ENST00000296026 NEURL4Q96JN8 1562 aa30.75■■■□□ 2.51
CXCL3-201ENST00000296026 THEMISQ8N1K5 641 aaPredicted RBP30.75■■■□□ 2.51
CXCL3-201ENST00000296026 UGGT1Q9NYU2 1555 aa30.75■■■□□ 2.51
CXCL3-201ENST00000296026 CROCC2H7BZ55 1655 aa30.74■■■□□ 2.51
CXCL3-201ENST00000296026 ABCC5O15440 1437 aa30.73■■■□□ 2.51
CXCL3-201ENST00000296026 SHANK2Q9UPX8 1470 aa30.73■■■□□ 2.51
CXCL3-201ENST00000296026 SPATA31D1Q6ZQQ2 1576 aa30.72■■■□□ 2.51
CXCL3-201ENST00000296026 ANKLE2Q86XL3 938 aa30.72■■■□□ 2.51
CXCL3-201ENST00000296026 KIF15Q9NS87 1388 aa30.71■■■□□ 2.51
CXCL3-201ENST00000296026 CEP152O94986 1710 aa30.71■■■□□ 2.51
CXCL3-201ENST00000296026 FGD6Q6ZV73 1430 aa30.69■■■□□ 2.5
CXCL3-201ENST00000296026 ERVK-7P63135 1459 aa30.69■■■□□ 2.5
CXCL3-201ENST00000296026 DAPK1P53355 1430 aa30.68■■■□□ 2.5
CXCL3-201ENST00000296026 UBAP1LF5GYI3 381 aa30.68■■■□□ 2.5
CXCL3-201ENST00000296026 RRP7BPQ9NSQ0 103 aa30.68■■■□□ 2.5
CXCL3-201ENST00000296026 ERBINQ96RT1 1412 aa30.65■■■□□ 2.5
CXCL3-201ENST00000296026 DEPDC5O75140 1603 aa30.64■■■□□ 2.5
CXCL3-201ENST00000296026 PRDM15P57071 1507 aaPredicted RBP30.63■■■□□ 2.49
CXCL3-201ENST00000296026 DISP3Q9P2K9 1392 aa30.63■■■□□ 2.49
CXCL3-201ENST00000296026 NPHP4O75161 1426 aaPredicted RBP30.62■■■□□ 2.49
CXCL3-201ENST00000296026 MED14O60244 1454 aa30.62■■■□□ 2.49
CXCL3-201ENST00000296026 CFAP65Q6ZU64 1925 aaKnown RBP30.61■■■□□ 2.49
CXCL3-201ENST00000296026 CPS1P31327 1500 aa30.61■■■□□ 2.49
CXCL3-201ENST00000296026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.58■■■□□ 2.49
CXCL3-201ENST00000296026 CHIC2Q9UKJ5 165 aa30.58■■■□□ 2.49
CXCL3-201ENST00000296026 ARHGAP31Q2M1Z3 1444 aa30.57■■■□□ 2.48
CXCL3-201ENST00000296026 VWDEQ8N2E2 1590 aa30.57■■■□□ 2.48
CXCL3-201ENST00000296026 IQGAP1P46940 1657 aa30.55■■■□□ 2.48
CXCL3-201ENST00000296026 ANKRD30AQ9BXX3 1397 aa30.55■■■□□ 2.48
CXCL3-201ENST00000296026 UBR1Q8IWV7 1749 aa30.55■■■□□ 2.48
CXCL3-201ENST00000296026 KANK1Q14678 1352 aa30.53■■■□□ 2.48
CXCL3-201ENST00000296026 TOM1O60784 492 aa30.46■■■□□ 2.47
CXCL3-201ENST00000296026 FAM50AQ14320 339 aaKnown RBP30.46■■■□□ 2.47
CXCL3-201ENST00000296026 ILDR2Q71H61 639 aa30.46■■■□□ 2.47
CXCL3-201ENST00000296026 SCAF1Q9H7N4 1312 aaKnown RBP30.45■■■□□ 2.46
CXCL3-201ENST00000296026 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
CXCL3-201ENST00000296026 LMTK2Q8IWU2 1503 aa30.44■■■□□ 2.46
CXCL3-201ENST00000296026 ADGRL2O95490 1459 aa30.44■■■□□ 2.46
CXCL3-201ENST00000296026 ARHGAP23Q9P227 1491 aa30.44■■■□□ 2.46
CXCL3-201ENST00000296026 SLIT1O75093 1534 aa30.43■■■□□ 2.46
CXCL3-201ENST00000296026 PIP4K2BP78356 416 aa30.43■■■□□ 2.46
CXCL3-201ENST00000296026 PIK3C2BO00750 1634 aa30.42■■■□□ 2.46
CXCL3-201ENST00000296026 STRCP1A6NGW2 1772 aa30.41■■■□□ 2.46
CXCL3-201ENST00000296026 LTKP29376 864 aa30.41■■■□□ 2.46
CXCL3-201ENST00000296026 TXNDC2Q86VQ3 553 aa30.41■■■□□ 2.46
CXCL3-201ENST00000296026 STAG3Q9UJ98 1225 aa30.37■■■□□ 2.45
CXCL3-201ENST00000296026 EID1Q9Y6B2 187 aa30.37■■■□□ 2.45
CXCL3-201ENST00000296026 LRRC7Q96NW7 1537 aa30.36■■■□□ 2.45
CXCL3-201ENST00000296026 HSPA1LP34931 641 aa30.35■■■□□ 2.45
CXCL3-201ENST00000296026 EFCAB6Q5THR3 1501 aa30.35■■■□□ 2.45
CXCL3-201ENST00000296026 SYNMO15061 1565 aa30.34■■■□□ 2.45
CXCL3-201ENST00000296026 TMEM2Q9UHN6 1383 aa30.34■■■□□ 2.45
CXCL3-201ENST00000296026 IDI1Q13907 227 aa30.34■■■□□ 2.45
CXCL3-201ENST00000296026 ANKRD50Q9ULJ7 1429 aa30.33■■■□□ 2.45
CXCL3-201ENST00000296026 KDM5AP29375 1690 aaKnown RBP30.32■■■□□ 2.44
CXCL3-201ENST00000296026 ALKQ9UM73 1620 aa30.32■■■□□ 2.44
CXCL3-201ENST00000296026 NOS1P29475 1434 aa30.3■■■□□ 2.44
CXCL3-201ENST00000296026 SOCS7O14512 581 aa30.25■■■□□ 2.43
CXCL3-201ENST00000296026 ADGRB3O60242 1522 aa30.23■■■□□ 2.43
CXCL3-201ENST00000296026 SLC52A1Q9NWF4 448 aa30.23■■■□□ 2.43
CXCL3-201ENST00000296026 RPRD2Q5VT52 1461 aaKnown RBP30.23■■■□□ 2.43
CXCL3-201ENST00000296026 TET3O43151 1660 aa30.2■■■□□ 2.43
CXCL3-201ENST00000296026 UNC13BO14795 1591 aa30.17■■■□□ 2.42
CXCL3-201ENST00000296026 XIRP1Q702N8 1843 aaKnown RBP30.17■■■□□ 2.42
CXCL3-201ENST00000296026 ROCK1Q13464 1354 aa30.15■■■□□ 2.42
CXCL3-201ENST00000296026 MED1Q15648 1581 aaPredicted RBP30.15■■■□□ 2.42
CXCL3-201ENST00000296026 GCC2Q8IWJ2 1684 aa30.15■■■□□ 2.42
CXCL3-201ENST00000296026 SLC26A8Q96RN1 970 aa30.15■■■□□ 2.42
CXCL3-201ENST00000296026 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
CXCL3-201ENST00000296026 KCNA6P17658 529 aa30.11■■■□□ 2.41
CXCL3-201ENST00000296026 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
CXCL3-201ENST00000296026 ITGAEP38570 1179 aa30.09■■■□□ 2.41
CXCL3-201ENST00000296026 BCANQ96GW7 911 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms