RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.96
TFF3-201ENST00000291525 MAST1Q9Y2H9 1570 aa27.32■■□□□ 1.96
TFF3-201ENST00000291525 APLP2Q06481 763 aa27.32■■□□□ 1.96
TFF3-201ENST00000291525 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
TFF3-201ENST00000291525 PLA2R1Q13018 1463 aa27.29■■□□□ 1.96
TFF3-201ENST00000291525 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
TFF3-201ENST00000291525 PZPP20742 1482 aa27.25■■□□□ 1.95
TFF3-201ENST00000291525 A2ML1A8K2U0 1454 aa27.25■■□□□ 1.95
TFF3-201ENST00000291525 PKD2Q13563 968 aa27.24■■□□□ 1.95
TFF3-201ENST00000291525 RNF17Q9BXT8 1623 aaKnown RBP27.23■■□□□ 1.95
TFF3-201ENST00000291525 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
TFF3-201ENST00000291525 TNRQ92752 1358 aa27.22■■□□□ 1.95
TFF3-201ENST00000291525 NCKAP5LQ9HCH0 1330 aa27.2■■□□□ 1.95
TFF3-201ENST00000291525 ZC3H13Q5T200 1668 aaKnown RBP27.2■■□□□ 1.94
TFF3-201ENST00000291525 DNMT1P26358 1616 aaKnown RBP27.19■■□□□ 1.94
TFF3-201ENST00000291525 TCOF1Q13428 1488 aaKnown RBP27.19■■□□□ 1.94
TFF3-201ENST00000291525 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
TFF3-201ENST00000291525 IQSEC2Q5JU85 1478 aa27.18■■□□□ 1.94
TFF3-201ENST00000291525 PTPN23Q9H3S7 1636 aa27.17■■□□□ 1.94
TFF3-201ENST00000291525 CROCC2H7BZ55 1655 aa27.16■■□□□ 1.94
TFF3-201ENST00000291525 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
TFF3-201ENST00000291525 SHANK2Q9UPX8 1470 aa27.15■■□□□ 1.94
TFF3-201ENST00000291525 FBXO31Q5XUX0 539 aaPredicted RBP27.15■■□□□ 1.94
TFF3-201ENST00000291525 NLRP1Q9C000 1473 aa27.13■■□□□ 1.93
TFF3-201ENST00000291525 ABCC3O15438 1527 aa27.12■■□□□ 1.93
TFF3-201ENST00000291525 POLR1AO95602 1720 aaPredicted RBP27.12■■□□□ 1.93
TFF3-201ENST00000291525 FGD6Q6ZV73 1430 aa27.08■■□□□ 1.93
TFF3-201ENST00000291525 MROH1Q8NDA8 1641 aa27.08■■□□□ 1.93
TFF3-201ENST00000291525 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
TFF3-201ENST00000291525 ABCC5O15440 1437 aa27.07■■□□□ 1.92
TFF3-201ENST00000291525 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
TFF3-201ENST00000291525 UGGT1Q9NYU2 1555 aa27.06■■□□□ 1.92
TFF3-201ENST00000291525 CEP152O94986 1710 aa27.06■■□□□ 1.92
TFF3-201ENST00000291525 ZNF335Q9H4Z2 1342 aaPredicted RBP27.06■■□□□ 1.92
TFF3-201ENST00000291525 DAPK1P53355 1430 aa27.06■■□□□ 1.92
TFF3-201ENST00000291525 THEMISQ8N1K5 641 aaPredicted RBP27.05■■□□□ 1.92
TFF3-201ENST00000291525 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
TFF3-201ENST00000291525 PRDM15P57071 1507 aaPredicted RBP27.01■■□□□ 1.91
TFF3-201ENST00000291525 ERVK-7P63135 1459 aa27.01■■□□□ 1.91
TFF3-201ENST00000291525 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.91
TFF3-201ENST00000291525 NEURL4Q96JN8 1562 aa27.01■■□□□ 1.91
TFF3-201ENST00000291525 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
TFF3-201ENST00000291525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
TFF3-201ENST00000291525 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
TFF3-201ENST00000291525 DEPDC5O75140 1603 aa26.98■■□□□ 1.91
TFF3-201ENST00000291525 CFAP65Q6ZU64 1925 aaKnown RBP26.96■■□□□ 1.91
TFF3-201ENST00000291525 KANK1Q14678 1352 aa26.96■■□□□ 1.91
TFF3-201ENST00000291525 ARHGAP31Q2M1Z3 1444 aa26.94■■□□□ 1.9
TFF3-201ENST00000291525 MED14O60244 1454 aa26.93■■□□□ 1.9
TFF3-201ENST00000291525 CPS1P31327 1500 aa26.92■■□□□ 1.9
TFF3-201ENST00000291525 NPHP4O75161 1426 aaPredicted RBP26.91■■□□□ 1.9
TFF3-201ENST00000291525 IQGAP1P46940 1657 aa26.9■■□□□ 1.9
TFF3-201ENST00000291525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
TFF3-201ENST00000291525 CHIC2Q9UKJ5 165 aa26.9■■□□□ 1.9
TFF3-201ENST00000291525 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
TFF3-201ENST00000291525 UBR1Q8IWV7 1749 aa26.89■■□□□ 1.9
TFF3-201ENST00000291525 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
TFF3-201ENST00000291525 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
TFF3-201ENST00000291525 LMTK2Q8IWU2 1503 aa26.85■■□□□ 1.89
TFF3-201ENST00000291525 VWDEQ8N2E2 1590 aa26.84■■□□□ 1.89
TFF3-201ENST00000291525 SCAF11Q99590 1463 aaKnown RBP26.8■■□□□ 1.88
TFF3-201ENST00000291525 SLIT1O75093 1534 aa26.79■■□□□ 1.88
TFF3-201ENST00000291525 DISP3Q9P2K9 1392 aa26.78■■□□□ 1.88
TFF3-201ENST00000291525 PIK3C2BO00750 1634 aa26.77■■□□□ 1.88
TFF3-201ENST00000291525 ARHGAP23Q9P227 1491 aa26.77■■□□□ 1.88
TFF3-201ENST00000291525 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
TFF3-201ENST00000291525 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
TFF3-201ENST00000291525 ANKRD50Q9ULJ7 1429 aa26.76■■□□□ 1.87
TFF3-201ENST00000291525 TOM1O60784 492 aa26.76■■□□□ 1.87
TFF3-201ENST00000291525 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
TFF3-201ENST00000291525 EID1Q9Y6B2 187 aa26.75■■□□□ 1.87
TFF3-201ENST00000291525 SYNMO15061 1565 aa26.73■■□□□ 1.87
TFF3-201ENST00000291525 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
TFF3-201ENST00000291525 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.87
TFF3-201ENST00000291525 RPRD2Q5VT52 1461 aaKnown RBP26.69■■□□□ 1.86
TFF3-201ENST00000291525 TMEM2Q9UHN6 1383 aa26.69■■□□□ 1.86
TFF3-201ENST00000291525 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
TFF3-201ENST00000291525 NOS1P29475 1434 aa26.68■■□□□ 1.86
TFF3-201ENST00000291525 LTKP29376 864 aa26.68■■□□□ 1.86
TFF3-201ENST00000291525 TET3O43151 1660 aa26.66■■□□□ 1.86
TFF3-201ENST00000291525 PIP4K2BP78356 416 aa26.66■■□□□ 1.86
TFF3-201ENST00000291525 IDI1Q13907 227 aa26.66■■□□□ 1.86
TFF3-201ENST00000291525 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
TFF3-201ENST00000291525 ROCK1Q13464 1354 aa26.65■■□□□ 1.86
TFF3-201ENST00000291525 LRRC7Q96NW7 1537 aa26.65■■□□□ 1.86
TFF3-201ENST00000291525 UNC13BO14795 1591 aa26.64■■□□□ 1.86
TFF3-201ENST00000291525 SLC52A1Q9NWF4 448 aa26.64■■□□□ 1.86
TFF3-201ENST00000291525 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
TFF3-201ENST00000291525 HSPA1LP34931 641 aa26.56■■□□□ 1.84
TFF3-201ENST00000291525 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
TFF3-201ENST00000291525 IQGAP3Q86VI3 1631 aa26.54■■□□□ 1.84
TFF3-201ENST00000291525 E9PCH4 1651 aa26.51■■□□□ 1.83
TFF3-201ENST00000291525 ITGAEP38570 1179 aa26.51■■□□□ 1.83
TFF3-201ENST00000291525 ILDR2Q71H61 639 aa26.51■■□□□ 1.83
TFF3-201ENST00000291525 MYO5BQ9ULV0 1848 aa26.51■■□□□ 1.83
TFF3-201ENST00000291525 HDGFP51858 240 aaKnown RBP26.5■■□□□ 1.83
TFF3-201ENST00000291525 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
TFF3-201ENST00000291525 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
TFF3-201ENST00000291525 BCANQ96GW7 911 aa26.48■■□□□ 1.83
TFF3-201ENST00000291525 TMEM131LA2VDJ0 1609 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms